Skip to main content
Log in

Excited state dynamics of the photoconvertible fluorescent protein Kaede revealed by ultrafast spectroscopy

  • Paper
  • Published:
Photochemical & Photobiological Sciences Aims and scope Submit manuscript

Abstract

The ultrafast excited state dynamics of the fluorescent protein Kaede has been investigated by employing time resolved fluorescence and transient absorption. Upon irradiation of its neutral state, the protein undergoes an efficient conversion to a state that fluoresces at longer wavelengths. The molecular basis of the photoconversion involves an expansion of the chromophore π-conjugation by formal β-elimination but details of the reaction pathway remain subject to debate. Based on the kinetics observed in experiments on the protein sample in both H2O and D2O buffers, we suggest that a light-initiated cleavage mechanism (20 ps) could take place, forming the neutral red state in which the red chromophore resides. Excitation of the neutral red form results in the formation of the red anionic species via two Förster resonance energy transfer (FRET) channels. FRET between red neutral and red anionic forms occurs within the tetramer with time constants of 13.4 ps and 210 ps. In contrast to literature proposals no ESPT was observed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. A. Miyawaki, Nat. Biotechnol., 2004, 22, 1374–1376.

    Article  CAS  Google Scholar 

  2. K. A. Lukyanov, D. M. Chudakov, S. Lukyanov, V. V. Verkhusha, Nat. Rev. Mol. Cell Biol., 2005, 6, 885–891.

    Article  CAS  Google Scholar 

  3. J. Lippincott-Schwartz, N. Altan-Bonnet, G. H. Patterson, Nat. Cell Biol., 2003, S7–S14.

    Google Scholar 

  4. R. Ando, H. Mizuno, A. Miyawaki, Science, 2004, 306, 1370–1373.

    Article  CAS  Google Scholar 

  5. M. Andresen, A. C. Stiel, J. Folling, D. Wenzel, A. Schonle, A. Egner, C. Eggeling, S. W. Hell, S. Jakobs, Nat. Biotechnol., 2008, 26, 1035–1040.

    Article  CAS  Google Scholar 

  6. R. Ando, H. Hama, M. Yamamoto-Hino, H. Mizuno, A. Miyawaki, Proc. Natl. Acad. Sci. U. S. A., 2002, 99, 12651–12656.

    Article  CAS  Google Scholar 

  7. J. Fuchs, S. Bohme, F. Oswald, P. N. Hedde, M. Krause, J. Wiedenmann, G. U. Nienhaus, Nat. Methods, 2010, 7, 627–U635.

    Article  CAS  Google Scholar 

  8. V. Adam, M. Lelimousin, S. Boehme, G. Desfonds, K. Nienhaus, M. J. Field, J. Wiedenmann, S. McSweeney, G. U. Nienhaus, D. Bourgeois, Proc. Natl. Acad. Sci. U. S. A., 2008, 105, 18343–18348.

    Article  CAS  Google Scholar 

  9. V. Adam, B. Moeyaert, C. C. David, H. Mizuno, M. Lelimousin, P. Dedecker, R. Ando, A. Miyawaki, J. Michiels, Y. Engelborghs, J. Hofkens, Chem. Biol., 2011, 18, 1241–1251.

    Article  CAS  Google Scholar 

  10. T. Sato, M. Takahoko, H. Okamoto, Genesis, 2006, 44, 136–142.

    Article  CAS  Google Scholar 

  11. S. Aramaki, K. Hatta, Dev. Dyn., 2006, 235, 2192–2199.

    Article  CAS  Google Scholar 

  12. T. Mutoh, T. Miyata, S. Kashiwagi, A. Miyawaki, M. Ogawa, Exp. Neurol., 2006, 200, 430–437.

    Article  CAS  Google Scholar 

  13. V. Adam, H. Mizuno, A. Grichine, J. I. Hotta, Y. Yamagata, B. Moeyaert, G. U. Nienhaus, A. Miyawaki, D. Bourgeois, J. Hofkens, J. Biotechnol., 2010, 149, 289–298.

    Article  CAS  Google Scholar 

  14. T. Grotjohann, I. Testa, M. Leutenegger, H. Bock, N. T. Urban, F. Lavoie-Cardinal, K. I. Willig, C. Eggeling, S. Jakobs, S. W. Hell, Nature, 2011, 478, 204–208.

    Article  CAS  Google Scholar 

  15. E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, H. F. Hess, Science, 2006, 313, 1642–1645.

    Article  CAS  Google Scholar 

  16. S. T. Hess, T. P. K. Girirajan, M. D. Mason, Biophys. J., 2006, 91, 4258–4272.

    Article  CAS  Google Scholar 

  17. H. Mizuno, M. Abe, P. Dedecker, A. Makino, S. Rocha, Y. Ohno-Iwashita, J. Hofkens, T. Kobayashi, A. Miyawaki, Chem. Sci., 2011, 2, 1548–1553.

    Article  CAS  Google Scholar 

  18. T. Brakemann, A. C. Stiel, G. Weber, M. Andresen, I. Testa, T. Grotjohann, M. Leutenegger, U. Plessmann, H. Urlaub, C. Eggeling, M. C. Wahl, S. W. Hell, S. Jakobs, Nat. Biotechnol., 2011, 29, 942–U132.

    Article  CAS  Google Scholar 

  19. H. Mizuno, T. K. Mal, K. I. Tong, R. Ando, T. Furuta, M. Ikura, A. Miyawaki, Mol. Cell, 2003, 12, 1051–1058.

    Article  CAS  Google Scholar 

  20. K. Nienhaus, G. U. Nienhaus, J. Wiedenmann, H. Nar, Proc. Natl. Acad. Sci. U. S. A., 2005, 102, 9156–9159.

    Article  CAS  Google Scholar 

  21. I. Hayashi, H. Mizuno, K. I. Tong, T. Furuta, F. Tanaka, M. Yoshimura, A. Miyawaki, M. Ikura, J. Mol. Biol., 2007, 372, 918–926.

    Article  CAS  Google Scholar 

  22. H. Tsutsui, H. Shimizu, H. Mizuno, N. Nukina, T. Furuta, A. Miyawaki, Chem. Biol., 2009, 16, 1140–1147.

    Article  CAS  Google Scholar 

  23. X. Li, L. W. Chung, H. Mizuno, A. Miyawaki, K. Morokuma, J. Phys. Chem. B, 2010, 114, 16666–16675.

    Article  CAS  Google Scholar 

  24. M. Lelimousin, V. Adam, G. U. Nienhaus, D. Bourgeois, M. J. Field, J. Am. Chem. Soc., 2009, 131, 16814–16823.

    Article  CAS  Google Scholar 

  25. R. Y. Tsien, Annu. Rev. Biochem., 1998, 67, 509–544.

    Article  CAS  Google Scholar 

  26. H. Hosoi, H. Mizuno, A. Miyawaki, T. Tahara, J. Phys. Chem. B, 2006, 110, 22853–22860.

    Article  CAS  Google Scholar 

  27. E. Fron, C. Flors, G. Schweitzer, S. Habuchi, H. Mizuno, R. Ando, F. C. De Schryver, A. Miyawaki, J. Hofkens, J. Am. Chem. Soc., 2007, 129, 4870–4871.

    Article  CAS  Google Scholar 

  28. E. Fron, M. Van der Auweraer, B. Moeyaert, J. Michiels, H. Mizuno, J. Hofkens, V. Adam, Revealing the Excited-State Dynamics in the Fluorescent Protein Dendra2, J. Phys. Chem. B, 2013, 117, 2300–2313.

    Article  CAS  Google Scholar 

  29. C. Fang, R. R. Frontiera, R. Tran, R. A. Mathies, Nature, 2009, 462, 200–204.

    Article  CAS  Google Scholar 

  30. A. R. Horrocks, A. Kearvell, K. Tickle, F. Wilkinso, Trans. Faraday Soc., 1966, 62, 3393–3399.

    Article  CAS  Google Scholar 

  31. D. Yarbrough, R. M. Wachter, K. Kallio, M. V. Matz, S. J. Remington, Proc. Natl. Acad. Sci. U. S. A., 2001, 98, 462–467.

    Article  CAS  Google Scholar 

  32. M. Chattoraj, B. A. King, G. U. Bublitz, S. G. Boxer, Proc. Natl. Acad. Sci. U. S. A., 1996, 93, 8362–8367.

    Article  CAS  Google Scholar 

  33. T. B. McAnaney, E. S. Park, G. T. Hanson, M. E. P. Rende, S. J. Remington, S. G. Boxer, Biophys. J., 2002, 82, 314a–314a.

    Google Scholar 

  34. S. R. Meech, Chem. Soc. Rev., 2009, 38, 2922–2934.

    Article  CAS  Google Scholar 

  35. M. Maus, E. Rousseau, M. Cotlet, G. Schweitzer, J. Hofkens, M. Van der Auweraer, F. C. De Schryver, A. Krueger, Rev. Sci. Instrum., 2001, 72, 36–40.

    Article  CAS  Google Scholar 

  36. D. R. Lide, CRC Handbook of Chemistry and Physics, CRC Press, Boca Raton, FL, 1992.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Hideaki Mizuno.

Additional information

Electronic supplementary information (ESI) available: Experimental details and additional results are presented. See DOI: 10.1039/c3pp50335f

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Fron, E., Sliwa, M., Adam, V. et al. Excited state dynamics of the photoconvertible fluorescent protein Kaede revealed by ultrafast spectroscopy. Photochem Photobiol Sci 13, 867–874 (2014). https://doi.org/10.1039/c3pp50335f

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1039/c3pp50335f

Navigation