Non-contact electrochemical evaluation of biofilms

Here, we demonstrate a non-contact technique for electrochemical evaluation of biofilms on surfaces in relation to corrosion. Electrochemical impedance spectrometry was employed, incorporating flat patterned electrodes positioned over the surfaces of aluminum and glass with and without biofilms. Signal communication from the working electrode to the counter electrode followed electric field lines passing tangentially through the biofilms. Electrochemical impedance parameters that were evaluated included complex impedance, phase angle, imaginary (out of phase) conductivity and Cole–Cole plots with a corresponding equivalent circuit. Changes in the impedance properties due to the presence of biofilms were monitored and correlated through microbiological, chemical and electrochemical assays. Impedance parameters associated with microbial activity correlated with biofilms on aluminum and glass surfaces. This technical approach provides impedance information about the biofilm without the signal traveling through the underlying conductive media or disrupting the biofilm. In this way, biological contributions to surface fouling can be evaluated with minimal contribution from the inorganic surface under the biofilm. In addition, this technique can be used to monitor biofilms on electrochemically inert surfaces as well as electrically conductive surfaces.


Introduction
Microbially influenced corrosion (MIC) can significantly deviate from predictable changes that metals would otherwise undergo during classically defined inorganic corrosion [1] because biofilms induce changes to electrochemical conditions at the metal/solution interface. These changes are difficult to predict due to variations of microbial populations and growth conditions from one location to another. Numerous techniques have been applied to studying MIC. Especially useful are electrochemical techniques for evaluation of corrosion effects on materials and include measurement of redox potential or corrosion potential, electrochemical noise analyses, electrochemical impedance spectrometry (EIS), polarization resistance and cyclic voltammetry [2]. MIC is typically investigated using conventional electrochemical techniques to measure the current and voltage applied directly to the surface or techniques like pitting scans and potentiostatic and potentiodynamic polarization curves to provide useful mechanistic information on corrosion parameters. These methods generally cause irreversible changes to the surfaces from physical contact and large-signal polarizations. A technique that preserves the integrity of the biofilm would broaden the available options for suppressing and detecting MIC. Recently, Tanaka et al. [3] described a non-contact method for the in situ detection of biofilms through the determination of biofilm hydrophobicity, which offers potential in determining surface changes for the development of antimicrobial materials. In this work, we report a non-contact EIS method using commercially available patterned electrodes to measure MIC on surfaces.
This work was motivated by the concept that a fielddeployable, in situ EIS evaluation of MIC could provide a remote, non-contact method to aid in determining the status of systems undergoing MIC. As an example, commercial used nuclear fuel is stored under water in cooling basins until its radioactivity is low enough for dry storage [4], permanent disposal or reprocessing [5]. Aluminum clad fuel makes up a significant portion of the fuel in storage across the USA, and the presence of MIC on the integrity of the fuel cladding material is of particular interest considering that the fuel has or is expected to exceed its anticipated time spent in storage [6][7][8]. Despite the low nutrient availability of the purified water maintained in nuclear cooling pools, microbial activity has been reported along with biofilm formation and MIC [5][6][7][8][9] and is associated with diverse bacterial phyla including Proteobacteria, Nitrospirae, Deinococcus-Thermus, Sphingobacteria, Actinobacteria and Planctomyces [9]. The growth and survival of mixed species of typical air-borne soil bacteria as biofilms on cladding material exposed to 2 Gy/h (total dose 4.9 × 10 3 Gy) [8] demonstrate that radiation does not prevent biofilm formation in these environments. More recent work indicates that storage basins are complex, dynamic systems, in which chemical, biological and physical conditions vary spatially and evolve temporally, thereby demonstrating a need to reevaluate corrosion surveillance programs in nuclear storage basins [9].
Cooling water in nuclear storage basins is typically monitored for microbial activity to provide some measure of the probability of MIC formation on cladding material. Although aquatic microbial populations that are suspended in the water are not a good indicator of nearby biofilm development and activity [1,10] including on cladding material [7], at present it is logistically impractical to monitor fuel assemblies directly for biofilm activity.
Electrochemical techniques, including EIS, provide useful information regarding metal corrosion behavior and associated biofilm activity on surfaces. Microbial biofilms in the subsurface have been monitored previously with electrochemical impedance techniques [11][12][13] without physically contacting the biofilms. Impedance analysis of biofilms provides a data-rich platform with parameters associated with microbial activity. For instance, the complex impedance (IZI) and phase angle (φ) are influenced by lipid membranes [14,15]. In addition, imaginary (out of phase) conductivity (σ″) and dielectric permittivity (ɛ) are associated with biofilm formation [11,13] and microbial activity [16,17]. Hence, bacterial biofilms influence electric double-layer interactions on the surfaces to which they are attached [18] and have an effect on double-layer capacitance as determined with EIS [19,20].
As a result, a non-contact approach to monitor mature biofilms on aluminum surfaces was investigated. To avoid surface contact, flat patterned electrodes were positioned at a predetermined distance parallel to biofilm surfaces. Signal communication from the working electrode (WE) to the counter electrode (CE) followed electric field lines passing tangentially [21] through the biofilms. Changes in the impedance properties due to the presence of biofilms were monitored and correlated with MIC.

Microbial cultures
Water samples from near the top surface of aluminum fuel rod storage canisters (Savannah River Site, Aiken, SC) were obtained and stored at 4 °C for 24 h prior to microbiological characterization. Pure cultures were isolated with conventional culturing methods by streaking to isolation on R2A plating medium. Pure cultures were then maintained on tryptic soy agar (TSA) or broth (TSB).
Pure colonies were suspended in a 5% Chelex 100 resin solution and boiled for 10 min to lyse bacterial cells. Cell debris was pelleted by centrifugation (6000×g, 1 min), and DNA quality and quantity were evaluated using a Nan-oDrop spectrophotometer. The 16S ribosomal RNA subunit gene was PCR-amplified using universal bacterial primers (27G/1492R, E. coli numbering) and conventional thermal cycling. Amplification accuracy and specificity were assessed by gel electrophoresis, and the products were purified by alcohol precipitation in high salt. The purified PCR products were suspended in 10 µL of ddH 2 O for DNA sequencing. The sequences were trimmed to remove weak and ambiguous base calls in Sequencher (v 4.8), and the remaining > 400 bp partial rrn gene sequences were queried against the NCBI and RDP databases for putative identification. All IDs were confirmed by having > 99% sequence identity to authentic gene sequences available in both sequence databases. Three cultures dominated the sample and were rod-shaped, mesophilic heterotrophs identified as a Gram-negative, non-spore-forming facultative anaerobe, Serratia marcescens; a Gram-negative, non-spore-forming aerobe, Delftia acidovorans; and a Gram-positive, facultative anaerobic spore former, Bacillus thuringiensis.

Biofilm growth
For proof of principle that this technique can be used to detect and monitor biofilms, glass slides were chosen as an inert surface. Shewanella oneidensis MR-1, a well-characterized bacterium often associated with biofilms and corrosion, was chosen in this portion of the study. Cultures were grown in 50 mL of TSB in the presence of clean, sterile glass slides for 1 week at 28 °C. The duplicate cultures produced a confluent biofilm on the glass surfaces (as determined with light microscopy) resulting in 16.1 μg/cm 2 (± 2.4 μg/ cm 2 ) of bacterial protein.
Cultures of S. marcescens, D. acidovorans and B. thuringiensis were grown in TSB, in triplicate, at 28 °C for 24 h followed by inoculation (10%/vol) into 10% TSB as described previously [8] in the presence of sterile aluminum coupons. Coupons were individually numbered (engraved) on the one side with incubation of the coupons occurring horizontally, with the numbered side down. The cultures and sterile controls were maintained for 6 weeks with the medium refreshed weekly.
Coupons of 1100 aluminum alloy (99.0% Al) were chosen because this alloy is identical to the cladding surface of many types of fuels and fuel storage materials contained in the U.S. DOE, Savannah River Site storage facilities. The coupons were 4.0 cm in diameter and produced by centerless grinding (Metal Samples Co., Munford, AL). Prior to analysis, all coupons (with or without biofilms) were rinsed in sterile 50 mM phosphate-buffered saline (PBS) three consecutive times to remove unattached bacteria [22].

Instrumentation
All electrochemical studies were performed on a fourchannel potentiostat, VersaSTAT MC (Princeton Applied Research, Princeton, NJ) with data recorded via VersaStudio software version 2.42.3.

Electrode configuration
Flat patterned electrodes (Pine Instruments, Grove City, PA) consisted of 2-mmdiameter graphite WE surrounded on three sides by a graphite CE with an Ag/AgCl reference electrode. Electrodes were fitted to a solid support (glass slide) to provide extra rigidity. With the electrodes facing out, they were positioned above and parallel to surfaces for noncontact evaluation of surface biofilms using 3-mm-thick Flat patterned electrode was positioned parallel to the surface of interest. Surface biofilm was probed during communication between working and counter electrodes. The electrode was positioned 3 mm from the surface being analyzed using chemically inert septa placed so as to not interrupt the signal to the counter electrode chemically inert septa (Reztech, Tempe, AZ) (Fig. 1). The septa were arranged to maintain a constant distance between surfaces but not to interfere with signals. Signal communication from the WE to the CE followed electric field lines passing tangentially over surfaces studied, including biofilms [21].

EIS analysis
Immediately prior to EIS analysis, all coupons (with or without biofilms) were rinsed in sterile 50 mM phosphatebuffered saline (PBS) three consecutive times to remove suspended bacteria not part of a biofilm. All EIS analyses were conducted in PBS to minimize any effects from the diffusion of microbial metabolites. EIS measurements were carried out at open-circuit potential with a sinusoidal signal perturbation of 50 mV, with a frequency range of 10 5 -10 −2 Hz. Ten measurements were recorded per decade of frequency with a measurement delay of 2 s. Data were analyzed with ZView software (Scribner Associates, Southern Pines, NC). EIS was performed immediately following three cycles of voltammetric stripping and conditioning of the electrode (− 2 to + 2 V: 1 V/s). Data were evaluated as Bode plots, i.e., phase (φ) plots. Imaginary conductivity (σ″) was also determined where σ″ is defined as with Y ′′ defined as imaginary admittance: where d = distance between the electrodes and a = effective area of the electrode.
The complex dielectric function [13] was presented as Cole-Cole plots where real (ε′) permittivity and imaginary (ε″) permittivity are defined as follows: where ω = angular frequency and C 0 = capacitance of an empty cell.

Potentiodynamic characterization
Electrochemical polarization (Tafel) curves were performed by scanning the potential from − 800 to − 400 mV with Ag/AgCl reference with identical, clean Al 1100 coupons as counter electrodes with a sweep rate of 1 mV/s.

Microscopic analysis
Confirmation of biofilms on surfaces was determined by acridine orange staining using an epifluorescence microscope [23]. Scanning electron microscopy (SEM) and energy-dispersive X-ray spectroscopy (EDS) measurements were performed using a Hitachi TM3000 SEM equipped with a Bruker Quantax EDS detector. The samples were mounted on an aluminum stub with carbon tape and were not coated. The instrument uses an automatically controlled backscattered detector to achieve topographical information in addition to the phase-contrast information. The EDS detector was calibrated with Cu standard prior to measurements.

Biofilm removal and analysis
Following EIS analysis, surfaces with biofilms and Al coupons (controls) were placed in sterile 100-mL beakers and sonicated individually for 30 min in 50 mL of sterile PBS. The biofilm-free Al coupons were then rinsed and used in potentiodynamic studies. The dislodged biofilms were then concentrated via centrifugation and assayed for protein. A portion of biomass from Al coupons was prepared for Al determinations using EDS.

Protein determinations
Sonicated, pelleted cells were re-suspended in 800 µL of PBS for protein measurement with DC Protein Assay (Bio-Rad Cat. # 500-0112) to quantify biofilm densities on Al coupons. Reagents were prepared as described by the kit manual. Colorimetric changes were measured using a Synergy H4 Multi-Mode Reader (BioTek). Data were analyzed using Gen5 Data Analysis Software (BioTek) and plotted in Microsoft Excel.

EIS analysis of bacterial biofilms on glass
Seven-day-old confluent biofilms of S. oneidensis MR-1 on glass slides contained 16.1 μg/cm 2 (± 2.4 μg/cm 2 ) of bacterial protein when EIS analysis occurred. EIS analysis was conducted with flat patterned electrodes without physically contacting the biofilm. Figure 2 demonstrates the comparisons of the rinsed biofilms in 50 mM PBS to that of clean glass slides. The biofilms demonstrated a decrease in overall impedance (IZI) below 2 kHz (Fig. 2a). The increase in biomass on the slides (relative to pristine glass) resulted in a phase shift (Fig. 2b). Background subtraction of the data from the pristine glass control (Δφ) showed a peak at 1 kHz and is indicative of the increased presence of lipid membranes [14,15]. The imaginary conductivity (σ″) of the biofilms exhibited a peak at 1.26 kHz compared to 2.51 kHz, which was measured under control conditions (Fig. 2c), and is consistent with the presence of attached biofilms, with increased Δσ″ indicative of increased microbial biomass [11][12][13].

EIS analysis of bacterial biofilms on aluminum coupons
Rinsed aluminum coupons containing 42-day-old biofilms were compared to sterile, clean aluminum coupons using EIS. Biofilms were determined by AO staining and fluorescence microscopy (Fig. 3). The degree of biofilm growth of the three pure cultures varied throughout the experiments (Table 1) with heterogeneous thickness calculated via confocal microscopy and ranging from 5 to 20 μm. Cultures of S. marcescens and D. acidovorans demonstrated the greatest amount of biofilm formation ( Table 1). The Bode plot of biofilms from these two cultures exhibited decreased impedance at frequencies lower than 10 kHz, relative to sterile control coupons (Fig. 4a, b). This was similar to S. oneidensis MR-1 data on glass (Fig. 2). When the biofilms on aluminum were removed through sonication, impedance values were restored back to those of controls or somewhat higher, indicating that biofilms played a significant role in lowering the impedance of the aluminum coupons. B. thuringiensis was detected at relatively low biofilm density on coupons (Table 1), and there is no detectable difference in overall impedance relative to controls (Fig. 4c). Removal of biofilms from this culture (through sonication) did not change impedance values. S. marcescens and D. acidovorans cultures on aluminum coupons also influenced the phase angle between 10 5 and 10 2 Hz (Fig. 5a, b) and were similar to that of S. oneidensis MR-1 on glass (Fig. 2b). The minimal growth of B. thuringiensis, however, provided a minimal contribution to Δφ (Fig. 5c). A slight increase in the peak height of Δφ was also seen between 10 and 0.1 Hz with S. marcescens and D. acidovorans on aluminum (Fig. 5a, b) but was not detected with biofilms on glass (Fig. 2b). The presence of aluminum associated with cellular biomass (Table 1) and the ability of aluminum oxides to effect φ between 10 and 0.1 Hz [24] prompted the evaluation of aluminum oxide with our technique. Figure 6 demonstrates Δφ of Al 2 O 3 on glass with increased Δφ between 10 and 0.1 Hz, suggesting that Al 2 O 3 associated with biofilms could contribute to Δφ at the lower frequencies.
Biofilms of S. marcescens and D. acidovorans were associated with σ″ peak values that were shifted to lower frequencies by over 1 kHz and 2 kHz, respectively (Fig. 7a, b). The sonicated coupons had similar σ″ peak values to that of controls (Fig. 7a, b). The σ″ peak value for D. acidovorans was higher than controls and likely indicates a biofilmassociated chemical change to the coupon (Fig. 7b). The low biofilm density of B. thuringiensis did not demonstrate Biofilms on glass and glass slides alone were analyzed for IZI (a), phase shift relative to sterile glass controls (Δφ) (b) and imaginary conductivity (σ″) (c) with a relative difference (Δσ″) between control and biofilm, below about 0.5 kHz (inset) any changes to σ″ peak values before or after sonication (data not shown). Increased values for Δσ″ are indicative of increased microbial biomass [11][12][13].
Permittivity values were reported as Cole-Cole plots and modeled with the circuit in Fig. 8. The presence of biofilms on glass demonstrated differences in permittivity relative to sterile controls at the lower frequencies ( Fig. 9a). At the higher frequencies, biofilms demonstrated increased double-layer capacitance, based on the increase in diameter of the semicircle (Fig. 9a,  inset). At the lower frequencies, the Cole-Cole plot of biofilm on glass corresponds to the diffusion of the signal into the biofilm as opposed to the limited diffusion exhibited by the glass only (Fig. 9a). Cole-Cole  plots demonstrated a greater difference in permittivity between biofilms on Al coupons and sterile controls (Fig. 9b). Overall permittivity associated with biofilms of S. marcescens and D. acidovorans cultures was diminished compared to sterile aluminum controls.

Potentiodynamic analysis
Biofilms produced by the three cultures grown on aluminum demonstrated changes to exchange currents (I o ) compared to sterile controls ( Fig. 10 and Table 1) with D. acidovorans and S. marcescens biofilms were also associated with a decrease in E ocp ( Fig. 10 and Table 1).  Equivalent circuit used to fit the data where R1 represents the electrolyte resistance at high frequency and CPE1 and R2 represent a constant phase element and charge transfer resistance, respectively, at lower to medium frequencies, with CPE2 and R3 representing a constant phase element and a modification of the charge transfer resistance, respectively, at low to high frequencies

Discussion
Evaluation of biofilms in many environments presents numerous logistical and technical challenges due to the location of the biofilms and/or their existence under harsh conditions such as high levels of ionizing radiation.
Here, we demonstrated a non-optimized, electrochemical approach that provides a potential technique for remote, in situ, non-contact monitoring of biofilms growing on electrically conductive or inert surfaces. Surfaces evaluated in this study were glass and aluminum 1100. This aluminum alloy is used in parts of the nuclear industry. Glass was used to demonstrate the principle of non-contact biofilm analysis on surfaces, especially since glass surfaces would not produce corrosive by-products normally associated with metal biocorrosion processes. Therefore, changes in the EIS response on glass would be related solely to biofilm growth. S. oneidensis MR-1 produces thick, three-dimensional biofilms when grown aerobically [25], and in the present study biofilms on glass demonstrated decreased impedance (IZI) below 2 kHz compared to glass alone. This was directly related to the presence of biofilms, especially the production of extracellular polymeric substances (EPS). EPS are used by microbes to adhere to surfaces and also impart conductive properties [26][27][28]. Increased conductivity from EPS likely played a role in the present study by decreasing impedance (IZI) at the lower frequencies.
S. oneidensis MR-1 biofilms also demonstrated increased Δφ with a peak around 1 kHz, indicative of a biofilm and consistent with previous studies. For instance, the buildup of an organic film on mild steel [29] as well as biofilms on stainless steel [30] and mild steel [31] was detected in the change in the phase angle shift as a function of film thickness. The membrane lipid bilayer of microbial cells allows the cells to interact electrochemically [32], and when evaluated with EIS, lipid membranes and peptides contribute to a phase shift [14,15].
Microbial adhesion to surfaces, biofilm thickness and increased cell density all affect σ″ values, with a strong bias to living cells [12]. Abdel Aal et al. [11] defined σ″ to represent the polarization (energy storage) term and demonstrates increased σ″ values during microbial growth studies. The present study demonstrated that Shewanella biofilms increased the magnitude of σ″ relative to controls in the frequency range of about 10 Hz to 1 kHz. The biofilms also caused a > 1 kHz shift in the σ″ peak from 2510 to 1260 Hz. This peak shift could be due to chemical bonds associated with microbial adhesion. Changes in imaginary conductivity (Δσ″) are associated with increased microbial biomass [11][12][13] and were detected in these studies as well.
The same technique as above was also used to monitor biofilms grown on aluminum coupons and produced similar results. The cultures isolated from nuclear cooling basins all grew on Al coupons with S. marcescens and D. acidovorans, demonstrating the most biofilm production and the strongest EIS responses. These species have previously been shown to cause biocorrosion on metal surfaces as biofilms [33,34]. Responses to EIS analysis by B. thuringiensis were minimal, likely due to the low bacterial densities of biofilms in these studies. Overall, the greater the cell density (protein content), the more pronounced were the EIS responses, indicating that this technique offers potential for non-contact evaluation of biofilms.
Similar to S. oneidensis MR-1 biofilms on glass, S. marcescens and D. acidovorans biofilms on aluminum demonstrated decreased impedance. Decreased IZI also resulted from biofilms grown on stainless steel [26]. S. marcescens and D. acidovorans biofilms also demonstrated increased Δφ at about 1 kHz, increased Δσ″ (below 1 kHz) and a shift in σ″ peak height by more than 1 kHz. The σ″ peak shifted back to higher frequencies after removal of the biofilms via sonication, indicating that the presence of the biofilms contributed to this phenomenon. The shift in the peak of σ″ is of interest and may be a result of surface interactions by the biofilm. The σ″ peak for sonicated coupons that had D. acidovorans biofilms were higher and narrower, indicating that the coupon surface changed as a result of biofilm sonication.
The influence of microbial activity on dielectric permittivity and double-layer capacitance was demonstrated here with biofilms on glass and aluminum. At the higher frequencies, biofilms on glass demonstrated greater double-layer capacitance than that of clean, sterile glass. Living bacterial cells increase permittivity values due to cell Fig. 10 Potentiodynamic polarization curves of Al coupons following 6 weeks of biofilm growth. Biofilms were removed through sonication and compared to sonicated sterile controls density, cell surface charge and metabolic activity [16] as was evident here, especially since glass is electrochemically inert. Low-frequency data of the biofilm on glass corresponded to the diffusion of the signal through the biofilm as compared to the limited diffusion exhibited by the glass. A decrease in double-layer capacitance was detected with mature biofilms on aluminum coupons relative to the sterile coupons. The decrease in this case corresponds to other studies of biofilms on conductive surfaces, such as metals, and relates to the biofilm density decreasing the overall double-layer capacitance, relative to surface properties without a biofilm.
The increase in Δφ at the lower frequency range could indicate the presence of Al oxides as previously described [24] and correlates with biofilm density and biofilm-associated Al dissolution. The potentiodynamic analysis also demonstrated biofilm-associated changes in the surface and corrosion behavior of the Al coupons. Although B. thuringiensis had a higher percentage of Al associated with biomass, the low biomass density likely contributed to the minimal change in phase shift from 1 and 0.01 Hz.
Interactions between bacterial biofilms and surfaces are complex and dynamic. Here, we demonstrated a novel technique that can be used to study the electrochemical dynamics of biofilms without physically damaging the biofilm through sampling. One advantage is the ability to more easily study biofilms on inert surfaces. More complex studies can be performed with this technique, such as the electrochemical behavior of bacterial growth dynamics relative to biofilm growth and the role of diffusion as it relates to biofilm dynamics. This approach to biofilm analysis also provides opportunities to study biofilms in situ, in real time.

Conclusions
Previous EIS evaluations of biofilms were restricted to electrochemically conductive surfaces, where the biofilmcontaining surface was the working electrode. Here, we demonstrate a non-contact technique used to evaluate surfaces for biofilms related to MIC. Potential advantages to this approach include a technique that does not physically disturb a biofilm and a way to monitor biofilms on electrochemically inert surfaces as well as metal surfaces.
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