Abstract
A reliable and efficient method for isolating Annona squamosa L. genomic DNA, free from polyphenols and polysaccharides has been developed. Different methods involving use of CTAB and SDS with or without modifications were used. A CTAB based extraction method which uses diatomite to remove polyphenols and polysaccharides proved to be the best. This method allowed recovery of good quality DNA in sufficient quantity suitable for complete digestion by restriction endonucleases and amplifiable in polymerase chain reaction as compared to other methods.
Abbreviations
- CTAB:
-
Cetyl trimethylammonium bromide
- TE buffer:
-
Tris EDTA Buffer
- EDTA:
-
Ethylenediaminetetraacetic acid
- RAPD:
-
Random Amplified Polymorphic DNA
References
Arbi G, Naceur B, Chokri M, Mohamed B, Mohamed N (2009) A simple, rapid and efficient method for the extraction of genomic DNA from Allium roseum L. (Alliaceae). African J Biotech 8:4020–4024
Dellaporta S, Wood J, Hicks J (1983) A plant DNA minipreparation, Ver. II. Plant Mol Bio Rep 1:19–21
Gilmore S, Weston PH, Thomson A (1993) A simple, rapid inexpensive and widely applicable technique for purifying Plant DNA. Aus Syst Bot 6:139–148
Haque I, Bandopadhyay R, Mukhopadhyay K (2008) An optimized protocol for fast genomic DNA isolation from high secondary metabolites and gum containing plants. Asian J Plant Sci 7(3):304–308
Manning K (1991) Isolation of nucleic acids from plants by differential solvent precipitation. Anal Biochem 195:45–50
Michiels A, Van den Ende W, Tucker M, Van Riet L, Van Laere A (2003) Extraction of high quality genomic DNA from latex containing plants. Anal Biochem 315:85–89
Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight DNA. Nucleic Acids Res 8:4321–4325
Porebski S, Bailey LG, Baum BR (1997) Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Mol Biol Rep 15:8–15
Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc Natl Acad Sci USA 81:8014–8018
Storchova H, Hridickova R, Chtrek J, Tetera M, Fitze D, Fehrer J (2000) An improved method of DNA isolation from plants collected in the field and conserved in saturated NaCl/CTAB solution. Taxon 49:79–84
Williams JGK, Kubelik AR, Livak KJ, Rafaski JA, Tingey SV (1990) DNA polymorphism amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531–6535
Acknowledgement
The financial support provided to the first author, Rakhi Nagori, under the Women Scheme - A by DST, New Delhi, is gratefully acknowledged.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Nagori, R., Purohit, S.D. An improved method for DNA isolation from polyphenols rich leaf samples of Annona squamosa L.. J. Plant Biochem. Biotechnol. 21, 140–143 (2012). https://doi.org/10.1007/s13562-011-0075-0
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s13562-011-0075-0