Skip to main content
Log in

Distribution of segmental chromosomal alterations in neuroblastoma

  • Research Article
  • Published:
Clinical and Translational Oncology Aims and scope Submit manuscript

Abstract

Background

Neuroblastoma (NB) is a heterogeneous tumor with extremely diverse prognosis according to clinical and genetic factors such as specific combinations of chromosomal imbalances.

Methods

Molecular karyotyping data from a national neuroblastic tumor database of 155 NB samples were analyzed and related to clinical data.

Results

Segmental chromosomal alterations (SCA) were detected in 102 NB, whereas 45 only displayed numerical alterations. Incidence of SCA was higher in stage M (92%) and MYCN amplified (MNA) NB (96%). Presence of SCA was associated with older age, especially 1q gain and 3p deletion. 96% of the deaths were observed in the SCA group and 85% of the relapsed NB contained SCA. The alteration most commonly associated with a higher number of other segmental rearrangements was 11q deletion, followed by 4p deletion. Whole-chromosome 19 gain was associated with lower stages, absence of SCA and better outcome.

Conclusions

SCA are not randomly distributed and are concentrated on recurrent chromosomes. The most frequently affected chromosomes identify prognostic factors in specific risk groups. SCA are associated with older age and MNA. We have identified a small subset of patients with better outcome that share whole-chromosome 19 numeric gain, suggesting its use as a prognostic biomarker in NB.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  1. Mlakar V, Jurkovic Mlakar S, Lopez G, Maris JM, Ansari M, Gumy-Pause F. 11q-del in NB: a review of biological and clinical implications. Mol Cancer. 2017;16(1):114.

    Article  Google Scholar 

  2. Colon NC, Chung DH. Neuroblastoma. Adv Pediatr. 2011;58(1):297–311. https://doi.org/10.1016/j.yapd.2011.03.011.

    Article  PubMed  PubMed Central  Google Scholar 

  3. Schleiermacher G, Janoueix-Lerosey I, Ribeiro A, Klijanienko J, Couturier J, Pierron G, et al. Accumulation of segmental alterations determines progression in neuroblastoma. J Clin Oncol. 2010;28(19):3122–30.

    Article  Google Scholar 

  4. Defferrari R, Mazzocco K, Ambros IM, Ambros PF, Bedwell C, Beiske K, et al. Influence of segmental chromosome abnormalities on survival in children over the age of 12 months with unresectable localized peripheral neuroblastic tumors without MYCN amplification. Br J Cancer. 2015;112:290–5.

    Article  CAS  Google Scholar 

  5. European Low and Intermediate Risk Neuroblastoma Protocol (LINES 2009). ClinicalTrials.gov Identifier: NCT01728155.

  6. Szewczyk K, Wieczorek A, Mlynarski W, Janczar S, Woszczyk M, Gamrot Z, et al. Unfavorable outcome of neuroblastoma in patients with 2p gain. Front Oncol. 2019;9:1018.

    Article  Google Scholar 

  7. Pezzolo A, Rossi E, Gimelli S, Parodi F, Negri F, Conte M, et al. Presence of 1q gain and absence of 7p gain are new predictors of local or metastatic relapse in localized resectable neuroblastoma. Neuro-oncology. 2009;11:192–200.

    Article  CAS  Google Scholar 

  8. Attiyeh EF, London WB, Mossé YP, Wang Q, Winter C, Khazi D, et al. Chromosome 1p and 11q-dels and outcome in NB. N Engl J Med. 2005;353:2243–53.

    Article  CAS  Google Scholar 

  9. Caron H, van Sluis P, de Kraker J, Bokkerink J, Egeler M, Laureys G, et al. Allelic loss of chromosome 1p as a predictor of unfavorable outcome in patients with neuroblastoma. N Engl J Med. 1996;334(4):225–30.

    Article  CAS  Google Scholar 

  10. Spitz R, Hero B, Ernestus K, Berthold F. Deletions in chromosome arms 3p and 11q are new prognostic markers in localized and 4s neuroblastoma. Clin Cancer Res. 2003;9(1):52–8.

    CAS  PubMed  Google Scholar 

  11. Cohn SL, Pearson ADJ, London WB, Monclair T, Ambros PF, Brodeur GM, et al. The International Risk Group (INRG) classification system: an INRG task force report. J Clin Oncol. 2009;27(2):289–97.

    Article  Google Scholar 

  12. Castel V, Garcia-Miguel P, Cañete A, Melero C, Navajas A, Ruíz-Jiménez J, et al. Prospective evaluation of the International NB Staging System (INSS) and the International NB Response Criteria (INRC) in a multicentre setting. Eur J Cancer. 1999;35:606–11.

    Article  CAS  Google Scholar 

  13. Monclair T, Brodeur GM, Ambros PF, Brisse HJ, Cecchetto G, Holmes K, et al. The International NB Risk Group (INRG) staging system: an INRG task force report. J Clin Oncol. 2008;27:298–303.

    Article  Google Scholar 

  14. Shimada H, Ambros IM, Dehner LP, Hata J, Joshi VV, Roald B, et al. The International NB Pathology Classification (the Shimada system). Cancer. 1999;86:364–72.

    Article  CAS  Google Scholar 

  15. Burgues O, Navarro S, Noguera R, Pellín A, Ruiz A, Castel V, et al. Prognostic value of the International NB Pathology Classification in NB (Schwannian stroma-poor) and comparison with other prognostic factors: a study of 182 cases from the Spanish NB Registry. Virchows Arch. 2006;449:410–20.

    Article  Google Scholar 

  16. Shimada H, Chatten J, Newton WA Jr, Sachs N, Hamoudi AB, Chiba T, et al. Histopathologic prognostic factors in neuroblastic tumors: definition of subtypes of ganglioNB and an age-linked classification of NBs. J Natl Cancer Inst. 1984;73:405–16.

    Article  CAS  Google Scholar 

  17. Villamón E, Piqueras M, Berbegall AP, Tadeo I, Castel V, Navarro S, et al. Comparative study of MLPA-FISH to determine DNA copy number alterations in neuroblastic tumors. Histol Histopathol. 2011;26(3):343–50.

    PubMed  Google Scholar 

  18. Yagyu S, Iehara T, Gotoh T, Miyachi M, Katsumi Y, Kikuchi K, et al. Preoperative analysis of 11q loss using circulating tumor-released DNA in serum: a novel diagnostic tool for therapy stratification of NB. Cancer Lett. 2011;309(2):185–9.

    Article  CAS  Google Scholar 

  19. Ambros Inge M, Brunner Clemens, Abbasi Reza, Frech Christian, Ambros Peter F, et al. Ultra-high density SNParray in NB molecular diagnostics. Front Oncol. 2014;4:202.

    Article  Google Scholar 

  20. High-risk Neuroblastoma Study 1.8 of SIOP-Europe (SIOPEN). ClinicalTrials.gov Identifier: NCT01704716.

  21. Ambros IM, Benard J, Boavida M, Bown N, Caron H, Combaret V, et al. Quality assessment of genetic markers used for therapy stratification. J Clin Oncol. 2003;21:2077–84.

    Article  CAS  Google Scholar 

  22. Noguera R, Cañete A, Pellin A, Ruiz A, Tasso M, Navarro S, et al. MYCN gain and MNA in a stage 4S neuroblastoma. Cancer Genet Cytogenet. 2003;140:157–61.

    Article  CAS  Google Scholar 

  23. Depuydt P, Boeva V, Hocking TD, Cannoodt R, Ambros IM, Ambros PF, et al. Genomic amplifications and distal 6q loss: novel markers for poor survival in high-risk neuroblastoma patients. JNCI J Natl Cancer Inst. 2018;110(10):1084–93.

  24. Lastowska M, Cotterill S, Pearson AD, Roberts P, McGuckin A, Lewis I, et al. Gain of chromosome arm 17q predicts unfavourable outcome in neuroblastoma patients. U.K. Children’s Cancer Study Group and the U.K. Cancer Cytogenetics Group. Eur J Cancer. 1997;33(10):1627–33.

    Article  CAS  Google Scholar 

  25. Bown N, Cotterill S, Lastowska M, O’Neill S, Pearson AD, Plantaz D, et al. Gain of chromosome arm 17q and adverse outcome in patients with neuroblastoma. N Engl J Med. 1999;340(25):1954–61.

    Article  CAS  Google Scholar 

  26. Spitz R, Hero B, Ernestus K, Berthold F. Gain of distal chromosome arm 17q is not associated with poor prognosis in neuroblastoma. Clin Cancer Res. 2003;9(13):4835–40.

    CAS  PubMed  Google Scholar 

  27. Theissen J, Oberthuer A, Hombach A, Volland R, Hertwig F, Fischer M, et al. Chromosome 17/17q gain and unaltered profiles in high resolution array-CGH are prognostically informative in neuroblastoma. Genes Chromosom Cancer. 2014;53(8):639–49.

    Article  CAS  Google Scholar 

  28. Carén H, Kryh H, Nethander M, Sjöberg R-M, Träger C, Nilsson S, et al. High-risk NB tumors with 11q-deletion display a poor prognostic, chromosome instability phenotype with later onset. Proc Natl Acad Sci USA. 2010;107(9):4323–8.

    Article  Google Scholar 

  29. Spitz R, Hero B, Simon T, Berthold F. Loss in chromosome 11q identifies tumors with increased risk for metastatic relapses in localized and 4S NB. Clin Cancer Res. 2006;12(11 Pt 1):3368–73.

    Article  CAS  Google Scholar 

  30. Juan Ribelles A, Barberá S, Yáñez Y, Gargallo P, Segura V, Juan B, et al. Clinical features of neuroblastoma with 11q deletion: an increase in relapse probabilities in localized and 4S stages. Sci Rep. 2019;9(1):1–9.

  31. Villamon E, Berbegall AP, Piqueras M, Tadeo I, Castel V, Djos A, et al. Genetic instability and intratumoral heterogeneity in neuroblastoma with MYCN amplification plus 11q deletion. PLoS One. 2013;8(1):e53740.

    Article  CAS  Google Scholar 

  32. Stallings RL, Carty P, McArdle L, Mullarkey M, McDermott M, O’Meara A, et al. Evolution of unbalanced gain of distal chromosome 2p in neuroblastoma. Cytogenet Genome Res. 2004;106(1):49–54.

    Article  CAS  Google Scholar 

  33. Corson TW, Huang A, Tsao MS, Gallie BL. KIF14 is a candidate oncogene in the 1q minimal region of genomic gain in multiple cancers. Oncogene. 2005;24(30):4741–53.

    Article  CAS  Google Scholar 

  34. Krona C, Caren H, Sjöberg RM, Sandstedt B, Laureys G, Kogner P, et al. Analysis of neuroblastoma tumour progression; loss of PHOX2B on 4p13 and 17q gain are early events in neuroblastoma tumourigenesis. Int J Oncol. 2008;32:575–83.

    CAS  PubMed  Google Scholar 

  35. Stallings RL, Howard J, Dunlop A, Mullarkey M, McDermott M, Breatnach F, et al. Are gains of chromosomal regions 7q and 11p important abnormalities in neuroblastoma? Cancer Genet Cytogenet. 2003;140(2):133–7.

    Article  CAS  Google Scholar 

  36. Parodi S, Pistorio A, Erminio G, Ognibene M, Morini M, Garaventa A. Loss of whole chromosome X predicts prognosis of neuroblastoma patients with numerical genomic profile. Pediatr Blood Cancer. 2019;66(5):e27635.

  37. Grimwood J, Gordon L, Olsen Terry A, Schmutz J, Lamerdin J, et al. The DNA sequence and biology of human chromosome 19. Nature. 2004;428:529–35.

    Article  CAS  Google Scholar 

  38. Nakamura M, Yang F, Fujisawa H, Yonekawa Y, Kleihues P, Ohgaki H. Loss of heterozygosity on chromosome 19 in secondary glioblastomas. J Neuropathol Exp Neurol. 2000;59(6):539–43.

    Article  CAS  Google Scholar 

  39. Alvarez S, MacGrogan D, Calasanz MJ, Nimer SD, Jhanwar SC. Frequent gain of chromosome 19 in megakaryoblastic leukemias detected by comparative genomic hybridization. Genes Chromosom Cancer. 2001;32(3):285–93.

    Article  CAS  Google Scholar 

  40. Mora J, Cheung N-KV, Chen L, Qin J, Gerald W. Loss of heterozygosity at 19q13.3 is associated with locally aggressive neuroblastoma. Clin Cancer Res. 2001;7:1358–61.

    CAS  PubMed  Google Scholar 

  41. Cañete A, Gerrard M, Rubie H, Castel V, Di Cataldo A, Munzer C, et al. Poor survival for infants with MYCN-amplified metastatic neuroblastoma despite intensified treatment: the International Society of Paediatric Oncology European Neuroblastoma Experience. J Clin Oncol. 2009;27(7):1014–9.

Download references

Acknowledgements

We thank Desiree Ramal and Mireia Modesto for the data management in the study and all the Spanish hospitals that contributed with the cases reviewed. Hospital U i P La Fe is a full member of the “European Reference Network for paediatric Oncology (ERN-PAEDCAN)”.

Funding

No sources of study funding have been used.

Author information

Authors and Affiliations

Authors

Contributions

All the following authors: AJR, PG, CF, VS, YY, BJ, AJC, JFdeM, AC and VC have contributed to the work sufficiently. Main author: AJR. Contribution and correction of the manuscript: PG, VS, YY, AC, VC. Data collection and English translation: CF, BJ. Molecular karyotyping: AJC. Biostatistical analysis: JFdeM.

Corresponding author

Correspondence to A. Juan Ribelles.

Ethics declarations

Conflict of interest

The authors declare no competing financial interests and no other non-financial competing interests.

Ethical approval (Research involving human participants and/or animals)

The study was approved by the Ethics and Investigation Committee Hospital U i P La Fe (CEIm). The study was performed according to the Declaration of Helsinki.

Informed consent

All study actions were performed under the appropriate ethics code, and consent was obtained from all patients within the clinical trial recruited for treatment.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Juan Ribelles, A., Gargallo, P., Ferriol, C. et al. Distribution of segmental chromosomal alterations in neuroblastoma. Clin Transl Oncol 23, 1096–1104 (2021). https://doi.org/10.1007/s12094-020-02497-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12094-020-02497-2

Keywords

Navigation