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Genotype-Controlled Vertical Transmission Exerts Selective Pressure on Community Assembly of Salvia miltiorrhiza

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Abstract

The plant’s endophytic fungi play an important role in promoting host development and metabolism. Studies have shown that the factors affecting the assembly of the endophyte community mainly include host genotype, vertical transmission, and soil origin. However, we do not know the role of vertically transmitted endohytic fungi influences on the host-plant’s endophytic community assembly. Salvia miltiorrhiza from three production areas were used as research objects; we constructed three production area genotypes of S. miltiorrhiza regenerated seedlings simultaneously. Based on high-throughput sequencing, we analyzed the effects of genotype, soil origin, and vertical transmission on endophytic fungal communities. The results show that the community of soil origins significantly affected the endophytic fungal community in the regenerated seedlings of S. miltiorrhiza. The influence of genotype on community composition occurs through a specific mechanism. Genotype may selectively screen certain communities into the seed, thereby exerting selection pressure on the community composition process of offspring. As the number of offspring increases gradually, the microbiota, controlled by genotype and transmitted vertically, stabilizes, ultimately resulting in a significant effect of genotype on community composition.

Furthermore, we observed that the taxa influencing the active ingredients are also selected as the vertically transmitted community. Moreover, the absence of an initial vertically transmitted community in S. miltiorrhiza makes it more vulnerable to infection by pathogenic fungi. Therefore, it is crucial to investigate and comprehend the selection model of the vertically transmitted community under varying genotypes and soil conditions. This research holds significant implications for enhancing the quality and yield of medicinal plants and economic crops.

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Data availability

The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: NCBI (accession: PRJNA756137 & PRJNA761573).

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Funding

This study was supported by grants from the National Natural Science Foundation of China(81173493).

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Authors and Affiliations

  1. State Key Laboratory of Characteristic Chinese Medicine Resources in Southwest China, Chengdu, China

    Hongyang Lv, Xiaoyu Li, Dongmei He, Xin Chen, Min Liu, Yin Lan, Hai Wang & Zhuyun Yan

  2. Chengdu University of Traditional Chinese Medicine, Chengdu, China

    Hongyang Lv, Xiaoyu Li, Dongmei He, Xin Chen, Min Liu, Yin Lan, Hai Wang & Zhuyun Yan

  3. State Key Laboratory of Quality Research in Chinese Medicine, Chengdu, China

    Jin Zhao

  4. Institute of Chinese Medical Sciences, University of Macau, Taipa, China

    Jin Zhao

Authors
  1. Hongyang Lv
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  2. Xiaoyu Li
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  3. Dongmei He
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  4. Xin Chen
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  5. Min Liu
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  6. Yin Lan
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  7. Jin Zhao
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  8. Hai Wang
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  9. Zhuyun Yan
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Contributions

Hongyang Lv and Zhuyun Yan contributed to the study conception and design. Material preparation, data collection and analysis were performed by Jin Zhao, Hai Wang, Dongmei He, Xin Chen, Yin Lan and Min Liu. The first draft of the manuscript was written by Hongyang Lv and Xiaoyu Li, and all authors commented on previous versions of the manuscript. All authors read and approved the final manuscript.

Corresponding authors

Correspondence to Jin Zhao, Hai Wang or Zhuyun Yan.

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Lv, H., Li, X., He, D. et al. Genotype-Controlled Vertical Transmission Exerts Selective Pressure on Community Assembly of Salvia miltiorrhiza. Microb Ecol 86, 2934–2948 (2023). https://doi.org/10.1007/s00248-023-02295-7

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  • DOI: https://doi.org/10.1007/s00248-023-02295-7

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