Abstract
Recently, computer intelligent analysis as a significant technical means to discuss the differential mutant genes expression with the PPI network is current hot issues. In this paper, we mainly focus on discussing the relationship between endometrial cancer (EC) and ovarian cancer (OC) based on the gene expression, which could be classified into typical 13 categories after clustering processing over PPI network. Especially for the further analysis of homologous and heterogeneous genes’ comparison based on the similar protein function expression, we present a categorical scale to calculate the probability of endometrial cancer metastasizes to ovarian cancer by statistical method.
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References
Sevimoglu, T., Arga, K.Y.: The role of protein interaction networks in systems biomedicine. Comput. Struct. Biotechnol. J. 11(18), 22–27 (2014)
van Niekerk, C.C., Bulten, J., Vooijs, G.P., Verbeek, A.L.: The Association between Primary Endometrioid Carcinoma of the Ovary and Synchronous Malignancy of the Endometrium. Obstet Gynecol Int (2010)
Ricci, R., Komminoth, P., Bannwart, F., Torhorst, J., Wight, E., et al.: PTEN as a molecular marker to distinguish metastatic from primary synchronous endometrioid carcinomas of the ovary and uterus. Diagn. Mol. Pathol. 12(2), 71–78 (2003)
Cancer Genome Atlas Research, N.: Integrated genomic analyses of ovarian carcinoma. Nature 10(11), 609–615 (2011)
Cancer Genome Atlas Research, N, et al.: Integrated genomic characterization of end endometrial carcinoma. Nature 5(1), 67–73 (2013)
McConechy, M.K., et al.: Ovarian and endometrial endometrioid carcinomas have distinct CTNNB1 and PTEN mutation profiles. ModPathol 27(1), 128–134 (2014)
Kurman, R.J., Shih, IeM.: Molecular pathogenesis and extra ovarian origin of epithelial ovarian cancer—shifting the paradigm. Hum. Pathol. 42(7), 918–931 (2011)
McConechy, M.K., Anglesio, M.S., Kalloger, S.E., et al.: Subtype-specific mutation of PP2R1A in endometrial and ovarian carcinomas. J. Pathol. 223(5), 567–573 (2011)
Menyhárt, O., Fekete, J.T., Győrffy, B.: Gene expression indicates altered immune modulation and signaling pathway activation in ovarian cancer patients resistant to Topotecan. Int. J. Mol. Sci. 20(11) (2019)
Reid, B.M., Permuth, J.B., Chen, Y.A., et al.: Genome-wide Analysis of Common Copy Number Variation and Epithelial Ovarian Cancer Risk 28(7), 1117–1126 (2019)
Xiong, Y., Guo, M., Ruan, L., et al.: Heterogeneous network embedding enabling accurate disease association predictions. BMC Med. Genomics 186(12) (2019)
Haque, M.M., Nilsson, E.E., Holder, L.B., et al.: Genomic clustering of differential DNA methylated regions associated with the epigenetic transgenerational inheritance of disease and phenotypic variation. BMC Genomics 418(17) (2016)
cBioportal For Cancer Homepage. https://www.cbioportal.org/. last accessed 2020/4/16
COSMIC Homepage. https://cancer.Sanger.ac.uk. last accessed 2020/4/22
PubMed Homepage. https://www.ncbi.nlm.nih.gov/pubmed. last accessed 2020/4/22
String Homepage. https://string-db.org/. last accessed 2020/4/21
Cytoscape Homepage. https://cytoscape.org/. last accessed 2020/4/18
Acknowledgements
This work was supported by the National Natural Science Foundation of China (No. 61701104), and by the Science and Technology Development Plan of Jilin Province, China (No.20190201194JC).
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Zhou, T.H., Pu, W.J., Xie, H., Zhang, L.Y., Wang, L. (2021). Gene Expression PPI Network Clustering Analysis Between Endometrial Cancer and Ovarian Cancer. In: Pan, JS., Li, J., Namsrai, OE., Meng, Z., Savić, M. (eds) Advances in Intelligent Information Hiding and Multimedia Signal Processing. Smart Innovation, Systems and Technologies, vol 211. Springer, Singapore. https://doi.org/10.1007/978-981-33-6420-2_24
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DOI: https://doi.org/10.1007/978-981-33-6420-2_24
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