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Hybrid Pre-training Based on Masked Autoencoders for Medical Image Segmentation

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Theoretical Computer Science (NCTCS 2022)

Part of the book series: Communications in Computer and Information Science ((CCIS,volume 1693))

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Abstract

The application of deep learning in the field of medical images has been gaining attention in recent years. However, due to the small number of medical images, the inability to generate them manually, and the high cost of annotation, it is difficult to train them. Masked Autoencoders (MAE), a recent hot new approach in the field of self-supervision, is based on Vision Transformer (ViT) architecture coding to improve the learning difficulty by adding masking to the cut non-overlapping image patches to obtain deeper image representations. In this paper, we employ three different small-scale pre-training datasets using MAE’s pre-training method to pre-train and select the medical segmentation task as its performance test task. We experimentally find that the new hybrid dataset pre-trained with the training set of the hybrid downstream task and other datasets has good performance, and the results are improved compared to those without pre-training, and better than those obtained with a single dataset, showing the potential of the self-supervised method hybrid pre-training for medical segmentation tasks.

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Correspondence to Kuan Li .

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Han, Y., Chen, H., Xu, P., Li, Y., Li, K., Yin, J. (2022). Hybrid Pre-training Based on Masked Autoencoders for Medical Image Segmentation. In: Cai, Z., Chen, Y., Zhang, J. (eds) Theoretical Computer Science. NCTCS 2022. Communications in Computer and Information Science, vol 1693. Springer, Singapore. https://doi.org/10.1007/978-981-19-8152-4_12

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  • DOI: https://doi.org/10.1007/978-981-19-8152-4_12

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  • Publisher Name: Springer, Singapore

  • Print ISBN: 978-981-19-8151-7

  • Online ISBN: 978-981-19-8152-4

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