Abstract
The generation of recombinant antibodies by phage display in high-throughput demands fast downstream technologies and streamlined processes for the identification and initial characterisation of individual binders. Next to standard immunological methods such as enzyme-linked immunosorbent assays (ELISA) and Western-blot, protein microarrays offer a wide range of possibilities in the evaluation process of monoclonal binders. Here, we describe the application of a special protein microarray method – the multiple spotting technique (MIST) – for the simultaneous evaluation of hundreds of phage display derived soluble monoclonal antibody fragments on protein microarrays. The standard operating procedures provided include the expression of soluble antibody fragments in microtitre plates, the spotting protocols and data evaluation schemes. Additionally, we show the comparability of this protein microarray application to conventional ELISA on a recent target antigen in our semi-automated selection pipeline. Applying MIST allows to reduce time, material and waste, and extends automation beyond the selection process applying conventional microarray machinery.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Angenendt P, Glökler J, Konthur Z, Lehrach H, Cahill D (2003) 3D protein microarrays: performing multiplex immunoassays on a single chip. Anal Chem 75:4368–4372
Angenendt P, Wilde J, Kijanka G, Baars S, Cahill DJ, Kreutzberger J, Lehrach H, Konthur Z, Glökler J (2004) Seeing better through a MIST: evaluation of monoclonal recombinant antibody fragments on microarrays. Anal Chem 76:2916–2921
Ayriss J, Woods T, Bradbury A, Pavlik P (2007) High-throughput screening of single-chain antibodies using multiplexed flow cytometry. J Proteome Res 6:1072–1082
Buckler DR, Park A, Viswanathan M, Hoet RM, Ladner RC (2008) Screening isolates from antibody phage display libraries. Drug Discov Today 13:318–324
De Masi F, Chiarella P, Wilhelm H, Massimi M, Bullard B, Ansorge W, Sawyer A (2005) High throughput production of mouse monoclonal antibodies using antigen microarrays. Proteomics 5:4070–4081
de Wildt RM, Mundy CR, Gorick BD, Tomlinson IM (2000) Antibody arrays for high-throughput screening of antibody-antigen interactions. Nat Biotechnol 18:989–994
Hallborn J, Carlsson R (2002) Automated screening procedure for high-throughput generation of antibody fragments. Biotechniques Suppl, 30–37
Hultschig C, Kreutzberger J, Seitz H, Konthur Z, Büssow K, Lehrach H (2006) Recent advances in protein microarrays. Curr Opin Chem Biol 10:4–10
Hust M, Steinwand M, Al-Halabi L, Helmsing S, Schirrmann T, Dübel S (2009) Improved microtiter plate production of single chain Fv fragments in Escherichia coli. N Biotechnol. 25:424–428
Joos T, Bachmann J (2009) Protein microarrays: potentials and limitations. Front Biosci 14:4376–4385
Konthur Z (2007) Automation of selection and engineering. In: Dübel S (ed) Handbook of therapeutic antibodies. Wiley-VCH, Weinheim, pp 413–431
Konthur Z, Walter G (2002) Automation of phage display for high-throughput antibody development. Targets 1:30–36
Konthur Z, Hust M, Dübel S (2005) Perspectives for systematic in vitro antibody generation. Gene 364:19–29
Krebs B, Rauchenberger R, Reiffert S, Rothe C, Tesar M, Thomassen E, Cao M, Dreier T, Fischer D, Höss A, Inge L, Knappik A, Marget M, Pack P, Meng XQ, Schier R, Söhlemann P, Winter J, Wölle J, Kretzschmar T (2001) High-throughput generation and engineering of recombinant human antibodies. J Immunol Methods 254:67–84
Schwenk JM, Lindberg J, Sundberg M, Uhlén M, Nilsson P (2007) Determination of binding specificities in highly multiplexed bead-based assays for antibody proteomics. Mol Cell Proteomics 6:125–132
Taussig MJ, Stoevesandt O, Borrebaeck CA, Bradbury AR, Cahill D, Cambillau C, de Daruvar A, Dübel S, Eichler J, Frank R, Gibson TJ, Gloriam D, Gold L, Herberg FW, Hermjakob H, Hoheisel JD, Joos TO, Kallioniemi O, Koegl M, Konthur Z, Korn B, Kremmer E, Krobitsch S, Landegren U, van der Maarel S, McCafferty J, Muyldermans S, Nygren PA, Palcy S, Plückthun A, Polic B, Przybylski M, Saviranta P, Sawyer A, Sherman DJ, Skerra A, Templin M, Ueffing M, Uhlen M (2007) ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome. Nat Methods 4:13–7
Turunen L, Takkinen K, Söderlund H, Pulli T (2009) Automated panning and screening procedure on micorplates for antibody generation from phage display libraries. J Biomol Screen 14:282–293
Walter G, Konthur Z, Lehrach H (2001) High-throughput screening of surface displayed gene products. Comb Chem High Throughput Screen 4:193–205
Acknowledgements
This work was supported by the German Federal Ministry for Education and Research (BMBF) through the National Genome Research Network (NGFN-II) project “Antibody Factory” (Grant No. 01GR0427) and the Max Planck Society. ZK acknowledges additional support from EU-FP6 CA “Proteome Binders” (RICA 026008).
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2010 Springer-Verlag Berlin Heidelberg
About this protocol
Cite this protocol
Konthur, Z., Wilde, J. (2010). Evaluation of Recombinant Antibodies on Protein Microarrays Applying the Multiple Spotting Technique. In: Kontermann, R., Dübel, S. (eds) Antibody Engineering. Springer Protocols Handbooks. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-01147-4_34
Download citation
DOI: https://doi.org/10.1007/978-3-642-01147-4_34
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-01146-7
Online ISBN: 978-3-642-01147-4
eBook Packages: Springer Protocols