Abstract
The development of lab-on-a-chip technology is regarded as one of the most potent and reliable technologies for rapid and early detection of the pathogen with portable and on-site detection devices, the so-called point-of-care (PoC) detection systems. These are essentially easy to handle and cheap and offer rapid sample-to-answer results to nontechnical operators in a fast and accurate manner. A summary to provide an explanation about why lab-on-a-chip technology is one of the strategies for early detection of pathogens for medical diagnosis has been presented. The fabrication of the devices includes the three most important factors that are described. The devices are also implemented for the detection of various pathogens such as bacteria, protozoa, and virus, and also how each of the systems has specific ways to get the results. Furthermore, newly established detection sensing principles and application of the lab-on-a-chip and microfluidic devices are presented, and the remaining technical challenges and limitations are considered.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Afshari A, Schrenzel J, Ieven M, Harbarth S. Bench-to-bedside review: rapid molecular diagnostics for bloodstream infection – a new frontier? Crit Care. 2012;16:222.
Ahn CH, Choi J-W, Beaucage G, Nevin J, Lee J-B, Puntambekar A, Lee RJY. Disposable smart lab on a chip for point-of-care clinical diagnostics. Proc IEEE. 2004;92:154–73.
Amexo M, Tolhurst R, Barnish G, Bates I. Malaria misdiagnosis: effects on the poor and vulnerable. Lancet. 2004;364:1896–8.
Bakajin O, Fountain E, Morton K, Chou SY, Sturm JC, Austin RH. Materials aspects in micro- and nanofluidic systems applied to biology. MRS Bull. 2006;31:108–13.
Breman JG, Alilio MS, Mills A. Conquering the intolerable burden of malaria: what’s new, what’s needed: a summary. Am J Trop Med Hyg. 2004;71:1–15.
Burke MW. Image acquisition. 1996. https://doi.org/10.1007/978-94-009-0069-1
Castillo-León J. Microfluidics and lab-on-a-chip devices: history and challenges. In: Castillo-León J, Svendsen WE, editors. Lab-on-a-chip devices and micro-total analysis systems. Cham: Springer; 2015. p. 1–15.
Craw P, Balachandran W. Isothermal nucleic acid amplification technologies for point-of-care diagnostics: a critical review. Lab Chip. 2012;12:2469.
Duffy DC, McDonald JC, Schueller OJA, Whitesides GM. Rapid prototyping of microfluidic systems in poly(dimethylsiloxane). Anal Chem. 1998;70:4974–84.
Foudeh AM, Fatanat Didar T, Veres T, Tabrizian M. Microfluidic designs and techniques using lab-on-a-chip devices for pathogen detection for point-of-care diagnostics. Lab Chip. 2012;12:3249.
Giannitsis AT, Min M. Usage of microfluidic lab-on-chips in biomedicine. In: 2010 12th biennial baltic electronics conference. Tallinn: IEEE; 2010. p. 249–52.
Gupta S, Ramesh K, Ahmed S, Kakkar V. Lab-on-chip technology: a review on design trends and future scope in biomedical applications. IJBSBT. 2016;8:311–22.
Hopkins H, González IJ, Polley SD, et al. Highly sensitive detection of malaria parasitemia in a malaria-endemic setting: performance of a new loop-mediated isothermal amplification kit in a remote clinic in Uganda. J Infect Dis. 2013;208:645–52.
Izadi D, Nguyen T, Lapidus L. Complete procedure for fabrication of a fused silica ultrarapid microfluidic mixer used in biophysical measurements. Micromachines. 2017;8:16.
Kant K, Shahbazi M-A, Dave VP, Ngo TA, Chidambara VA, Than LQ, Bang DD, Wolff A. Microfluidic devices for sample preparation and rapid detection of foodborne pathogens. Biotechnol Adv. 2018;36:1003–24.
Khanarian G. Optical properties of cyclic olefin copolymers. Opt Eng. 2001;40:1024.
Kovarik ML, Ornoff DM, Melvin AT, Dobes NC, Wang Y, Dickinson AJ, Gach PC, Shah PK, Allbritton NL. Micro total analysis systems: fundamental advances and applications in the laboratory, clinic, and field. Anal Chem. 2013;85:451–72.
Lafleur JP, Jönsson A, Senkbeil S, Kutter JP. Recent advances in lab-on-a-chip for biosensing applications. Biosens Bioelectron. 2016;76:213–33.
Liang C, Chu Y, Cheng S, Wu H, Kajiyama T, Kambara H, Zhou G (2012) Multiplex Loop-Mediated Isothermal Amplification Detection by Sequence-Based Barcodes Coupled with Nicking Endonuclease-Mediated Pyrosequencing. Anal Chem 84:3758–3763.
Ma L, Petersen M, Lu X. Identification and antimicrobial susceptibility testing of Campylobacter using a microfluidic lab-on-a-chip device. Appl Environ Microbiol. 2020;86:e00096–20.
Maia Chagas A, Prieto-Godino LL, Arrenberg AB, Baden T. The €100 lab: a 3D-printable open-source platform for fluorescence microscopy, optogenetics, and accurate temperature control during behaviour of zebrafish, Drosophila, and Caenorhabditis elegans. PLoS Biol. 2017;15:e2002702.
Mandal PK, Biswas AK, Choi K, Pal UK. Methods for rapid detection of foodborne pathogens: an overview. Am J Food Technol. 2011;6:87–102.
Murray CK, Gasser RA, Magill AJ, Miller RS. Update on rapid diagnostic testing for malaria. Clin Microbiol Rev. 2008;21:97–110.
Nasseri B, Soleimani N, Rabiee N, Kalbasi A, Karimi M, Hamblin MR. Point-of-care microfluidic devices for pathogen detection. Biosens Bioelectron. 2018;117:112–28.
Nguyen T, Zoëga Andreasen S, Wolff A, Duong Bang D. From lab on a chip to point of care devices: the role of open source microcontrollers. Micromachines. 2018;9:403.
Nguyen T, Anh Ngo T, Duong Bang D, Wolff A. Optimising the supercritical angle fluorescence structures in polymer microfluidic biochips for highly sensitive pathogen detection: a case study on Escherichia coli. Lab Chip. 2019;19:3825–33.
Nguyen T, Chidambara VA, Andreasen SZ, Golabi M, Huynh VN, Linh QT, Bang DD, Wolff A. Point-of-care devices for pathogen detections: the three most important factors to realise towards commercialization. TrAC Trends Anal Chem. 2020;131:116004.
Nikkhoo N, Cumby N, Gulak PG, Maxwell KL. Rapid bacterial detection via an all-electronic CMOS biosensor. PLoS ONE. 2016;11:e0162438.
O’Dempsey TJD, McArdla TF, Laurence BE, Lamont AC, Todd JE, Greenwood BM. Overlap in the clinical features of pneumonia and malaria in African children. Trans R Soc Trop Med Hyg. 1993;87:662–5.
Obahiagbon U, Smith JT, Zhu M, Katchman BA, Arafa H, Anderson KS, Blain Christen JM. A compact, low-cost, quantitative and multiplexed fluorescence detection platform for point-of-care applications. Biosens Bioelectron. 2018;117:153–60.
Oh SJ, Park BH, Jung JH, Choi G, Lee DC, Kim DH, Seo TS. Centrifugal loop-mediated isothermal amplification microdevice for rapid, multiplex and colorimetric foodborne pathogen detection. Biosens Bioelectron. 2016;75:293–300.
Petralia S, Conoci S. PCR technologies for point of care testing: progress and perspectives. ACS Sens. 2017;2:876–91.
Petralia S, Verardo R, Klaric E, Cavallaro S, Alessi E, Schneider C. In-check system: a highly integrated silicon lab-on-chip for sample preparation, PCR amplification and microarray detection of nucleic acids directly from biological samples. Sensors Actuators B Chem. 2013;187:99–105.
Phillips EA, Moehling TJ, Ejendal KFK, et al (2019) Microfluidic rapid and autonomous analytical device (microRAAD) to detect HIV from whole blood samples. Lab Chip 19:3375–3386.
Polley SD, Gonzalez IJ, Mohamed D, et al. Clinical evaluation of a loop-mediated amplification kit for diagnosis of imported malaria. J Infect Dis. 2013;208:637–44.
Reisner W, Larsen NB, Flyvbjerg H, Tegenfeldt JO, Kristensen A. Directed self-organization of single DNA molecules in a nanoslit via embedded nanopit arrays. Proc Natl Acad Sci U S A. 2009;106:79–84.
Sin ML, Gao J, Liao JC, Wong PK. System integration – a major step toward lab on a chip. J Biol Eng. 2011;5:6.
Sun Y, Quyen TL, Hung TQ, Chin WH, Wolff A, Bang DD. A lab-on-a-chip system with integrated sample preparation and loop-mediated isothermal amplification for rapid and quantitative detection of Salmonella spp. in food samples. Lab Chip. 2015;15:1898–904.
Tan JJL, Capozzoli M, Sato M, et al. An integrated lab-on-chip for rapid identification and simultaneous differentiation of tropical pathogens. PLoS Negl Trop Dis. 2014;8:e3043.
Taylor BJ, Howell A, Martin KA, et al. A lab-on-chip for malaria diagnosis and surveillance. Malar J. 2014;13:179.
Teo J, Pietro PD, Biagio FS, et al. VereFluTM: an integrated multiplex RT-PCR and microarray assay for rapid detection and identification of human influenza A and B viruses using lab-on-chip technology. Arch Virol. 2011;156:1371.
The malERA Consultative Group on Diagnoses and Diagnostics. A research agenda for malaria eradication: diagnoses and diagnostics. PLoS Med. 2011;8:e1000396.
Thiha A, Ibrahim F, Muniandy S, Dinshaw IJ, Teh SJ, Thong KL, Leo BF, Madou M. All-carbon suspended nanowire sensors as a rapid highly-sensitive label-free chemiresistive biosensing platform. Biosens Bioelectron. 2018;107:145–52.
Tsougeni K, Kastania AS, Kaprou GD, Eck M, Jobst G, Petrou PS, Kakabakos SE, Mastellos D, Gogolides E, Tserepi A. A modular integrated lab-on-a-chip platform for fast and highly efficient sample preparation for foodborne pathogen screening. Sensors Actuators B Chem. 2019;288:171–9.
van den Berg A. Labs on chips for biomedical applications. In: 2013 IEEE 26th international conference on micro electro mechanical systems (MEMS). Taipei: IEEE; 2013, p. 149–152.
Volpatti LR, Yetisen AK. Commercialization of microfluidic devices. Trends Biotechnol. 2014;32:347–50.
Waldauer SA, Wu L, Yao S, Bakajin O, Lapidus LJ. Microfluidic mixers for studying protein folding. JoVE. 2012;3976
Wang L-J, Sun R, Chang Y-C, Li L. Ultra low-cost, portable smartphone optosensors for mobile point-of-care diagnostics. In: Raghavachari R, Liang R, Pfefer TJ, editors. Design and quality for biomedical technologies XI. San Francisco: SPIE; 2018. p. 32.
Watanabe R, Buates S, Tsuboi T, Takeo S, Krasaesub S, Suktawonjaroenpon W, Sattabongkot J, Sirichaisinthop J, Han E-T. Evaluation of loop-mediated isothermal amplification (LAMP) for malaria diagnosis in a field setting. Am J Trop Med Hygiene. 2011;85:594–6.
Wittbrodt BT, Glover AG, Laureto J, Anzalone GC, Oppliger D, Irwin JL, Pearce JM. Life-cycle economic analysis of distributed manufacturing with open-source 3-D printers. Mechatronics. 2013;23:713–26.
Yager P, Domingo GJ, Gerdes J. Point-of-care diagnostics for global health. Annu Rev Biomed Eng. 2008;10:107–44.
Zhang X, Lowe SB, Gooding JJ. Brief review of monitoring methods for loop-mediated isothermal amplification (LAMP). Biosens Bioelectron. 2014;61:491–9.
Zhi X, Deng M, Yang H, Gao G, Wang K, Fu H, Zhang Y, Chen D, Cui D. A novel HBV genotypes detecting system combined with microfluidic chip, loop-mediated isothermal amplification and GMR sensors. Biosens Bioelectron. 2014;54:372–7.
Zhu H, Fohlerová Z, Pekárek J, Basova E, Neužil P. Recent advances in lab-on-a-chip technologies for viral diagnosis. Biosens Bioelectron. 2020;153:112041.
Acknowledgments
The Basic Science Research Program supported this work through the National Research Foundation of Korea (NRF) funded by the Ministry of Education (No. 2018R1A6A1A03025582, 2019R1D1A3A03103828, and 2022R1I1A3063302), Republic of Korea.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2023 The Author(s), under exclusive license to Springer Nature Switzerland AG
About this chapter
Cite this chapter
Luthfikasari, R., Patil, T.V., Patel, D.K., Ganguly, K., Dutta, S.D., Lim, KT. (2023). Lab-on-a-Chip Devices for Medical Diagnosis II: Strategies for Pathogen Detection. In: Lim, KT., Abd-Elsalam, K.A. (eds) Nanorobotics and Nanodiagnostics in Integrative Biology and Biomedicine. Springer, Cham. https://doi.org/10.1007/978-3-031-16084-4_12
Download citation
DOI: https://doi.org/10.1007/978-3-031-16084-4_12
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-031-16083-7
Online ISBN: 978-3-031-16084-4
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)