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Measuring NLR Oligomerization IV: Using Förster Resonance Energy Transfer (FRET)-Fluorescence Lifetime Imaging Microscopy (FLIM) to Determine the Close Proximity of Inflammasome Components

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NLR Proteins

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1417))

Abstract

Intracellular signaling and cellular activation have been demonstrated to reside on multi-protein complexes rather than in isolated proteins. Consequently, techniques to resolve these complexes have gained much attention over the last few years. Förster Resonance Energy Transfer (FRET) coupled with Fluorescence Lifetime Imaging Microscopy (FLIM) is a powerful tool to discriminate direct interactions between two proteins within a multi-protein complex. Here, we present the use of FRET-FLIM as an experimental tool for the interpretation of the inflammasome composition. We also introduce some considerations required for the correct use of this technique and the control experiments that should be implemented.

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References

  1. Strowig T, Henao-Mejia J, Elinav E et al (2012) Inflammasomes in health and disease. Nature 481:278–286

    Article  CAS  PubMed  Google Scholar 

  2. Lamkanfi M, Dixit VM (2012) Inflammasomes and their roles in health and disease. Annu Rev Cell Dev Biol 28:137–161

    Article  CAS  PubMed  Google Scholar 

  3. Broz P, Monack DM (2011) Molecular mechanisms of inflammasome activation during microbial infections. Immunol Rev 243:174–190

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Latz E, Xiao TS, Stutz A (2013) Activation and regulation of the inflammasomes. Nat Rev Immunol 13:397–411

    Article  CAS  PubMed  Google Scholar 

  5. Backsai BJ, Skoch J, Hickey GA et al (2003) FRET determinations using multiphoton fluorescence lifetime imaging microscopy (FLIM) to characterize amyloid-beta plaques. J Biomed Opt 8:368–375

    Article  Google Scholar 

  6. Elangovan M, Day RN, Periasamy A (2002) Nanosecond fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy to localize the protein interactions in a single living cell. J Microsc 205:3–14

    Article  CAS  PubMed  Google Scholar 

  7. Förster T. Intermolecular energy migration and fluorescence. Ann. Phys. 1948;2:55–75. doi:10.1002/andp.19484370105

    Google Scholar 

  8. Gadella BM, Colenbrander B, Van Golde LM et al (1993) Boar seminal vesicles secrete arylsulfatases into seminal plasma: evidence that desulfation of seminolipid occurs only after ejaculation. Biol Reprod 48:483–489

    Article  CAS  PubMed  Google Scholar 

  9. Straub M, Lodemann P, Holroyd P et al (2000) Live cell imaging by multifocal multiphoton microscopy. Eur J Cell Biol 79:726–734

    Article  CAS  PubMed  Google Scholar 

  10. Wallrabe H, Periasamy A (2005) Imaging protein molecules using FRET and FLIM microscopy. Curr Opin Biotechnol 16:19–27

    Article  CAS  PubMed  Google Scholar 

  11. Becker W (2008) Fluorescence lifetime imaging—techniques and applications. J Microsc 247:119–136

    Article  Google Scholar 

  12. Thomas AV, Berezovska O, Hyman BT et al (2008) Visualizing interaction of proteins relevant to Alzheimer’s disease in intact cells. Methods 44:299–303

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Badiola N, de Oliveira RM, Herrera F et al (2011) Tau enhances alpha-synuclein aggregation and toxicity in cellular models of synucleinopathy. PLoS One 6, e26609

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Flix B, de la Torre C, Castillo J et al (2013) Dysferlin interacts with calsequestrin-1, myomesin-2 and dynein in human skeletal muscle. Int J Biochem Cell Biol 45:1927–1938

    Article  CAS  PubMed  Google Scholar 

  15. Comalada M, Ballester I, Bailón E et al (2006) Inhibition of pro-inflammatory markers in primary bone marrow-derived mouse macrophages by naturally occurring flavonoids: analysis of the structure-activity relationship. Biochem Pharmacol 72:1010–1021

    Article  CAS  PubMed  Google Scholar 

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Acknowledgement

M.C. and O.B. contributed equally to this work. The authors thank Carmen Casal and Eva Companys for their help in developing the FRET-FLIM technique presented here. O.B is a recipient of the “Miguel Servet” Grant provided by the FEDER (European Funds for Regional Development) and the Carlos III Institute of Health (Ministry for Economy and Competitivity, Spain). C.Y. is recipient of “La Caixa” fellowship.

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Correspondence to Mònica Comalada .

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Youssif, C., Flix, B., Belbin, O., Comalada, M. (2016). Measuring NLR Oligomerization IV: Using Förster Resonance Energy Transfer (FRET)-Fluorescence Lifetime Imaging Microscopy (FLIM) to Determine the Close Proximity of Inflammasome Components. In: Di Virgilio, F., Pelegrín, P. (eds) NLR Proteins. Methods in Molecular Biology, vol 1417. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-3566-6_11

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  • DOI: https://doi.org/10.1007/978-1-4939-3566-6_11

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-3564-2

  • Online ISBN: 978-1-4939-3566-6

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