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From Sequences to Enzymes: Heterologous Expression of Genes from Marine Microbes

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Marine Genomics

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2498))

Abstract

Heterologous expression is an easy and broadly applicable experimental approach widely used to investigate protein functions without the need to genetically manipulate the original host. The approach is used to obtain large quantities of the desired protein, which can be further analyzed from a biochemical, structural, and functional perspective. The expression system consists of three main components: (1) a foreign DNA sequence coding for the protein of interest; (2) a suitable expression vector; (3) a suitable host (bacterial, yeast, or mammalian cells) which does not encode or express the protein of interest. Here, we show how to apply an Escherichia coli-based expression system to overexpress protein encoding genes from marine microbes.

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References

  1. Binder MD, Hirokawa N, Windhorst U (2009) Heterologous expression. In: Binder MD, Hirokawa N, Windhorst U (eds) Encyclopedia of neuroscience. Springer, Heidelberg, pp 1830–1830

    Chapter  Google Scholar 

  2. Frommer WB, Ninnemann O (1995) Heterologous expression of genes in bacterial, fungal, animal, and plant cells. Annu Rev Plant Physiol Plant Mol Biol 46:419–444

    Article  CAS  Google Scholar 

  3. Rosano GL, Ceccarelli EA (2014) Recombinant protein expression in Escherichia coli: advances and challenges. Front Microbiol 5:172

    PubMed  PubMed Central  Google Scholar 

  4. Chien A, Edgar DB, Trela JM (1976) Deoxyribonucleic acid polymerase from the extreme thermophile Thermus aquaticus. J Bacteriol 127:1550–1557

    Article  CAS  Google Scholar 

  5. Lawyer FC, Stoffel S, Saiki RK et al (1989) Isolation, characterization, and expression in Escherichia coli of the DNA polymerase gene from Thermus aquaticus. J Biol Chem 264:6427–6437

    Article  CAS  Google Scholar 

  6. Hofer U (2018) The majority is uncultured. Nat Rev Microbiol 16:716–717

    Article  CAS  Google Scholar 

  7. Malmstrom RR, Eloe-Fadrosh EA (2019) Advancing genome-resolved metagenomics beyond the shotgun. mSystems 4:e00118-19

    Article  Google Scholar 

  8. Mehlin C, Boni E, Buckner FS et al (2006) Heterologous expression of proteins from Plasmodium falciparum: results from 1000 genes. Mol Biochem Parasitol 148:144–160

    Article  CAS  Google Scholar 

  9. Sambrook J, Russell DW (2006) The condensed protocols from molecular cloning: a laboratory manual. CSHL Press

    Google Scholar 

  10. Giovannelli D, Chung M, Staley J et al (2016) Sulfurovum riftiae sp. nov., a mesophilic, thiosulfate-oxidizing, nitrate-reducing chemolithotrophic Epsilonproteobacterium isolated from the tube of Riftia pachyptila, a deep-sea hydrothermal vent tube worm. Int J Syst Evol Microbiol 66(7):2697–2701

    Article  CAS  Google Scholar 

  11. Waite DW, Chuvochina MS, Hugenholtz P (2019) Road map of the Phylum Campylobacterota. In: Bergey’s manual of systematics of archaea and bacteria. American Cancer Society, pp 1–11

    Google Scholar 

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Acknowledgments

This work was partially supported by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No. 948972), NSF grant IOS 19-51690, and NASA grant 80NSSC21K0485.

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Correspondence to Angelina Cordone .

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Severino, A., Coppola, A., Correggia, M., Vetriani, C., Giovannelli, D., Cordone, A. (2022). From Sequences to Enzymes: Heterologous Expression of Genes from Marine Microbes. In: Verde, C., Giordano, D. (eds) Marine Genomics. Methods in Molecular Biology, vol 2498. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-2313-8_13

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  • DOI: https://doi.org/10.1007/978-1-0716-2313-8_13

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-2312-1

  • Online ISBN: 978-1-0716-2313-8

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