Skip to main content

cDNA Display-Mediated Immuno-PCR (cD-IPCR): An Ultrasensitive Immunoassay for Biomolecular Detection

  • Protocol
  • First Online:
Proteomic Profiling

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2261))

Abstract

Immuno-PCR (IPCR) is a sensitive antigen detection by means of specific antibody-DNA conjugates. To ensure the successful conjugation of a protein (an antibody) with a reporter DNA, immuno-PCR method based on cDNA display (cD-IPCR) has been introduced. The cDNA display molecule is a 1:1 covalent complex of a polypeptide and its encoding cDNA at the single molecule level, which is directly used for antigen detection and subsequent qPCR. This method can be applied to detect various antigens in biological samples, if sequences of their single-domain antibodies (VHHs) or peptide aptamers are known.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 139.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 179.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 249.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Sano T, Smith CL, Cantor CR (1992) Immuno-PCR: very sensitive antigen detection by means of specific antibody-DNA conjugates. Science 258(5079):120–122

    Article  CAS  Google Scholar 

  2. van Buggenum JAGL, Gerlach JP, Eising S, Schoonen L, van Eijl RAPM, Tanis SEJ, Hogeweg M, Hubner NC, van Hest JC, Bonger KM, Mulder KW (2016) A covalent and cleavable antibody-DNA conjugation strategy for sensitive protein detection via immuno-PCR. Sci Rep 6:22675

    Article  Google Scholar 

  3. Hendrickson ER, Truby TM, Joerger RD, Majarian WR, Ebersole RC (1995) High sensitivity multianalyte immunoassay using covalent DNA-labeled antibodies and polymerase chain reaction. Nucleic Acids Res 23(3):522–529

    Article  CAS  Google Scholar 

  4. Anzai H, Terai T, Jayathilake C, Suzuki T, Nemoto N (2019) A novel immuno-PCR method using cDNA display. Anal Biochem 578:1–6

    Article  CAS  Google Scholar 

  5. Jayathilake C, Terai T, Nemoto N (2019) cDNA display mediated Immuno-PCR (cD-IPCR): a novel PCR-based antigen detection method. Bio-protocol 9(24):e3457

    Article  CAS  Google Scholar 

  6. Jayathlake C, Kumachi S, Arai H, Motohashi M, Murakami A, Terai T, Nemoto N (2020) In vitro selection of anti-gliadin single-domain antibodies from a naïve library for cDNA-display mediated immuno-PCR. Anal Biochem 589(15):113490

    Article  Google Scholar 

  7. Yamaguchi J, Naimuddin M, Mni B, Sasaki T, Machida M, Kubo T, Funatsu T, Husimi Y, Nemoto N (2009) cDNA display: a novel screening method for functional disulfide-rich peptides by solid-phase synthesis and stabilization of mRNA-protein fusions. Nucleic Acids Res 37:e108

    Article  Google Scholar 

  8. Mochizuki Y, Biyani M, Tsuji-Ueno S, Suzuki M, Nishigaki K, Husimi Y, Nemoto N (2011) One-pot preparation of mRNA/cDNA display by a novel and versatile puromycin-linker DNA. ACS Comb Sci 13(5):478–485

    Article  CAS  Google Scholar 

  9. Mochizuki Y, Suzuki T, Fujimoto K, Nemoto N (2015) A versatile puromycin-linker using cnvK for mRNA/cDNA display by a novel. J Biotechnol 212:174–180

    Article  CAS  Google Scholar 

Download references

Acknowledgments

We are grateful to Dr. Takuya Terai, Hiroki Anzai, and Takeru Suzuki for helpful discussion. This work was, in part, supported by JSPS KAKENHI (15H05723 and 17K19471 to N.N.).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Naoto Nemoto .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Jayathilake, C., Nemoto, N. (2021). cDNA Display-Mediated Immuno-PCR (cD-IPCR): An Ultrasensitive Immunoassay for Biomolecular Detection. In: Posch, A. (eds) Proteomic Profiling. Methods in Molecular Biology, vol 2261. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1186-9_19

Download citation

  • DOI: https://doi.org/10.1007/978-1-0716-1186-9_19

  • Published:

  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-1185-2

  • Online ISBN: 978-1-0716-1186-9

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics