Skip to main content

MicroCT for Scanning and Analysis of Mouse Bones

  • Protocol
  • First Online:
Skeletal Development and Repair

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2230))

Abstract

The purpose of this Chapter is to present a detailed description of methods for performing bone Micro-Computed Tomography (microCT) scanning and analysis. MicroCT is an x-ray imaging method capable of visualizing bone at the micro-structural scale, that is, 1-100 µm resolution. MicroCT is the gold-standard method for assessment of 3D bone morphology in studies of small animals. As applied to the small bones of mice or rats, microCT can efficiently and accurately assess bone structure (e.g., cortical bone area [Ct.Ar]) and micro-structure (e.g., trabecular bone volume fraction [Tb.BV/TV]). The particular application described herein is for post mortem mouse femur specimens. The material presented should be generally applicable to many commercially available laboratory microCT systems, although some details are specific to the system used in our lab (Scanco mCT 40; SCANCO Medical AG, Bruttisellen, Switzerland).

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 99.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 129.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 199.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Bouxsein ML, Boyd SK, Christiansen BA, Guldberg RE, Jepsen KJ, Muller R (2010) Guidelines for assessment of bone microstructure in rodents using micro-computed tomography. J Bone Miner Res 25(7):1468–1486. https://doi.org/10.1002/jbmr.141

    Article  PubMed  Google Scholar 

  2. Alexander JM, Bab I, Fish S, Muller R, Uchiyama T, Gronowicz G, Nahounou M, Zhao Q, White DW, Chorev M, Gazit D, Rosenblatt M (2001) Human parathyroid hormone 1-34 reverses bone loss in ovariectomized mice. J Bone Miner Res 16(9):1665–1673. https://doi.org/10.1359/jbmr.2001.16.9.1665

    Article  CAS  PubMed  Google Scholar 

  3. Bonnet N, Laroche N, Vico L, Dolleans E, Courteix D, Benhamou CL (2009) Assessment of trabecular bone microarchitecture by two different x-ray microcomputed tomographs: a comparative study of the rat distal tibia using Skyscan and Scanco devices. Med Phys 36(4):1286–1297. https://doi.org/10.1118/1.3096605

    Article  CAS  PubMed  Google Scholar 

  4. Christiansen BA (2016) Effect of micro-computed tomography voxel size and segmentation method on trabecular bone microstructure measures in mice. Bone Rep 5:136–140. https://doi.org/10.1016/j.bonr.2016.05.006

    Article  PubMed  PubMed Central  Google Scholar 

  5. Nazarian A, Snyder BD, Zurakowski D, Muller R (2008) Quantitative micro-computed tomography: a non-invasive method to assess equivalent bone mineral density. Bone 43(2):302–311. https://doi.org/10.1016/j.bone.2008.04.009

    Article  PubMed  Google Scholar 

  6. Hildebrand T, Ruegsegger P (1997) A new method for the model-independent assessment of thickness in three-dimensional images. J Microsc 185(1):67–75. https://doi.org/10.1046/j.1365-2818.1997.1340694.x

    Article  Google Scholar 

  7. Hildebrand T, Laib A, Muller R, Dequeker J, Ruegsegger P (1999) Direct three-dimensional morphometric analysis of human cancellous bone: microstructural data from spine, femur, iliac crest, and calcaneus. J Bone Miner Res 14(7):1167–1174. https://doi.org/10.1359/jbmr.1999.14.7.1167

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

Washington University Musculoskeletal Research Center (NIH/NIAMS P30 AR074992).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Matthew J. Silva .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 Springer Science+Business Media, LLC, part of Springer Nature

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Kim, Y., Brodt, M.D., Tang, S.Y., Silva, M.J. (2021). MicroCT for Scanning and Analysis of Mouse Bones. In: Hilton, M.J. (eds) Skeletal Development and Repair. Methods in Molecular Biology, vol 2230. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1028-2_11

Download citation

  • DOI: https://doi.org/10.1007/978-1-0716-1028-2_11

  • Published:

  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-1027-5

  • Online ISBN: 978-1-0716-1028-2

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics