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Multi-atlas-Based Segmentation of the Left Atrium and Pulmonary Veins

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Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 8330))

Abstract

This paper presents a multi-atlas segmentation approach concerning the left atrium and pulmonary veins in pre-operative CT images in order to plan ablation therapy in patients with atrial fibrillation. The segmentation procedure is composed of an atlas-based segmentation followed by a region-growing method. The atlas-based segmentation step exploits the a priori knowledge of existing structures to extract the inner region of the left atrium. The output of the atlas-based segmentation is then eroded to be used as seed volume in the region-growing procedure. This step adds new voxels according to a criterion which uses the intensity information of the input image.

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References

  1. Cox, J.: Atrial fibrillation II: Rationale for surgical treatment. The Journal of Thoracic and Cardiovascular Surgery 126, 1693–1699 (2003)

    Article  Google Scholar 

  2. Schwartzman, D., Lacomis, J., Wigginton, W.: Characterization of left atrium and distal pulmonary vein morphology using multidimensional computed tomography. Journal of the American College of Cardiology 41(8), 1349–1357 (2003)

    Article  Google Scholar 

  3. Zheng, Y., Jhon, M., Boese, J., Comaniciu, D.: Precise segmentation of the left atrium in C-arm CT volumes with applications to atrial fibrillation ablation. In: 9th IEEE International Symposium on Biomedical Imaging (ISBI), pp. 1421–1424 (2012)

    Google Scholar 

  4. Ecabert, O., Peters, J., Schramm, H., Lorenz, C., Von Berg, J., Walker, M.J., Vembar, M., Olszewski, M.E., Subramanyan, K., Lavi, G., Weese, J.: Automatic Model-Based Segmentation of the Heart in CT Images. IEEE Transactions Medical Imaging 27(9), 1189–1201 (2008)

    Article  Google Scholar 

  5. Zuluaga, M.A., Jorge Cardoso, M., Modat, M., Ourselin, S.: Multi-atlas propagation whole heart segmentation from MRI and CTA using a local normalised correlation coefficient criterion. In: Ourselin, S., Rueckert, D., Smith, N. (eds.) FIMH 2013. LNCS, vol. 7945, pp. 174–181. Springer, Heidelberg (2013)

    Chapter  Google Scholar 

  6. Karim, R., Mohiaddin, R., Rueckert, D.: Left atrium segmentation for atrial fibrillation ablation. In: Proc. of SPIE Medical imaging (2008)

    Google Scholar 

  7. Zhu, L., Gao, Y., Yezzi, A., MacLeod, R., Cates, J., Tannenbaum, A.: Automatic segmentation of the left atrium from MRI images using salient feature and contour evolution. In: 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pp. 3211–3214 (2012)

    Google Scholar 

  8. Leung, K., Barnes, J., Modat, M., Ridgway, G., Bartlett, J., Fox, N., Ourselin, S.: Automated brain extraction using multi-atlas propagation and segmentation (MAPS). In: 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp. 2053–2056 (2011)

    Google Scholar 

  9. Acosta, O., Simon, A., Monge, F., Commandeur, F., Bassirou, C., Cazoulat, G., de Crevoisier, R., Haigron, P.: Evaluation of multi-atlas-based segmentation of CT scans in prostate cancer radiotherapy. In: 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp. 1966–1969 (2011)

    Google Scholar 

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© 2014 Springer-Verlag Berlin Heidelberg

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Sandoval, Z., Betancur, J., Dillenseger, JL. (2014). Multi-atlas-Based Segmentation of the Left Atrium and Pulmonary Veins. In: Camara, O., Mansi, T., Pop, M., Rhode, K., Sermesant, M., Young, A. (eds) Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges. STACOM 2013. Lecture Notes in Computer Science, vol 8330. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-54268-8_3

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  • DOI: https://doi.org/10.1007/978-3-642-54268-8_3

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-54267-1

  • Online ISBN: 978-3-642-54268-8

  • eBook Packages: Computer ScienceComputer Science (R0)

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