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Nucleotide Exchange Factors for Hsp70 Chaperones

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Molecular Chaperones

Part of the book series: Methods in Molecular Biology ((MIMB,volume 787))

Abstract

The ATPase cycle of Hsp70 chaperones controls their transient association with substrate and, thus, governs their function in protein folding. Nucleotide exchange factors (NEFs) accelerate ADP release from Hsp70 which results in rebinding of ATP and release of the substrate. This chapter describes several methods suitable to study NEFs of Hsp70 chaperones. On the one hand, steady-state ATPase assays provide information on how the NEF influences progression of the Hsp70 through the entire ATPase cycle. On the other hand, nucleotide release can be measured directly using labeled nucleotides, which enables identification and further characterization of NEFs.

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References

  1. Mayer, M. P., and Bukau, B. (2005) Hsp70 chaperones: cellular functions and molecular mechanism, Cell Mol Life Sci 62, 670–684.

    Article  PubMed  CAS  Google Scholar 

  2. Harrison, C. J., Hayer-Hartl, M., Di Liberto, M., Hartl, F., and Kuriyan, J. (1997) Crystal structure of the nucleotide exchange factor GrpE bound to the ATPase domain of the molecular chaperone DnaK, Science 276, 431–435.

    Article  PubMed  CAS  Google Scholar 

  3. Sondermann, H., Scheufler, C., Schneider, C., Hohfeld, J., Hartl, F. U., and Moarefi, I. (2001) Structure of a Bag/Hsc70 complex: convergent functional evolution of Hsp70 nucleotide exchange factors, Science 291, 1553–1557.

    Article  PubMed  CAS  Google Scholar 

  4. Shomura, Y., Dragovic, Z., Chang, H. C., Tzvetkov, N., Young, J. C., Brodsky, J. L., Guerriero, V., Hartl, F. U., and Bracher, A. (2005) Regulation of Hsp70 function by HspBP1: structural analysis reveals an alternate mechanism for Hsp70 nucleotide exchange, Mol Cell 17, 367–379.

    PubMed  CAS  Google Scholar 

  5. Polier, S., Dragovic, Z., Hartl, F. U., and Bracher, A. (2008) Structural basis for the cooperation of Hsp70 and Hsp110 chaperones in protein folding, Cell 133, 1068–1079.

    Article  PubMed  CAS  Google Scholar 

  6. Schuermann, J. P., Jiang, J., Cuellar, J., Llorca, O., Wang, L., Gimenez, L. E., Jin, S., Taylor, A. B., Demeler, B., Morano, K. A., Hart, P. J., Valpuesta, J. M., Lafer, E. M., and Sousa, R. (2008) Structure of the Hsp110:Hsc70 nucleotide exchange machine, Mol Cell 31, 232–243.

    Article  PubMed  CAS  Google Scholar 

  7. Andreasson, C., Fiaux, J., Rampelt, H., Druffel-Augustin, S., and Bukau, B. (2008) Insights into the structural dynamics of the Hsp110-Hsp70 interaction reveal the mechanism for nucleotide exchange activity, Proc Natl Acad Sci U S A 105, 16519–16524.

    Article  PubMed  CAS  Google Scholar 

  8. Xu, Z., Page, R. C., Gomes, M. M., Kohli, E., Nix, J. C., Herr, A. B., Patterson, C., and Misra, S. (2008) Structural basis of nucleotide exchange and client binding by the Hsp70 cochaperone Bag2, Nat Struct Mol Biol 15, 1309–1317.

    Article  PubMed  CAS  Google Scholar 

  9. McCarty, J. S., Buchberger, A., Reinstein, J., and Bukau, B. (1995) The role of ATP in the functional cycle of the DnaK chaperone system, J Mol Biol 249, 126–137.

    Article  PubMed  CAS  Google Scholar 

  10. Laufen, T., Mayer, M. P., Beisel, C., Klostermeier, D., Mogk, A., Reinstein, J., and Bukau, B. (1999) Mechanism of regulation of hsp70 chaperones by DnaJ cochaperones, Proc Natl Acad Sci U S A 96, 5452–5457.

    Article  PubMed  CAS  Google Scholar 

  11. Jiang, R. F., Greener, T., Barouch, W., Greene, L., and Eisenberg, E. (1997) Interaction of auxilin with the molecular chaperone, Hsc70, J Biol Chem 272, 6141–6145.

    Article  PubMed  CAS  Google Scholar 

  12. Bimston, D., Song, J., Winchester, D., Takayama, S., Reed, J. C., and Morimoto, R. I. (1998) BAG-1, a negative regulator of Hsp70 chaperone activity, uncouples nucleotide hydrolysis from substrate release, Embo J 17, 6871–6878.

    Article  PubMed  CAS  Google Scholar 

  13. Packschies, L., Theyssen, H., Buchberger, A., Bukau, B., Goody, R. S., and Reinstein, J. (1997) GrpE accelerates nucleotide exchange of the molecular chaperone DnaK with an associative displacement mechanism, Biochemistry 36, 3417–3422.

    Article  PubMed  CAS  Google Scholar 

  14. Raviol, H., Sadlish, H., Rodriguez, F., Mayer, M. P., and Bukau, B. (2006) Chaperone network in the yeast cytosol: Hsp110 is revealed as an Hsp70 nucleotide exchange factor, Embo J 25, 2510–2518.

    Article  PubMed  CAS  Google Scholar 

  15. Raynes, D. A., and Guerriero, V., Jr. (1998) Inhibition of Hsp70 ATPase activity and protein renaturation by a novel Hsp70-binding protein, J Biol Chem 273, 32883–32888.

    Article  PubMed  CAS  Google Scholar 

  16. Gassler, C. S., Wiederkehr, T., Brehmer, D., Bukau, B., and Mayer, M. P. (2001) Bag-1 M accelerates nucleotide release for human Hsc70 and Hsp70 and can act concentration-dependent as positive and negative cofactor, J Biol Chem 276, 32538–32544.

    Article  PubMed  CAS  Google Scholar 

  17. Kabani, M., Beckerich, J. M., and Brodsky, J. L. (2002) Nucleotide exchange factor for the yeast Hsp70 molecular chaperone Ssa1p, Mol Cell Biol 22, 4677–4689.

    Article  PubMed  CAS  Google Scholar 

  18. Ali, J. A., Jackson, A. P., Howells, A. J., and Maxwell, A. (1993) The 43-kilodalton N-terminal fragment of the DNA gyrase B protein hydrolyzes ATP and binds coumarin drugs, Biochemistry 32, 2717–2724.

    Article  PubMed  CAS  Google Scholar 

  19. O’Brien, M. C., Flaherty, K. M., and McKay, D. B. (1996) Lysine 71 of the chaperone protein Hsc70 Is essential for ATP hydrolysis, J Biol Chem 271, 15874–15878.

    Article  PubMed  Google Scholar 

  20. Ha, J. H., and McKay, D. B. (1994) ATPase kinetics of recombinant bovine 70 kDa heat shock cognate protein and its amino-terminal ATPase domain, Biochemistry 33, 14625–14635.

    Article  PubMed  CAS  Google Scholar 

  21. Liberek, K., Marszalek, J., Ang, D., Georgo-poulos, C., and Zylicz, M. (1991) Escherichia coli DnaJ and GrpE heat shock proteins jointly stimulate ATPase activity of DnaK, Proc Natl Acad Sci U S A 88, 2874–2878.

    Article  PubMed  CAS  Google Scholar 

  22. Theyssen, H., Schuster, H. P., Packschies, L., Bukau, B., and Reinstein, J. (1996) The second step of ATP binding to DnaK induces peptide release, J Mol Biol 263, 657–670.

    Article  PubMed  CAS  Google Scholar 

  23. Leskovar, A., and Reinstein, J. (2008) Photophysical properties of popular fluorescent adenosine nucleotide analogs used in enzyme mechanism probing, Arch Biochem Biophys 473, 16–24.

    PubMed  CAS  Google Scholar 

  24. O’Brien, M. C., and McKay, D. B. (1995) How potassium affects the activity of the molecular chaperone Hsc70. I. Potassium is required for optimal ATPase activity, J Biol Chem 270, 2247–2250.

    Article  PubMed  Google Scholar 

  25. Wilbanks, S. M., and McKay, D. B. (1995) How potassium affects the activity of the molecular chaperone Hsc70. II. Potassium binds specifically in the ATPase active site, J Biol Chem 270, 2251–2257.

    Article  PubMed  CAS  Google Scholar 

  26. O’Brien, M. C., and McKay, D. B. (1993) Threonine 204 of the chaperone protein Hsc70 influences the structure of the active site, but is not essential for ATP hydrolysis, J Biol Chem 268, 24323–24329.

    PubMed  Google Scholar 

  27. Buchberger, A., Valencia, A., McMacken, R., Sander, C., and Bukau, B. (1994) The chaperone function of DnaK requires the coupling of ATPase activity with substrate binding through residue E171, Embo J 13, 1687–1695.

    PubMed  CAS  Google Scholar 

  28. Wei, J., and Hendershot, L. M. (1995) Characterization of the nucleotide binding properties and ATPase activity of recombinant hamster BiP purified from bacteria, J Biol Chem 270, 26670–26676.

    Article  PubMed  CAS  Google Scholar 

  29. Andreasson, C., Fiaux, J., Rampelt, H., Mayer, M. P., and Bukau, B. (2008) Hsp110 is a nucleotide-activated exchange factor for Hsp70, J Biol Chem 283, 8877–8884.

    Article  PubMed  CAS  Google Scholar 

  30. Hohfeld, J., and Jentsch, S. (1997) GrpE-like regulation of the hsc70 chaperone by the anti-apoptotic protein BAG-1, Embo J 16, 6209–6216.

    Article  PubMed  CAS  Google Scholar 

  31. Dragovic, Z., Broadley, S. A., Shomura, Y., Bracher, A., and Hartl, F. U. (2006) Molecular chaperones of the Hsp110 family act as nucleotide exchange factors of Hsp70s, Embo J 25, 2519–2528.

    Article  PubMed  CAS  Google Scholar 

  32. Steel, G. J., Fullerton, D. M., Tyson, J. R., and Stirling, C. J. (2004) Coordinated activation of Hsp70 chaperones, Science 303, 98–101.

    Article  PubMed  CAS  Google Scholar 

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Correspondence to Bernd Bukau .

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Rampelt, H., Mayer, M.P., Bukau, B. (2011). Nucleotide Exchange Factors for Hsp70 Chaperones. In: Calderwood, S., Prince, T. (eds) Molecular Chaperones. Methods in Molecular Biology, vol 787. Humana Press. https://doi.org/10.1007/978-1-61779-295-3_7

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  • DOI: https://doi.org/10.1007/978-1-61779-295-3_7

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  • Publisher Name: Humana Press

  • Print ISBN: 978-1-61779-294-6

  • Online ISBN: 978-1-61779-295-3

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