WABI 2021

Articles (8 in this collection)

1. Treewidth-based algorithms for the small parsimony problem on networks

   Authors

   • Celine Scornavacca
   • Mathias Weller

   • Content type: Research
   • Open Access
   • Published: 20 August 2022

   • Article: 15

   

2. Binning long reads in metagenomics datasets using composition and coverage information

   Authors

   • Anuradha Wickramarachchi
   • Yu Lin

   • Content type: Research
   • Open Access
   • Published: 11 July 2022

   • Article: 14

   

3. Embedding gene trees into phylogenetic networks by conflict resolution algorithms

   Authors (first, second and last of 5)

   • Marcin Wawerka
   • Dawid Dąbkowski
   • Paweł Górecki

   • Content type: Research
   • Open Access
   • Published: 19 May 2022

   • Article: 11

   

4. Efficient privacy-preserving variable-length substring match for genome sequence

   Authors

   • Yoshiki Nakagawa
   • Satsuya Ohata
   • Kana Shimizu

   • Content type: Research
   • Open Access
   • Published: 26 April 2022

   • Article: 9

   

5. Perplexity: evaluating transcript abundance estimation in the absence of ground truth

   Authors

   • Jason Fan
   • Skylar Chan
   • Rob Patro

   • Content type: Research
   • Open Access
   • Published: 25 March 2022

   • Article: 6

   

6. Space-efficient representation of genomic k-mer count tables

   Authors

   • Yoshihiro Shibuya
   • Djamal Belazzougui
   • Gregory Kucherov

   • Content type: Research
   • Open Access
   • Published: 21 March 2022

   • Article: 5

   

7. Fast characterization of segmental duplication structure in multiple genome assemblies

   Authors (first, second and last of 4)

   • Hamza Išerić
   • Can Alkan
   • Ibrahim Numanagić

   • Content type: Research
   • Open Access
   • Published: 18 March 2022

   • Article: 4

   

8. Parsimonious Clone Tree Integration in cancer

   Authors

   • Palash Sashittal
   • Simone Zaccaria
   • Mohammed El-Kebir

   • Content type: Research
   • Open Access
   • Published: 14 March 2022

   • Article: 3