Abstract
Traditional Chinese medicine (TCM) is a bright pearl in the treasure house of healthcare applications that has attracted increasing attention due to its huge applying potential, especially in the prevention and intervention of COVID-19 Pandemic. Such applications for healthcare decision-making are powerful tools to help provide actionable and explainable medical services to patients, but they are a knowledge-driven system and rely on knowledge graphs. However, most of TCM-related materials and guidebooks are preserved in the form of documents, lacking structured information and conceptual knowledge. To facility the study of domain-specific knowledge graphs in TCM, we define the ontology of knowledge graph in TCM with 29 types of entities and 32 types of relations, and then annotate a high-quality dataset (TCM-ERE) for Entity and Relation Extraction (E &RE) aligning with the concepts of the TCM-ontology. More than 40% of relations can only be inferred from multiple sentences in TCM-ERE, thus it can also be used for Chinese document-level E &RE research. The baseline models trained on the TCM-ERE are used to extract fact triples from TCM medical records for the enriching scale of the TCM-related knowledge graph (TCM-KG). TCM-ERE, TCM-KG and the baseline models are publicly available at https://gitee.com/yi_zhi_wei/acup1.git.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Notes
References
Bollacker, K., Evans, C., Paritosh, P., Sturge, T., Taylor, J.: Freebase: a collaboratively created graph database for structuring human knowledge. In: Proceedings of the 2008 ACM SIGMOD International Conference on Management of Data, pp. 1247–1250 (2008)
Chang, D., et al.: DiaKG: an annotated diabetes dataset for medical knowledge graph construction. In: Qin, B., Jin, Z., Wang, H., Pan, J., Liu, Y., An, B. (eds.) CCKS 2021. CCIS, vol. 1466, pp. 308–314. Springer, Singapore (2021). https://doi.org/10.1007/978-981-16-6471-7_26
Fan, L., Ming-Qiang, W., Ling-Xiang, L., Li-Yun, H.: Exploration on construction method of knowledge graph of veteran TCM physicians’ clinical experiences. Chin. J. Tradit. Chin. Med. Pharm. (2021)
Jia, L., et al.: Construction of traditional Chinese medicine knowledge graph. J. Med. Inform. 51–53 (2015)
Kenton, J.D.M.W.C., Toutanova, L.K.: BERT: pre-training of deep bidirectional transformers for language understanding. In: Proceedings of NAACL-HLT, pp. 4171–4186 (2019)
Lan, Z., Chen, M., Goodman, S., Gimpel, K., Sharma, P., Soricut, R.: Albert: a lite BERT for self-supervised learning of language representations. arXiv preprint arXiv:1909.11942 (2019)
Liu, Q., Li, Y., Duan, H., Liu, Y., Qin, Z.: Knowledge graph construction techniques. J. Comput. Res. Dev. 53(3), 582–600 (2016)
Liu, Y., et al.: Roberta: a robustly optimized BERT pretraining approach. arXiv preprint arXiv:1907.11692 (2019)
Mao, H., Zhang, B., Xu, H., Gao, K.: An end-to-end traditional Chinese medicine constitution assessment system based on multimodal clinical feature representation and fusion. In: Proceedings of the AAAI (2022)
Miao, F., Liu, H., Huang, Y., Liu, C., Wu, X.: Construction of semantic-based traditional Chinese medicine prescription knowledge graph. In: 2018 IEEE 3rd Advanced Information Technology, Electronic and Automation Control Conference (IAEAC), pp. 1194–1198. IEEE (2018)
Sun, Y., et al.: Ernie 2.0: a continual pre-training framework for language understanding. In: Proceedings of the AAAI Conference on Artificial Intelligence. vol. 34, pp. 8968–8975 (2020)
Tian, Y., et al.: Research and implementation of real world traditional Chinese medicine clinical scientific research information electronic medical record sharing system. In: Proceedings of the BIBM (2022)
Tong, R., Sun, C.l., Wang, H.F., Fang, Z., Yin, Y.: Construction of traditional Chinese medicine knowledge graph and its application. J. Med. Intell. 37(4), 8–13 (2016)
Tong, Y., Jing-hua, L., Qi, Y.: The construction and application of knowledge mapping of health preservation of traditional Chinese medicine. Chin. Digit. Med. 12(12), 3 (2017)
Yan-Rong, L., Yi, Z., Di, L., Dong-Ping, Q., Hai-Yan, S.: Constructing a medical knowledge graph of nephropathy based on the electronic medical records of nephropathy specialists. J. Southwest Univ. (Nat. Sci. Ed.) 42(11), 52–58 (2020)
Yao, Y., et al.: DocRED: a large-scale document-level relation extraction dataset. In: Proceedings of the 57th Annual Meeting of the Association for Computational Linguistics, pp. 764–777 (2019)
Yu, T.: Knowledge graph for TCM health preservation: design, construction, and applications. Artif. Intell. Med. 77, 48–52 (2017)
Zhang, L.X., et al.: TCMSID: a simplified integrated database for drug discovery from traditional Chinese medicine. J. Cheminformatics 14(1), 1–11 (2022)
Acknowledgment
This work is partially supported by the National Key R &D Program of China (Grant 2022YFF0903100), the Key Research and Development Program of Shandong Province (Grant 2020CXGC010903), the National Natural Science Foundation of China (Grant 62073103), the Leading Benefiting People Fund Of Qingdao Science and Technology (21-1-4-rkjk-16-nsh), and the Mount Taishan Scholar Project Special Fund.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2023 The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd.
About this paper
Cite this paper
Yi, Z. et al. (2023). Knowledge Graph Construction for Healthcare Services in Traditional Chinese Medicine. In: Wang, Z., Wang, S., Xu, H. (eds) Service Science. ICSS 2023. Communications in Computer and Information Science, vol 1844. Springer, Singapore. https://doi.org/10.1007/978-981-99-4402-6_23
Download citation
DOI: https://doi.org/10.1007/978-981-99-4402-6_23
Published:
Publisher Name: Springer, Singapore
Print ISBN: 978-981-99-4401-9
Online ISBN: 978-981-99-4402-6
eBook Packages: Computer ScienceComputer Science (R0)