Abstract
Rapid pathogenic detection of Escherichia coli (E. coli) bacteria is vitally important in medical and pharmaceutical companies, environmental monitoring, and biomedical research. In this work, a double-decker ring resonator (DDRR) with resonant mode numbers of 9 and 11 is fabricated from a nano-core slab waveguide from Si3N4 placed on a coring 7980 silica substrate is used for detection of E. coli bacterium in water. The sensor’s performance is studied for four waveguide layouts, and the effect of evanescent field penetration depth on volume sample is studied. Results simulated using the signal flow graph method and MATLAB software. The maximum sensitivity of the DDRR sensor is measured to be 605 nm/RIU, which corresponds to high-resolution sensing of 1.82 × 10–6 RIU. Results show that increasing the height of the superstrate sensing window waveguide to four times the height of the core layer contributes to improve the sensitivity.
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References
Choi, V.M., et al.: Activation of Bacteroides fragilis toxin by a novel bacterial protease contributes to anaerobic sepsis in mice. Nat. Med. 22(5), 563–567 (2016)
Kalate Seyfari, A., Zareian, A.H., Bahadoran, M.: Design and simulation of four stage antiresonant reflecting plasmonic microring biosensor for detection of Ecoli Bacterium-O157 in water. J. Res. Many-body Syst. 10(4), 47–62 (2021)
Janik, M., et al.: Live E. coli bacteria label-free sensing using a microcavity in-line Mach-Zehnder interferometer. Sci. Rep. 8(1), 1–8 (2018)
Bej, A.K., et al.: Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for uid. Appl. Environ. Microbiol. 57(4), 1013–1017 (1991)
Zhu, J., Hill, J.E.: Detection of Escherichia coli via VOC profiling using secondary electrospray ionization-mass spectrometry (SESI-MS). Food Microbiol. 34(2), 412–417 (2013)
Baeumner, A.J., et al.: RNA biosensor for the rapid detection of viable Escherichia coli in drinking water. Biosens. Bioelectron. 18(4), 405–413 (2003)
Frahm, E., Obst, U.: Application of the fluorogenic probe technique (TaqMan PCR) to the detection of Enterococcus spp. and Escherichia coli in water samples. J. Microbiol. Methods 52(1), 123–131 (2003)
Min, J., Baeumner, A.J.: Highly sensitive and specific detection of viable Escherichia coli in drinking water. Anal. Biochem. 303(2), 186–193 (2002)
Lyons, E., et al.: Using genomic sequencing for classical genetics in E. coli K12. PloS one 6(2), e16717 (2011)
Yang, D., et al.: Reproducible E. coli detection based on label-free SERS and mapping. Talanta 146, 457–463 (2016)
Daly, P., Collier, T., Doyle, S.: PCR-ELISA detection of Escherichia coli in milk. Lett. Appl. Microbiol. 34(3), 222–226 (2002)
Johnson, R.P., et al.: Detection of Escherichia coli O157: H7 in meat by an enzyme-linked immunosorbent assay. EHEC-Tek. Appl. Environ. Microbiol. 61(1), 386–388 (1995)
Cinel, N.A., Bütün, S., Özbay, E.: Electron beam lithography designed silver nano-disks used as label free nano-biosensors based on localized surface plasmon resonance. Opt. Express 20(3), 2587–2597 (2012)
Liu, X., et al.: Amperometric glucose biosensor with remarkable acid stability based on glucose oxidase entrapped in colloidal gold-modified carbon ionic liquid electrode. Biosens. Bioelectron. 25(12), 2675–2679 (2010)
Llandro, J., et al.: Magnetic biosensor technologies for medical applications: a review. Med. Biol. Eng. Compu. 48(10), 977–998 (2010)
Sanati, P., et al.: Detection of Escherichia coli K12 in water using slot waveguide in cascaded ring resonator. Silicon 1–7 (2021)
Bahadoran, M., et al.: Detection of Salmonella bacterium in drinking water using microring resonator. Artif. Cells Nanomed Biotech. 44(1), 315–321 (2016)
Sanati, P., et al.: Label-free biosensor array comprised of Vernier microring resonator and 3 × 3 optical coupler. Eur. Phys. J. Plus 135(11), 869 (2020)
Zhao, W., Xu, J.J., Chen, H.Y.: Electrochemical biosensors based on layer‐by‐layer assemblies. Electroanalysis: Int. J. Devoted Fundam. Pract. Aspects Electroanalysis 18(18), 1737–1748 (2006)
Gao, J., et al.: Vapor sensors based on optical interferometry from oxidized microporous silicon films. Langmuir 18(6), 2229–2233 (2002)
Schmitt, K., et al.: Interferometric biosensor based on planar optical waveguide sensor chips for label-free detection of surface bound bioreactions. Biosens. Bioelectron. 22(11), 2591–2597 (2007)
Liu, X., et al.: A label-free electrochemical biosensor based on ligand-receptor interaction. In: 2018 IEEE International Conference on Manipulation, Manufacturing and Measurement on the Nanoscale (3M-NANO), pp. 341–344. IEEE (2018)
Seyfari, A.K., Bahadoran, M., Aghili, A.: Ultra-sensitive pressure sensor using double stage racetrack silicon micro resonator. Opt. Quant. Electron. 52(9), 408 (2020)
Aziz, M., et al.: Theoretical study on slow-light generated by integrated microring resonator with wide bandwidth and high gain. Jurnal Teknologi 78(3), 293–300 (2016)
Amiri, I., Afroozeh, A., Bahadoran, M.: Simulation and analysis of multisoliton generation using a PANDA ring resonator system. Chin. Phys. Lett. 28(10), 104205 (2011)
Bahadoran, M., et al.: Realizing unique bifurcation model in a cascaded microring feedback circuit. Opt. Quant. Electron. 52(216), 1–14 (2020)
Amiri, I., et al.: Dual wavelength optical duobinary modulation using GaAs–AlGaAs microring resonator. Results Phys. 11, 1087–1093 (2018)
Claes, T., Bogaerts, W., Bienstman, P.: Experimental characterization of a silicon photonic biosensor consisting of two cascaded ring resonators based on the Vernier-effect and introduction of a curve fitting method for an improved detection limit. Opt. Express 18(22), 22747–22761 (2010)
Bahadoran, M., et al.: Modeling and analysis of a microresonating biosensor for detection of Salmonella Bacteria in human blood. Sensors 14(7), 12885–12899 (2014)
Sirawattananon, C., et al.: Analytical vernier effects of a PANDA ring resonator for microforce sensing application. IEEE Trans. Nanotechnol. 11(4), 707–712 (2012)
Seyfari, A.K., Bahadoran, M., Yupapin, P.: Design and modeling of double Panda-microring resonator as multi-band optical filter. Nano Commun. Netw. 29, 100352 (2021)
Bahadoran, M., et al.: Nano force sensing using symmetric double stage micro resonator. Measurement 58, 215–220 (2014)
Bahadoran, M., et al.: Bifurcation behaviors generated by Panda-ring control circuit. Microw. Opt. Technol. Lett. 61(7), 1783–1787 (2019)
Jin, L., Li, M., He, J.-J.: Highly-sensitive silicon-on-insulator sensor based on two cascaded micro-ring resonators with vernier effect. Opt. Commun. 284(1), 156–159 (2011)
Bahadoran, M., Ali, J., Yupapin, P.: Ultrafast all-optical switching using signal flow graph for PANDA resonator. Appl. Opt. 52(12), 2866–2873 (2013)
Bahadoran, M., Ali, J., Yupapin, P.: Graphical approach for nonlinear optical switching by PANDA vernier filter. IEEE Photonics Technol. Lett. 25(15), 1470–1473 (2013)
Bahadoran, M., et al.: Novel Approach to determine the young’s modulus in silicon-on-insulator waveguide using microring resonator. Dig. J. Nanomater. Biostruct. 9(3), 1095–1104 (2014)
Aziz, M., et al.: Light pulse in a modified add-drop optical filter for optical tweezers generation. J. Nonlinear Opt. Phys. Mater. 21(04), (2012)
Boeck, R., et al.: Series-coupled silicon racetrack resonators and the Vernier effect: theory and measurement. Opt. Express 18(24), 25151–25157 (2010)
Bahadoran, M., Yupapin, P., Amiri, I.S.: Optimum light transmission via microring resonator under a lossy-coupler critical coupling condition. Microw. Opt. Technol. Lett. 63(2), 653–661 (2021)
Shafiee, A., Bahadoran, M., Yupapin, P.: Analytical microring stereo system using coupled mode theory and application. Appl. Opt. 58(30), 8167–8173 (2019)
Bahadoran, M., Yupapin, P.: Butterfly-like phase shift: a novel gauge for critical coupling of add–drop resonator. J. Theoret. Appl. Phys. 12(2), 127–134 (2018)
Nawi, I., et al.: A theoretical model of all-optical switching induced by a soliton pulse in nano-waveguide ring resonator. Journal of Physics: Conference Series, vol. 431, pp. 012029. IOP Publishing (2013)
Bahadoran, M., et al.: Slow light generation using microring resonators for optical buffer application. Opt. Eng. 51(4), 044601–044608 (2012)
Dai, D., et al.: Low-loss Si 3 N 4 arrayed-waveguide grating (de) multiplexer using nano-core optical waveguides. Opt. Express 19(15), 14130–14136 (2011)
Akbari, E., et al.: Escherichia coli bacteria detection by using graphene-based biosensor. IET Nanobiotechnol. 9(5), 273–279 (2015)
Zibaii, M.I., et al.: Measuring bacterial growth by refractive index tapered fiber optic biosensor. J. Photochem. Photobiol. B 101(3), 313–320 (2010)
Balaev, A.E., Dvoretski, K.N., Doubrovski, V.A.: Determination of refractive index of rod-shaped bacteria from spectral extinction measurements. In: Saratov Fall Meeting 2002: Optical Technologies in Biophysics and Medicine IV, vol. 5068, pp. 375–380. International Society for Optics and Photonics (2003)
Bahadoran, M., Amiri, I.S.: Double critical coupled ring resonator-based add–drop filters. J Theor. Appl. Phys. 13, 213–220 (2019)
Yariv, A.: Critical coupling and its control in optical waveguide-ring resonator systems. IEEE Photonics Technol. Lett. 14(4), 483–485 (2002)
Yariv, A.: Universal relations for coupling of optical power between microresonators and dielectric waveguides. Electron. Lett. 36(4), 321–322 (2000)
Roy, S.K., Sharan, P.: Design of ultra-high sensitive biosensor to detect E. Coli in water. Int. J. Inf. Technol. 12(3), 1–6 (2019)
Acknowledgements
The authors would like to acknowledge the research facilities of Shiraz University of Medical Sciences, Iran, and Universiti Teknologi MARA, Cawangan Johor, Malaysia
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Sanati, P., Bahadoran, M., Mohamad, S.N. (2022). Effect of Sample Volume in Escherichia Coli Detection in Water Using Double-Decker Resonator. In: Kaiser, M.S., Ray, K., Bandyopadhyay, A., Jacob, K., Long, K.S. (eds) Proceedings of the Third International Conference on Trends in Computational and Cognitive Engineering. Lecture Notes in Networks and Systems, vol 348. Springer, Singapore. https://doi.org/10.1007/978-981-16-7597-3_13
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DOI: https://doi.org/10.1007/978-981-16-7597-3_13
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