Skip to main content

Optogenetics on Zebrafish

  • Chapter
  • First Online:
Book cover Optogenetics

Part of the book series: Advances in Experimental Medicine and Biology ((AEMB,volume 1293))

Abstract

Optogenetics brought noninvasive neural activation in living organisms. Transparent zebrafish larva is one of the suitable animal models that receive the full benefit of this technique and provides behavioral studies based on intact individual nervous system. In this chapter, we describe methods to introduce optogenetic genes into zebrafish, and desirable apparatus for photostimulation and motion analysis with an example from our studies.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 219.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 279.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 279.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Abbreviations

CiD neuron:

Circumferential ipsilateral descending neuron

CoPA neuron:

Commissural primary ascending neuron

DLF:

Dorsal longitudinal fascicule

dpf:

Days postfertilization

IC neuron:

Ipsilateral projecting neuron

PTU:

Phenylthiourea

RB neuron:

Rohon-Beard neuron

RS neuron:

Reticulospinal neuron

References

  • Gleason MR, Higashijima S, Dallman J, Liu K, Mandel G, Fetcho JR (2003) Translocation of CaM kinase II to synaptic sites in vivo. Nat Neurosci 6:217–218

    Article  CAS  Google Scholar 

  • Hwang WY, Fu Y, Reyon D, Maeder ML, Tsai SQ, Sander JD, Peterson RT, Yeh JR, Joung JK (2013) Efficient genome editing in zebrafish using a CRISPR-Cas system. Nat Biotechnol 31:227–229

    Article  CAS  Google Scholar 

  • Kawakami K (2007) Tol2: a versatile gene transfer vector in vertebrates. Genome Biol 8(Suppl 1):S7

    Article  Google Scholar 

  • Kimura Y, Hisano Y, Kawahara A, Higashijima S (2014) Efficient generation of knock-in transgenic zebrafish carrying reporter/driver genes by CRISPR/Cas9-mediated genome engineering. Sci Rep 4:6545

    Article  CAS  Google Scholar 

  • Li M, Zhao L, Page-McCaw PS, Chen W (2016) Zebrafish genome engineering using the CRISPR-Cas9 system. Trends Genet 32:815–827

    Article  Google Scholar 

  • Pietri T, Manalo E, Ryan J, Saint-Amant L, Washbourne P (2009) Glutamate drives the touch response through a rostral loop in the spinal cord of zebrafish embryos. Dev Neurobiol 69:780–795

    Article  CAS  Google Scholar 

  • Umeda K, Ishizuka T, Yawo H, Shoji W (2016) Position- and quantity-dependent responses in zebrafish turning behavior. Sci Rep 6:27888

    Article  CAS  Google Scholar 

  • Villefranc JA, Amigo J, Lawson ND (2007) Gateway compatible vectors for analysis of gene function in the zebrafish. Dev Dyn 236:3077–3087

    Article  CAS  Google Scholar 

  • White RM, Sessa A, Burke C, Bowman T, LeBlanc J, Ceol C, Bourque C, Dovey M, Goessling W, Burns CE, Zon LI (2008) Transparent adult zebrafish as a tool for in vivo transplantation analysis. Cell Stem Cell 2:183–189

    Article  CAS  Google Scholar 

Download references

Acknowledgments

The studies described here were supported by FRIS promoted research grant. I thank to the National Bioresource Project (NBRP), Japan for supplying a transgenic zebrafish strain in the work.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Wataru Shoji .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 Springer Nature Singapore Pte Ltd.

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Shoji, W. (2021). Optogenetics on Zebrafish. In: Yawo, H., Kandori, H., Koizumi, A., Kageyama, R. (eds) Optogenetics. Advances in Experimental Medicine and Biology, vol 1293. Springer, Singapore. https://doi.org/10.1007/978-981-15-8763-4_21

Download citation

Publish with us

Policies and ethics