Prevention and Control Strategies for SARS-CoV-2 Infection
The population of 168 countries all over the world is struggling with the outbreak of COVID-19. The outbreak is declared as pandemic and public health emergency of international concern declared by WHO. SARS-CoV-2 responsible for the present health emergency exhibited close resemblance with SARS-CoV. Both the viruses are zoonotic and belong to a large family of viruses Coronaviridae. The complete virus particle is made up of four major structural proteins, namely spikes (S), nucleocapsid (N), membrane (M), and envelope (E) encoded by virus genome. The S protein of virus shows similarity to S protein of SARS-CoV. COVID-19 spreads from person to person, and this makes it more vulnerable for causing infection. Several efforts are taken to find prevention strategies for COVID-19. Researchers across the globe are working to find effective vaccination for SARS-CoV-2. There is no vaccine or medication available till date for COVID-19. Preventive measures such as social distancing, awareness, maintenance of hygiene, isolation, and movement restrictions can help in control of COVID-19 spread. Proper sanitization and cleaned and sanitized public transport can be effective in inhibiting the spread of the virus. In the present situation of medical emergency, cooperation and support by following advices from the WHO and government only facilitate everyone to come over.
KeywordsCoronavirus COVID-19 Vaccine SARS-CoV-2
- BW CoV
Beluga Whale CoV
Infectious bronchitis virus
Middle East respiratory syndrome
Porcine epidemic diarrhoea virus
Swine acute diarrhoea syndrome-CoV
Severe acute respiratory syndrome
Transmissible gastroenteritis virus
World Health Organization
The SARS-COV 2 or COVID-19 is emerged as global pandemic declared by the WHO with 184,976 reported cases across 159 countries until March 18, 2020 and accounts for 7529 deaths globally (WHO). The severity of COVID-19 can be easily understood by the exponentially increasing cases worldwide. The virus affects respiratory system like other influenza viruses and appears as a major threat throughout the world after 1918 Spanish flu (H1N1) outbreak. COVID-19 is one of the highly infectious diseases with the ability to affect a large population globally and can cause severe impact on socioeconomic stability of the world. The emergence of SARS-CoV traces back to year 2003 from China, and again another mutant emerged in 2012 known as MERS from Saudi Arabia. All the three highly infectious strains of CoV are found to be zoonotic and transmitted from animals to people.
Coronaviruses causing infection in humans
Common cold and flu
Flu, severe respiratory syndrome, pneumonia
Fever, cough, severe acute respiratory syndrome, bronchitis
Severe acute respiratory syndrome, fever, dry cough, kidney failure, high transmission between person to person
The emergence of COVID-19 has drawn very much attention of researchers and health professionals because of its high infection potential and novel structure. Researchers found the stability of SARS-CoV-2 on various surfaces and compared the same with SARS-CoV-1. The experimental data under varied circumstances on different surfaces are found to be similar for both the strains (van Doremalen et al. 2020). The experimental observation shows that alterations in the epidemiologic characteristics of both the viruses may arise due to other reasons. The high viral concentration in the upper respiratory tract in the patient and the potential of COVID-19-infected individual to carry and spread the virus while being in asymptomatic condition are some probable reasons for high infection rate, making its control challenging (Bai et al. 2020; Zou et al. 2020).
COVID-19 is a single-stranded (ss) RNA virus consisting of 26–36 kb positive sense RNA genome. The complete virus particle is made up of four major structural proteins, namely spikes (S), nucleocapsid (N), membrane (M), and envelope (E) encoded by virus genome (Forni et al. 2017). The size of SARS-CoV-2-encoded proteins shows similarity to bat SARS-CoV. The important difference is longer length and structure of S protein of SARS-CoV-2 in comparison to SARS-CoV and bat SARS-CoV observed by researchers. These S proteins are very crucial for receptor binding, membrane fusion, internalization of the SARS-CoV-2, tissue tropism, and host array. This S protein may be utilized as vital target for vaccine development (Menachery et al. 2016; Ji et al. 2020; Kumar et al. 2020).
Extensive efforts are already taken to control COVID-19 spread and for the development of effective vaccines around the world. Scientists are working round the clock individually and in collaboration to get some effective solution for the severe pandemic occurred by COVID-19. The COVID-19 outbreak can be reduced and controlled only by maintaining self-hygiene, social distancing, and strong immunity until any vaccine or effective medication is found. The present chapter provides an insight into the prevention and control strategies for COVID-19 including vaccine development and control measures.
11.2 SARS-CoV-2 Vaccine Development
COVID-19 contains the largest RNA genome and has spike proteins which play very important role in host–virus interaction and infection. After entering into host cells, the viral genome translates into two large precursors, poly-proteins known as PP1a and PP1ab. These precursors further processed by ORF1a-encoded viral proteinases, PL pro (papain-like proteinases) and 3CL pro (3C-like proteinases) into 16 mature non-structural proteins, namely nsp1 to nsp16. These nsps perform several important functions in viral RNA replication and transcription, RNA polymerase, RNA-processing enzymes such as poly (U)-specific endoribonuclease, protease, helicase, 3′–5′ exoribonuclease, ribose 2′-O methyltransferase, adenosine diphosphate-ribose-1″-phosphatase, and cyclic nucleotide phosphodiesterase (Narayanan et al. 2015). Additionally, these nsps have a major role in viral RNA replication and transcription. Due to the absence of proofreading mechanism during RNA recombination process in pre-existed coronaviruses strains, it may account to be responsible for the evolution of SARS-CoV-2. The S gene-encoding spike glycoproteins have the maximum recombination frequency (Ji et al. 2020; Kumar et al. 2020). Out of the three major proteins forming viral envelope, S and M are glycol proteins and the E is non-glycosylated protein. M and E proteins are essential for virus assembly, morphogenesis, and budding. The M protein comprises short N terminal glycosylated ectodomain with a long C terminal domain and three membrane domains. On the other hand, S glycoprotein is a type 1 fusion viral protein which includes two heptad repeat regions HR-N and HR-C and forms protein ectodomain-surrounded coiled structure. Additionally, the S protein cleaves into two subunits S1 and S2 and facilitates receptor binding (at domain 270–510) and membrane fusion, respectively (Tripet et al. 2004; Yuen et al. 2007; Fehr and Perlman 2015; Narayanan et al. 2015; Kumar et al. 2020; Wan et al. 2005). Considering the importance of S protein in attachment with host cell and variation in sequence of S protein from SARS-CoV-1, S protein may be considered potential candidate for vaccine development. Systematic assessment identified that 380 amino acid substitutions between SARS-CoV-1, SARS like bat CoV, and SARS-CoV-2 may be responsible for functional and pathogenic divergence of SARS-CoV-2 (Wu et al. 2020).
Vaccine under development to combat SARS-CoV-2
Type of vaccine
Current stage (clinical/regulatory)
Moderna Inc. and NIAID
Clinical trial phase 1
Live attenuated virus
Deoptimized live attenuated virus
Pfizer and BioNTech
Recombinant protein subunit
University of Georgia
Recombinant protein subunit
Recombinant protein subunit
University of Queensland
Recombinant protein subunit
Live attenuated virus
Johnson & Johnson
Live attenuated virus
Full-length S trimers/nanoparticle + matrix M
S protein (baculovirus production)
Replicating viral vector
Replicating viral vector
Tonix Pharma/Southern Research
S protein clamp
Baylor, New York Blood Center, Fudan University
Eli Lilly with AbCelerra
The above given set of data is few of ongoing search for potential vaccine. Vaccine development is one of the typical processes and requires lot of efforts and time. There are several vaccines under development for SARS-CoV-1 and MERS-CoV, and researches are still going on at various stages of clinical trials. The available advanced technology for virus genome sequencing and global emergency of pandemic expedite the process to develop vaccine at earliest. The potential vaccine may take more than a year to come on the market after getting all approvals. As once the researchers develop a vaccine, it must get approved from various agencies like FDA after which the vaccine is sent to three phases of clinical trial. In phase 1, a small group of people are selected to evaluate the safety and immune response for vaccine. After successful trial in phase 1, the vaccine is tested for phase 2 clinical trial on approximately few hundred people to analyse the dosage. In phase 3, the effectiveness and safety evaluation of the vaccine will be evaluated on a large population. Once the vaccine passes all the three phases, it successfully gets approval from the FDA and is released for use to combat against the pathogen.
11.3 Types of Coronavirus Vaccines
Whole virus vaccine/live attenuated vaccine
Small subunit-based vaccine
Nucleic acid-based vaccine
Type of vaccine
INO-4700 DNA plasmid vaccine expresses S protein
Clinical trial phase 2
GeneOne Life Science and Inovio
Clinical trial phase 1
Shen et al. (2019)
Vector (adeno virus)
ChAdOx1 S protein antigen
University of Oxford
Clinical trial phase 1
Alharbi et al. (2017)
University of Pittsburgh
Gao et al. (2003)
UV-inactivated purified SARS-CoV
National Institute of Infectious Diseases Japan
Takasuka et al. (2004)
The research reported by various individual groups shows that CoV S subunit protein provides complete protection than SARS-CoV live attenuated vaccines, full-length S protein, and DNA-based S protein vaccines (Buchholz et al. 2004). The S protein gene of coronavirus is a highly preferable target of antigenicity as exhibited by the reactivity with convalescent SARS patient sera. It shows precise binding to soluble ACE-2 receptor. Additionally, it promotes antibody-dependent viral access in Raji B cells of human refractory B Cells and provokes defense against a impute infection in an animal model (Liu et al. 2020).
11.4 Efficacy and Effectiveness of Coronavirus Vaccines
The efficacy and effectiveness of vaccine are the most important criteria for the development of vaccine. The efficacy of a vaccine is defined as “The reduction percentage of disease in vaccinated or recipients’ group in comparison to unvaccinated groups under optimal condition.” Whereas, the effectiveness of a vaccine is defined as “The percentage control achieved for particular disease in vaccinated group compared to unvaccinated group at real world in natural environment.” The efficacy of vaccine is studied when the vaccine is in clinical trial, whereas the effectiveness is studied after the release of vaccine commercially or to mass after all approvals.
The efficacy of different types of coronavirus vaccines is studied for their potential application in the prevention of the disease. Various types of coronavirus vaccines are under research like inactivated coronavirus, live attenuated coronavirus, S-protein-based, vectored vaccines, DNA vaccines, and combination vaccines. Vaccines for combating several animal-based CoVs have been developed and demonstrated to be efficient in averting viral contagion. Vaccines for human CoVs, especially deadly SARS-CoV-1, MERS-CoV, and the present pandemic COVID-19, are under development in various levels of preclinical, subclinical, and clinical trials. The study of virus-like particle vaccine in mice and whole virus vaccine in non-human primates and ferrets exhibits immune response against CoV infection, but later on vaccinated animals unveiled immunopathological lung disease (Tseng et al. 2012). Another study in canine CoV vaccine exhibited that the vaccination with inactivated CoV can expressively reduce the viral replication followed with the reduction in occurrence of clinical symptoms and disease due to virulent CoV infection (Fulker et al. 1995). In a study carried out on rhesus monkey with SARS-CoV, inactivated vaccine exhibited effective concomitant humoral and mucosal immunity against SARS-CoV infection. The rhesus monkey was inoculated with a varied dose (0.5, 5, 50, and 5000 μg) of vaccine and provided with booster dose after a week. Afterwards the animals were exposed to NS-1 strain of SARS-CoV, the vaccinated monkeys had not shown any systematic side effects neither any clinical symptoms. The vaccine in study shows promising results on monkeys and may be further tested under clinical trials on humans (Zhou et al. 2005).
Various therapeutic efforts were adopted for the CoV vaccine globally; however, no solution in form of promising treatment or vaccination is identified till date. Progressive efforts on developed animal models and under clinical trials are ongoing to find an effective vaccine that is underway. As discussed in the above sections, targeting S glycoproteins of the virus and its subunits responsible for host interaction may be effective target for CoV vaccine for humans. As per research conducted on various CoV genetic structure, the S protein genetic make-up is found to be similar in SARS-CoV, bat SARS-CoV, and SARS-CoV-2. Previously conducted studies on SARS-CoV and MERS-CoV vaccine development based on S glycoproteins of virus can provide insight into effective and efficient vaccine development against deadly strains of corona.
11.5 Control Strategies of Coronavirus Infection
The viral diseases are emerging as serious threat to public health in the past 20 years. Several viral epidemics identified as potential health hazard such as SARS-CoV, H1N1, H5N1 influenza, MERS-CoV, Zika, Ebola, and now COVID-19 erupt as pandemic affecting approximately 168 countries around the globe. The outbreak of SARS-CoV-2 is identified as public health emergency of international concern declared by WHO. The reported potential of human-to-human transmission of the virus makes it a more vulnerable threat for a large population. COVID-19 is a serious global health issue, and scientists across the world are working tirelessly to find its prevention and therapeutic strategies. As of now, no medication or vaccine is available for COVID-19. The symptomatic treatment in mild infections and oxygen therapy in critical cases are found to be effective. There are some reports providing positive response from the use of individual and combination of drugs like ritonavir, chloroquine, lopinavir, BCX-4430 (salt form of galidesivir), nitazoxanide, and ribavirin (Liu et al. 2020). But no fundamental or approved evidence is available for the use of these drugs till date from any international organization like the WHO or FDA.
Isolation of the affected person and individual travelling from affected countries or potential carriers. As some of the studies suggested that COVID-19 can be spread via asymptomatic carriers too, and it is a dangerous situation.
Imposing travel restrictions from and to the affected countries.
Blocking transmission by maintaining high-level hygienic condition in home and surroundings.
Avoid social gathering, as it inhibits its geometrical progression and flatten the curve.
Spreading awareness among public.
Use of masks and protective clothes by infected, elderly, and immunocompromised individuals to avoid spread of infection or from protecting self from COVID-19.
Maintenance of good immunity, consumption of nutrient diet, consumption of vitamins especially C and E with yoga and exercises help in fighting with COVID-19 infection.
Social distancing, as the virus can transmit from person to person, i.e., maintenance of social distance, is highly recommended.
SARS-CoV-2 is a novel virus, and very less is known about the virus. Precaution is better than cure perfectly fits for COVID-19.
“Natural calamities bring people closer, viral calamities keep people away.”
- As per WHO, 209,839 people are affected by COVID-19 until March 20, 2020.
COVID-19 is accountable for 8778 death and is present in 168 countries worldwide.
- Several studies are going on for exploring efficient medication and vaccine for COVID-19.
S-glycoprotein-based and mRNA-based vaccines show prominent response.
- SARS-CoV-2 shows similarity to SARS-CoV and bat-CoV.
The similarity in genome structure especially in S protein can be utilized for vaccine development and alternate medications which are effective on SARS-CoV.
- Precaution is only cure is true in the case of COVID-19.
Maintenance of social distancing, hygiene, and isolation.
Social awareness by government, media, NGOs, and responsible citizens.
Isolation of infected, suspected, and possible asymptomatic carriers.
Total lock down in highly affected places.
Proper maintenance of clean and sanitized environment.
- COVID-19 is a novel virus, and proper precautions is the only cure.
Support to government and responsible agencies by following advisory and guidelines.
Follow all the instructions and guidelines released by the WHO.
COVID-19 or SARS-CoV-2 is a novel virus having close genetic resemblance with SARS-CoV and bat-CoV. The virus is highly infectious and can transfer from person to person. As predicted previously by various researchers worldwide, COVID-19 emerged as pandemic. The present situation clearly calls for the fast and efficient availability of COVID-19 vaccines and therapeutics. Worldwide scientists already are working tirelessly for efficient and effective solution of COVID-19 pandemic; meanwhile, it is moral and social obligation of each individual on the planet to follow the guidelines and advisory from the government, the WHO, and other responsible agencies. Extended support and cooperation from public can only help to control the spread of COVID-19 further.
11.7 Future Perspective
An in-depth study to understand SARS-CoV-2 needs to be done.
Development of efficient vaccines and therapeutics/antiviral drugs needs to be carried out at the earliest.
Fast, cost-effective, and accurate diagnostic kits need to be developed.
The virus exhibits strong opportunity to study viral mutation pattern and their fast emergence as novel viral particle.
Nanomaterial-based drug delivery and diagnostics need to be explored for efficient and effective delivery and diagnostics.
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