Skip to main content

Protein-Protein Interfaces and Diseases

  • Chapter
  • First Online:
Protein-Protein and Domain-Domain Interactions

Abstract

A number of protein-protein complexes are associated with disease progression and are considered as targets for drug and vaccine development. Therefore, it is important to understand protein-protein interfaces in these disease-linked complexes. We illustrate and discuss this phenomenon using a hexameric (six subunits) cholera toxin (CT) and a HIV-1/ENV GP160 (GP120/GP40) trimer (three subunits) spike protein complex. Analysis of subunit-subunit interfaces in these complexes play an important role in the design, development, and production of a stable yet a viable vaccine.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Shamini G, Ravichandran M, Sinnott JT, Somboonwit C, Sidhu HS, Shapshak P, Kangueane P. Structural inferences for cholera toxin mutations in vibrio cholerae. Bioinformation. 2011;6(1):1–9.

    Article  PubMed  PubMed Central  Google Scholar 

  2. Sowmya G, Shamini G, Anita S, Sakharkar M, Mathura V, Rodriguez H, Levine AJ, Singer E, Commins D, Somboonwit C, Sinnott JT, Sidhu HS, Rajaseger G, Pushparaj PN, Kangueane P, Shapshak P. HIV-1 envelope accessible surface and polarity: clade, blood, and brain. Bioinformation. 2011;6(2):48–56.

    Article  PubMed  PubMed Central  Google Scholar 

  3. Dassault Systemes BIOVIA, BIOVIA Discovery Studio Visualizer, v16.1.0.15350, San Diego: Dassault Systemes, 2015 [cited: 2017 Mar 20]. Available from: http://accelrys.com/products/collaborative-science/biovia-discovery-studio/visualization-download.php

  4. Tsodikov OV, Record MT Jr, Sergeev YV. Novel computer program for fast exact calculation of accessible and molecular surface areas and average surface curvature. J Comp Chem. 2002;23:600–9.

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Exercises

Exercises

  1. 1.

    Illustrate the structure of a functional cholera toxin.

  2. 2.

    How many subunits constitute a cholera toxin?

  3. 3.

    Illustrate the HIV-1 spike protein using a neat diagram.

  4. 4.

    How many subunits constitute HIV-1/ENV GP160 trimer?

  5. 5.

    Discuss the issues in the development of an effective cholera vaccine.

  6. 6.

    Discuss the issues in the development of an effective HIV-1/AIDS vaccine.

  7. 7.

    Illustrate the CTB and CTA interface in a cholera toxin.

  8. 8.

    Illustrate the CTB interfaces in a cholera toxin.

  9. 9.

    Illustrate the GP120/GP40 interface in the HIV-1/ENV protein.

  10. 10.

    Discuss HIV-1/ENV GP160 trimer spike structure.

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Nature Singapore Pte Ltd.

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Kangueane, P., Nilofer, C. (2018). Protein-Protein Interfaces and Diseases. In: Protein-Protein and Domain-Domain Interactions. Springer, Singapore. https://doi.org/10.1007/978-981-10-7347-2_16

Download citation

Publish with us

Policies and ethics