Skip to main content

Preliminary Structural Studies of Photosystem I

  • Conference paper
  • 166 Accesses

Part of the book series: The Jerusalem Symposia on Quantum Chemistry and Biochemistry ((JSQC,volume 25))

Abstract

Photosystem I core complex (CCI) of the thermophilic cyanobacterium Mastigocladus laminosus has been purified and characterized in two oligomers; a monomeric form and a trimeric form. The purified preparations of both the monomer and the trimer were used for crystallization and preliminary crystallographic analysis. Both preparations produced three dimensional single crystals of several crystal habits in various crystallization conditions. An examination of the crystals in comparison to the related pre-crystallization preparations demonstrated that both forms of the CCI complex are not altered by the crystallization process. Two of the monomeric crystal habits showed X-ray diffraction suitable for crystallographic analysis. The “hexagonal plate” crystals have an hexagonal unit cell with dimensions of 192×192×163 Å and diffract X-ray to about 5.5 Å resolution. The “boat” crystals have an hexagonal unit cell with dimensions of 221×221×149 Å and diffract X-ray to about 6Å resolution. Both of these hexagonal crystal forms contain six CCI monomers, in a probably similar crystal packing. The differences in cell dimensions could be a result of a different content of solvent and detergent in the crystal. Assuming that in both forms the c axis is parallel to the transmembranal molecular axis, and that there are two layers of monomers along this crystallographic axis, it is estimated that the upper limit thickness of the CCI monomeric complex is 79 Å. A preliminary model of ferredoxin-like subunit (PsaC or VII) of CCI was also constructed. The initial model was built from segments of the backbone structure of two related ferredoxins of known structure, and the amino acid sequence of subunit VII of the spinach CCI. The structure of the initial model was then refined with conventional molecular mechanics techniques. The energy minimization converged to an optimized structure which can be used as a working model for biologically relevant questions.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   259.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   329.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   329.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Bryant, D.A. (1992) ‘Molecular biology of photosystem’, In “Topics in Photosynthesis” eds. J. Barber (Elsevier Science Publisher, The Nederland) Vol. 11, 501–549.

    Google Scholar 

  2. Koike, H., Ikeuchi, M., Hiyama, T. and Inoue, Y. (1989) ‘Identification of photosystem I components from the cyanobacterum Synechococcus vulcannus by n-terminal sequencing.’, FEBS Lett., 253, 257–263.

    Article  PubMed  CAS  Google Scholar 

  3. Scheller, H.V. and Moller, B.L. (1990) ‘Photosystem I Polypeptides’, Physiologia Plantarum, 78, 484–494.

    Article  CAS  Google Scholar 

  4. Chitnis, P.R. and Nelson, N. (1991) ‘Photosystem I’, In: “Molecular Biology of Plastids” eds: Bogorad L. and Vasil I.K. (Academic Press, New York), 177–224.

    Google Scholar 

  5. Nechushtai, R., Muster, P., Binder, A., Liveanu, V. and Nelson, N. (1983) ‘Photosystem I reaction center from the thermophilic cyanobacterium Mastigocladus laminosus’, Proc. Natl. Acad. Sci. USA, 80, 1179–1183.

    Article  PubMed  CAS  Google Scholar 

  6. Deisenhofer, J., Epp, O., Miki, K., Huber, R. and Michel, H. (1984) ‘X-ray structure analysis of a membrane protein complex. Electron density map at 3 A resolution and a model of the chromophores of the photosynthetic reaction center from Rhodopseudomonas viridis.’, J. Mol. Biol., 180, 385–398.

    Article  PubMed  CAS  Google Scholar 

  7. Deisenhofer, J., Epp, O., Mild, K., Huber, R. and Michel, H. (1985) ‘Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3 A resolution’, Nature, 318, 618–624.

    Article  PubMed  CAS  Google Scholar 

  8. Allen, J.P., Feher, G., Yeates, T.O., Rees, D.C., Deisenhofer, J., Michel, H. and Huber, R. (1986) ‘Structural homology of reaction centers from Rhodopseudomonas sphaeroides and Rhodopseudomonas viridis as determined by x-ray diffraction’, Proc. Natl. Acad. Sci. USA, 83, 8589–8593.

    Article  PubMed  CAS  Google Scholar 

  9. Allen, J.P., Feher, G., Yeates, T.O., Komiya, H. and Rees, D.C. (1987) ‘Structure of the reaction center from Rhodobacter sphaeroides R-26: the cofactors.’, Proc. Natl. Acad. Sci. USA, 84, 5730–5734.

    Article  PubMed  CAS  Google Scholar 

  10. Almog, O., Shoham, G., Michaeli, D. and Nechushtai, R. (1991) ‘Monomeric and Trimeric Forms of Photosystem I Reaction Center of Mastigocladus Laminosus: Crystalization and Preliminary Characterization’, Proc. Natl. Acad. Sci. USA, 88, 5312–5316.

    Article  PubMed  CAS  Google Scholar 

  11. Ford, R.C. (1987) ‘Investigation of highly stable photosystem I chlorophyll-protein complexes from the thermophilic cyanobacterium Phormidium laminosum’, Biochim. Biophys. Acta, 893, 115–125.

    Article  CAS  Google Scholar 

  12. Ford, R.C. and Holzenburg, A. (1988) ‘Investigation of the structure of trimeric and monomeric photosystem I reaction centre complexes’, EMBO J., 7, 2287–2293.

    PubMed  CAS  Google Scholar 

  13. Boekema, E.J., Dekker, J.P., Van Heel, M.G., Rogner, M., Saenger, W., Witt, I. and Witt, H.T. (1987) ‘Evidence for a trimeric organization of the photosystem I complex from the thermophilic cyanobacterium Synechococcus sp.’, FEBS Lett., 217, 283–286.

    Article  CAS  Google Scholar 

  14. Boekema, E.J., Dekker, J.P., Rogner, M., Witt, I., Witt, H.T. and Heel, M.V. (1989) ‘Refined analysis of the trimeric structure of the isolated Photosystem I complex from the thermophilic cyanobacterium Synechococcus sp.’, Biochim. Biophys. Acta, 974, 81–87.

    Article  CAS  Google Scholar 

  15. Rogner, M., Nixon, P.J. and Diner, B. (1990) ‘Purification and Characterization of Photosystem I and Photosystem II Core Complexes from Wild-type and Phycocyanin-deficient Strains of the Cyanobacterium Synechocystis PCC 6803’, J. Biol. Chem., 265, 6189–6196.

    PubMed  CAS  Google Scholar 

  16. Rogner, M., Muhlenhoff, U., Boekema, E.J. and Witt, H.T. (1990) ‘Mono-, Di-and Trimeric PSI Reaction Center Complexes Isolated from the Thermophilic Cyanobacterium Synechococcus sp.: Size, Shape and Activity’, Biochim. Biophys. Acta, 1015, 415–424.

    Article  Google Scholar 

  17. Takahashi, Y., Koike, H. and Katoh, S. (1982) ‘Multiple forms of chlorophyll-protein complexes from a thermophilic cyanobacterium Synechococcus sp.’, Arch. Biochem. Biophys., 219, 209–218.

    Article  PubMed  CAS  Google Scholar 

  18. Michel, H. and Oesterhelt, D. (1980) ‘Three-dimensional crystals of membrane proteins: bacteriorhodopsin’, Proc. Natl. Acad. Sci. USA, 77, 1283–1285.

    Article  PubMed  CAS  Google Scholar 

  19. Michel, H. (1982)’3-Dimensional crystals of a membrane protein complex. The photosynthetic reaction center from Rhodopseudomonas viridis’, J. Mol. Biol., 158, 567–572.

    Article  PubMed  CAS  Google Scholar 

  20. Michel, H. (1983) ‘Crystallization of membrane proteins’, Trends Biochem. Sci., 8, 56–59.

    Article  CAS  Google Scholar 

  21. Garavito, R.M. and Rosenbusch, J.P. (1980) ‘Three-dimensional crystals of an integral membrane protein’, J. Cell Biol., 86, 327–329.

    Article  PubMed  CAS  Google Scholar 

  22. Garavito, R.M. and Rosenbusch, J.P. (1986) ‘Isolation and crystallization of bacterial porin’, Meth. Enzymol., 125, 309–328.

    Article  PubMed  CAS  Google Scholar 

  23. Kuhlbrandt, W. (1988) ‘Three-dimensional crystallization of membrane proteins’, Quart. Rev. Biophys., 21, 429–477.

    Article  CAS  Google Scholar 

  24. Michel, H. (1991) ‘Crystallization of membranal proteins’ eds: Michel H. (CRC Press), 73–89.

    Google Scholar 

  25. Witt, I., Witt, H.T., Gerken, S., Saenger, W., Dekker, J.P. and Rogner, M. (1987) ‘Crystallization of reaction center I of photosynthesis, low-concentration crystallization of photoactive protein complex from the cyanobacterium Synechoccus sp.’, FEBS Lett., 221, 260–264.

    Article  CAS  Google Scholar 

  26. Witt, I., Witt, H.T., Fiore, D.D., Rogner, M., Hinrichs, W., Saenger, W., Granzin, J., Betzel, C. and Dauter, Z. (1988) ‘X-Ray Characterization of Single Crystals of the Reaction Center I of Water Splitting Photosynthesis’, Ber. Bunsenges. Phys. Chem., 92, 1503–1506.

    CAS  Google Scholar 

  27. Ford, R.C., Picot, D. and Garavito, R.M. (1987) ‘Crystallization of the photosystem I reaction center’, EMBO J., 6, 1581–1586.

    PubMed  CAS  Google Scholar 

  28. Ford, R.C., Pauptit, R.A. and Holzenburg, A. (1988) ‘Structural studies on improved crystals of the photosystem I reaction center from Phormidium laminosum’, FEBS Lett., 238, 385–389.

    Article  CAS  Google Scholar 

  29. Shoham, G., Michaeli, D. and Nechushtai, R. (1989) ‘Photosystem I reaction center of Mastigoclaudus laminosus: Structure and functional features’, The VIIIth International Congress on Photosynthesis (M. Baltesevsky, Ed.), II, 7.555–7.562.

    Google Scholar 

  30. Allen, J.P. and Feher, G. (1984) ‘Crystallization of reaction center from Rhodopseudomonas sphaeroides: Preliminary characterization’, Proc. Natl. Acad. Sci. USA, 81, 4795–4799.

    Article  PubMed  CAS  Google Scholar 

  31. Garavito, R.M., Jenkins, J., Jansonius, J.N., Karlson, R. and Rosenbush, J.P. (1983) ‘X-ray diffraction Anylysis of Porin an Integral membrane’ J. Mol. Biol., 164, 313–325.

    Article  PubMed  CAS  Google Scholar 

  32. Mathews, B.W. (1968) Solvent content of protein crystals’J. Mol. Biol., 33, 491–497.

    Article  Google Scholar 

  33. Boekema, E.J., Wynn, R.M. and Malkin, R. (1990) ‘The structure of spinach Photosystem I studied by electron microscopy’, Biochim. Biophys. Acta, 1017, 4956.

    Google Scholar 

  34. Timmins, P.A., Leonhard, M., Weltzien, H.U., Wacker, T. and Welte, W. (1988) FEBS Lett., 238, 361–368.

    Article  CAS  Google Scholar 

  35. Fukuyama, K., Tsukihara, T. and Katsube, Y. (1988) ‘Tertiary Structure of Bacillus thermoproteolyticus [4Fe-45] ferredoxin’, J. Mol. Biol., 199, 183.

    Article  PubMed  CAS  Google Scholar 

  36. Adman, E.T., Sieker, L.C. and Jensen, L.H. (1976) ‘Structure of Peptococcus Aerogenes Ferredoxin’, J. Biol. Chem., 251, 3801.

    PubMed  CAS  Google Scholar 

  37. Novotny, J., Bruccoleri, R. and Karplus, M. (1984) ’ Misfolded proteins’ J. Mol. Biol., 177, 787–818.

    Article  PubMed  CAS  Google Scholar 

  38. Read, R.J., Brayer, G.D., Jurasek, L. and James, M.N.G. (1984) ‘Critical evaluation of comparative model building of Streptomyces Griseus’, Biochem., 23, 6570–6575.

    Article  CAS  Google Scholar 

  39. Tsukihara, T., Fukuyama, K., Nakamura, M., Katsube, Y., Tanaka, N., Kakudo, M., Wada, K., Hase, T. and Matsubara, H. (1981) ‘X-ray analysis of a [2Fe-2S] ferredoxin from Spirulina Platensis’, J. Biochem., 90, 1763.

    CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1992 Springer Science+Business Media Dordrecht

About this paper

Cite this paper

Almog, O., Greenblatt, H.M., Tucker, P., Steppuhn, J., Shoham, G. (1992). Preliminary Structural Studies of Photosystem I. In: Pullman, A., Jortner, J., Pullman, B. (eds) Membrane Proteins: Structures, Interactions and Models. The Jerusalem Symposia on Quantum Chemistry and Biochemistry, vol 25. Springer, Dordrecht. https://doi.org/10.1007/978-94-011-2718-9_34

Download citation

  • DOI: https://doi.org/10.1007/978-94-011-2718-9_34

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-94-010-5205-4

  • Online ISBN: 978-94-011-2718-9

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics