Abstract
The detection of non-amplified DNA sequences plays a crucial role in the rapid diagnosis of genetic-related diseases especially for early stage treatment. Among the various biosensors that have been used for DNA detection, electrochemical sensors show great promise because they present efficient signal transduction and are capable of precise DNA recognition at a relatively low cost in addition to the broad range of designs with interest to be applied in different kinds of samples. Advancements in micro- and nanotechnologies, specifically fabrication techniques and new nanomaterials, have enabled for the development of highly sensitive, highly specific electrochemical sensors making them attractive for the detection of small sequence variations. Furthermore, the integration of sensors with sample preparation and fluidic processes enables for rapid, multiplexed electrochemical DNA detection essential for point of care clinical diagnostics.
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References
Zarbin, M.A., Montemagno, C., Leary, J.F., Ritch, R.: Nanomedicine in ophthalmology: the new frontier. Am. J. Ophthalmol. 150, 144–162 (2010)
Wei, F., Lillehoj, P.B., Ho, C.: DNA diagnostics: nanotechnology-enhanced electrochemical detection of nucleic acids. Pediatr. Res. 67, 458–468 (2010)
Nie, S., Xing, Y., Kim, G.J., Simons, J.W.: Nanotechnology applications in cancer. Annu. Rev. Biomed. Eng. 9, 257–288 (2007)
Liepold, P., Wieder, H., Hillebrandt, H., Friebel, A., Hartwich, G.: DNA-arrays with electrical detection: a label-free low cost technology for routine use in life sciences and diagnostics. Bioelectrochemistry 67, 143–150 (2005)
Lucarelli, F., Capponcelli, S., Marrazza, G., Sangiorgi, L., Mascini, M.: Split hybridisation probes for electrochemical typing of single-nucleotide polymorphisms. Analyst 134, 52–59 (2009)
Pohlmann, C., Wang, Y.R., Humenik, M., Heidenreich, B., Gareis, M., Sprinzl, M.: Rapid, specific and sensitive electrochemical detection of foodborne bacteria. Biosens. Bioelectron. 24, 2766–2771 (2009)
Wakai, J., Takagi, A., Nakayama, M., Miya, T., Miyahara, T., Iwanaga, T., Takenaka, S., Ikeda, Y., Amano, M.: A novel method of identifying genetic mutations using an electrochemical DNA array. Nucleic Acids Res. 32, e141 (2004)
Zhang, J., Song, S.P., Zhang, L.Y., Wang, L.H., Wu, H.P., Pan, D., Fan, C.: Sequence specific detection of femtomolar DNA via a chronocoulometric DNA sensor (CDS): effects of nanoparticle-mediated amplification and nanoscale control of DNA assembly at electrodes. J. Am. Chem. Soc. 128, 8575–8580 (2006)
Lord, H., Kelley, S.O.: Nanomaterials for ultrasensitive electrochemical nucleic acids biosensing. J. Mater. Chem. 19, 3127–3134 (2009)
Radwan, S.H., Azzazy, H.M.: Gold nanoparticles for molecular diagnostics. Expert Rev. Mol. Diagn. 9, 511–524 (2009)
Wei, F., Liao, W., Xu, Z., Yang, Y., Wong, D.T., Ho, C.M.: Bio/abiotic interface constructed from nanoscale DNA dendrimer and conducting polymer for ultrasensitive biomolecular diagnosis. Small 5, 1784–1790 (2009)
Pandey, P., Datta, M., Malhotra, B.D.: Prospects of nanomaterials in biosensors. Anal. Lett. 41, 159–209 (2008)
Kerman, K., Morita, Y., Takamura, Y., Ozsoz, M., Tamiya, E.: Modification of Escherichia coli single-stranded DNA binding protein with gold nanoparticles for electrochemical detection of DNA hybridization. Anal. Chim. Acta 510, 169–174 (2004)
Liao, W.C., Ho, J.A.: Attomole DNA electrochemical sensor for the detection of Escherichia coli O157. Anal. Chem. 81, 2470–2476 (2009)
Ozsoz, M., Erdem, A., Kerman, K., Ozkan, D., Tugrul, B., Topcuoglu, N., Ekren, H., Taylan, M.: Electrochemical genosensor based on colloidal gold nanoparticles for the detection of Factor V Leiden mutation using disposable pencil graphite electrodes. Anal. Chem. 75, 2181–2187 (2003)
Castañeda, M.T., Merkoçi, A., Pumera, M., Alegret, S.: Electrochemical genosensors for biomedical applications based on gold nanoparticles. Biosens. Bioelectron. 22, 1961–1967 (2007)
Mao, X., Liu, G.D.: Nanomaterial based electrochemical DNA biosensors and bioassays. J. Biomed. Nanotechnol. 4, 419–431 (2008)
Wang, F., Hu, S.S.: Electrochemical sensors based on metal and semiconductor nanoparticles. Microchim. Acta 165, 1–22 (2009)
Xu, K., Huang, J.R., Ye, Z.Z., Ying, Y.B., Li, Y.B.: Recent development of nanomaterials used in DNA biosensors. Sensors 9, 5534–5557 (2009)
Pumera, M., Castañeda, M.T., Pividori, M.I., Merkoçi, A., Alegret, S., Eritja, R.: Magnetically trigged direct electrochemical detection of DNA hybridization using Au67 quantum Dot as electrical tracer. Langmuir 21, 9625–9629 (2005)
Wang, J., Xu, D., Kawde, A., Polsky, R.: Metal nanoparticle-based electrochemical stripping potentiometric detection of DNA hybridization. Anal. Chem. 73, 5576–5581 (2001)
Wang, J., Polsky, R., Xu, D.: Silver-enhanced colloidal gold electrochemical stripping detection of DNA hybridization. Langmuir 17, 5739–5741 (2001)
Wang, J., Xu, D., Polsky, R.: Magnetically-induced solid-state electrochemical detection of DNA hybridization. J. Am. Chem. Soc. 124, 4208–4209 (2002)
Park, S., Taton, T.A., Mirkin, C.A.: Array-based electrical detection of DNA with nanoparticle probes. Science 295, 1503–1506 (2002)
Wang, J., Liu, G., Merkoçi, A.: Electrochemical coding technology for simultaneous detection of multiple DNA targets. J. Am. Chem. Soc. 125, 3214–3215 (2003)
Zhu, N., Zhang, A., Hea, P., Fang, Y.: Cadmium sulfide nanocluster-based electrochemical stripping detection of DNA hybridization. Analyst 128, 260–264 (2003)
Wang, J., Liu, G., Polsky, R., Merkoçi, A.: Electrochemical stripping detection of DNA hybridization based on cadmium sulfide nanoparticle tags. Electrochem. Commun. 4, 722–726 (2002)
Marin, S., Merkoçi, A.: Direct electrochemical stripping detection of cystic-fibrosis-related DNA linked through cadmium sulfide quantum dots. Nanotechnology 20(1–6), 055101 (2009)
Fu, X.: Electrochemical measurement of DNA hybridization using nanosilver as label and horseradish peroxidase as enhancer. Bioprocess Biosyst. Eng. 31, 69–73 (2008)
Cai, H., Xu, Y., Zhu, N., He, P., Fang, Y.: An electrochemical DNA hybridization detection assay based on a silver nanoparticle label. Analyst 127, 803–808 (2002)
Wang, J., Liu, G., Merkoçi, A.: Particle-based detection of DNA hybridization using electrochemical stripping measurements of an iron tracer. Anal. Chim. Acta 482, 149–155 (2003)
Iijima, S.: Helical microtubules of graphitic carbon. Nature 354, 56–58 (1991)
Trojanowicz, M.: Analytical applications of carbon nanotubes: a review. Trac Trends Anal. Chem. 25, 480–489 (2006)
Tang, T., Peng, T.Z., Shi, Q.C.: Sequence determination of DNA pieces using carbon nanotube modified gold electrodes. Acta Chim. Sin. 63, 2042–2046 (2005)
Abdullin, T.I., Nikitina, I.I., Ishmukhametova, D., Budnikov, G.K., Konovalova, O.A., Salakhov, M.K.: Carbon nanotube-modified electrodes for electrochemical DNA-sensors. J. Anal. Chem. 62, 599–603 (2007)
Kerman, K., Morita, Y., Takamura, Y., Tamiya, E.: Escherichia coli single-strand binding protein-DNA interactions on carbon nanotube-modified electrodes from a label-free electrochemical hybridization sensor. Anal. Bioanal. Chem. 381, 1114–1121 (2005)
Erdem, A., Papakonstantinou, P., Murphy, H.: Direct DNA hybridization at disposable graphite electrodes modified with carbon nanotubes. Anal. Chem. 78, 6656–6659 (2006)
Katz, E., Willner, I.: Biomolecule-functionalized carbon nanotubes: applications in nanobioelectronics. Chem. Phys. Chem. 5, 1084–1104 (2004)
Zhang, R.Y., Wang, X.M., Chen, C.: Electrochemical biosensing platform using carbon nanotube activated glassy carbon electrode. Electroanalysis 19, 1623–1627 (2007)
Bollo, S., Ferreyra, N.F., Rivas, G.A.: Electrooxidation of DNA at glassy carbon electrodes modified with multiwall carbon nanotubes dispersed in chitosan. Electroanalysis 19, 833–840 (2007)
Wang, J., Liu, G., Jan, M.R., Zhu, Q.: Electrochemical detection of DNA hybridization based on carbon-nanotubes loaded with CdS tags. Electrochem. Commun. 5, 1000–1004 (2003)
Wang, J., Liu, G.D., Jan, M.R.: Ultrasensitive electrical biosensing of proteins and DNA: carbon nanotube derived amplification of the recognition and transduction events. J. Am. Chem. Soc. 126, 3010–3011 (2004)
Li, Y., Qi, H.L., Fang, F., Zhang, C.X.: Ultrasensitive electrogenerated chemiluminescence detection of DNA hybridization using carbon-nanotubes loaded with tris(2,2′-bipyridyl) ruthenium derivative tags. Talanta 72, 1704–1709 (2007)
Wang, X., Ozkan, C.S.: Multisegment nanowire sensors for the detection of DNA molecules. Nano Lett. 8, 398–404 (2008)
Lapierre-Devlin, M.A., Asher, C.L., Taft, B.J., Gasparac, R., Roberts, M.A., Kelley, S.O.: Amplified electrocatalysis at DNA-modified nanowires. Nano Lett. 5, 1051–1055 (2005)
Zhu, N., Chang, Z., Heb, P., Fang, Y.: Electrochemically fabricated polyaniline nanowire-modified electrode for voltammetric detection of DNA hybridization. Electrochim. Acta 51, 3758–3762 (2006)
Escosura-Muñiz, A., Maltez, M., Merkoçi, A.: Controlling the electrochemical deposition of silver onto gold nanoparticles: reducing interferences and increasing the sensitivity of magnetoimmuno assays. Biosens. Bioelectron. 24, 2475–2482 (2009)
Escosura-Muñiz, A., Ambrosi, A., Merkoçi, A.: Electrochemical analysis with nanoparticle-based biosystems. Trac Trends Anal. Chem. 27, 568–584 (2008)
Ambrosi, A., Castañeda, M.T., Killard, A.J., Smyth, M.R., Alegret, S., Merkoçi, A.: Double-codified gold nanolabels for enhanced immunoanalysis. Anal. Chem. 79, 5232–5240 (2007)
Escosura-Muñiz, A., Parolo, C., Merkoçi, A.: Immunosensing using nanoparticles. Mater. Today 13, 17–27 (2010)
Merkoçi, A. (ed.): Biosensing Using Nanomaterials. Wiley-Interscience, Hoboken (2009)
Maltez, M., Escosura-Muñiz, A., Merkoçi, A.: Electrochemical quantification of gold nanoparticles based on their catalytic properties toward hydrogen formation: application in magnetoimmunoassays. Electrochem. Commun. 12, 1501–1504 (2010)
Escosura-Muñiz, A., Merkoçi, A.: Label-free voltammetric immunosensor using a nanoporous membrane based platform. Electrochem. Commun. 12, 859–863 (2010)
Escosura-Muñiz, A., Merkoçi, A.: A nanochannel/nanoparticle-based filtering and sensing platform for direct detection of a cancer biomarker in blood. Small 7, 675–682 (2011)
Acknowledgments
We acknowledge funding from MICINN (Madrid) for the projects MAT2008-03079 and MAT2011-25870.
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Marín, S., Merkoçi, A. (2012). Electrochemical Detection of DNA Using Nanomaterials Based Sensors. In: Spoto, G., Corradini, R. (eds) Detection of Non-Amplified Genomic DNA. Soft and Biological Matter. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-1226-3_7
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DOI: https://doi.org/10.1007/978-94-007-1226-3_7
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