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Boundary Questions Between Ontology and Biology

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Abstract

This chapter deals with some problems linking biology and ontology. After a general survey of the most prominent ontological questions lying behind biology, the study case of biological boundaries is addressed. The scrutiny of the relevant literature shows that biologists speak of various types of boundary: perceptual, compositional, epithelial, cellular and sensu lato processual boundaries; all of them appear to be, in a way or another, flawed by some theoretical inconsistencies. So, a new concept of organismic boundary is introduced and discussed, by which the organismic boundary is the (concrete) part of an organism which spatially encompasses all and only the other (concrete) parts of that organism.

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Notes

  1. 1.

    Nor did they care for it in past decades, as Woodger showed ad abundantiam and repeatedly (1929 1, 19672).

  2. 2.

    I address the reader to this book for further references on the following items. For an extremely interesting list of keywords in theoretical biology see the Konrad Lorenz Institute Theory Lab website at http://www.kli.ac.at/theorylab/index.html.

  3. 3.

    Conceptual oppositions are of particular interest in biology: ‘[b]iology is a science of antitheses’ (Woodger 1967: 11). See Gil (1978) for a general survey on conceptual oppositions.

  4. 4.

    My personal collection of biological terms starting with the prefixoid auto-includes more than fifty entries, see Ramellini (2006b: 111 ff).

  5. 5.

    Compare these types with Woodger’s list of the modes of biological analysis: perceptual (usually visual), genetical, manual (above all visual and tactual), physiological and chemical (1967: 274–275).

  6. 6.

    On the importance of optical boundaries in the genesis of the concept of cell see however Woodger (19672: 158).

  7. 7.

    I also recall the case of «glassy» fishes like Parambassis ranga, whose thoraco-abdominal muscles are nearly transparent, making their «visible» boundary invisible to predators (interestingly, glassy fishes are often sold after injections of fluorescent dyes into their bodies, to make them more appealing to aquarists, who evidently are not predators). Transparent living bodies account for Portmann’s caveat about opaque surfaces. The physical basis of transparency is still poorly understood (Johnsen and Widder 1999).

  8. 8.

    This optical illusion is also due to a photoabsorbent layer, the choroid, behind the pupil. However, many animals – like dogs – possess a light-reflecting layer behind or within the retina, i.e. the tapetum lucidum, allowing them a better night vision.

  9. 9.

    Notably, their being erogenous zones due to the presence of superficial nerve networks; see the classical paper by Winkelmann (1959).

  10. 10.

    Sometimes (e.g. Smith and Varzi 1997), the surface of skin alone is considered as the outer boundary of the human body, pointing out that such boundary has discernible sub-boundaries, like the edge-line of mouth or surgery-scars.

  11. 11.

    The set of all the ECs of a human, plus Z, could be compared with the set zgdend as introduced by Woodger (1937: 90).

  12. 12.

    Note that after all the human body is a simple case, since its (living) cells occupy the bulk of the body; in other cases, cells occupy only a small minority of the total volume: for instance, in a trunk of a spermatophyte, almost only its vascular cambium and phloem are composed of (living) cells.

  13. 13.

    Such question, apparently so bizarre, stirred hot debates during the Middle Ages, as to whether Jesus’ blood drops, felt down on the Via Crucis, had resurrected with him.

  14. 14.

    According to Foucault, ‘[L’objet de l’histoire naturelle] est donné par des surfaces et des lignes, non par des fonctionnements ou d’invisible tissus. La plante et l’animal se voient moins en leur unité organique que par la découpe visible de leurs organs’ (1966: 149). Cuvier ‘fait déborder – et largement – la fonction par rapport à l’organe, et soumet la disposition de l’organe à la souveraineté de la fonction’ (ivi: 276). In sum, “tout au long de l’âge classique la vie relevait d’une ontologie qui concernait de la même façon tous les êtres matériels, soumis à l’étendue, à la pesanteur, au mouvement; ... à partir de Cuvier, le vivant échappe, au moins en première instance, aux lois générales de l’être etendu” (ivi: 286, emphasis added).

  15. 15.

    For these two technical terms see Smith (1994) and Varzi (2004).

  16. 16.

    For a thorough discussion see Ramellini (2006).

  17. 17.

    That is, I shall not tackle here the problem of the boundary of a living part of an organism, like a hepatocyte or possibly a heart. Actually, while the boundary of a cell inside a multicellular seems rather clear, with tissues or organs it becomes far more blurry, to the point that I doubt that we can recognize a heart as a living part (Ramellini 2006a).

  18. 18.

    Though concepts like co-movability or solidarity still need in my opinion a better explication (for an interesting approach see Hoffman and Rosenkrantz 1997: 80 ff.), it is at least clear that here I am speaking of a physical, rather than a topological, closeness, contact or attachment. For an alternative viewpoint, according to which attachment is not so important, see the concept of extended phenotype in Dawkins (1982).

  19. 19.

    The statocyst is an organ capable of sensing the gravitational field, thanks to little stones made of sand grains called statoliths; this has obviously tempted biologists to give the shrimps tiny magnets instead of sand, inducing them to orientate according to the resultant of magnetic and gravitational fields.

  20. 20.

    Besides, in plants uric acid is a precursor of ureids, organic compounds which play an important role in transporting nitrogen from roots to other organs of the plant.

  21. 21.

    Like in the famous xiphopagus twins Chang and Eng Bunker (1811–1874), whose conjunction simply involved a band of cartilage in the xiphoid process of their chests.

  22. 22.

    Like in cephalothoracopagus twins, with sharing of head, neck, chest, and hence usually heart and brain.

  23. 23.

    However, if it were shown that, say, digestive processes in the fused intestine are physiologically separated, this would cast doubt on the diplozoon being only one organism.

  24. 24.

    A possible exception could be given by a living body L composed of three parts ABC, placed consecutively in the sense of its length; if A and C are inter-subordinated, they will constitute an organism O, which will result – modelled as a topological space – a disjoint union; however, it would be controversial whether AC were an organismically living body. Smith and Varzi (1997) say that it is reasonable to assume that all bona fide objects are connected; in this case, the question is about which entity is the bona fide object: L, or O, or both?

  25. 25.

    Besides, the concept of organismic boundary is logically posterior to the concept of organism; i.e., while I can define the term ‘organism’ without any reference to boundaries, I cannot define the term ‘organismic boundary’ without a reference to the organism possessing that boundary.

References

  • Ageno, M. 1986. Le radici della biologia. Milano: Feltrinelli.

    Google Scholar 

  • Ageno, M. 19922. Dal non vivente al vivente. Nuove ipotesi sull’origine della vita. Palermo: Theoria.

    Google Scholar 

  • Allen, C., M. Bekoff, and G. Lauder eds. 1998. Nature’s purposes. Cambridge, MA; London: MIT Press.

    Google Scholar 

  • Atlan, H. 1979. Entre le cristal et la fumée. Paris: Seuil.

    Google Scholar 

  • Bertalanffy, L. von. 1968. General system theory. New York: Braziller.

    Google Scholar 

  • Boniolo, G. 2003. Che cos’è il caso in biologia? Riflessioni a partire da J. Monod, Il caso e la necessità. Roma, Atti Convegni Lincei 185:25–44.

    Google Scholar 

  • Boniolo, G., and M. Carrara. 2004. On biological identity. Biology & Philosophy 19:443–457.

    Article  Google Scholar 

  • Brandon, R.N. 1997. Does biology have laws? Philosophy of Science, Proceedings 64:S444–S457.

    Article  Google Scholar 

  • Bunge, M. 1977. Treatise on basic philosophy, vol. 3: Ontology I. Dordrecht-Boston: Reidel.

    Google Scholar 

  • Campbell, D.T. 1974. ‘Downward causation’ in hierarchically organised biological systems. In Studies in the philosophy of biology, eds. F.J. Ayala, and T. Dobzhansky, 179–186. London: Macmillan.

    Google Scholar 

  • Casati, R., and A. Varzi. 1999. Parts and places. Cambrige, MA; London: MIT Press.

    Google Scholar 

  • Coyne, J., and H. Allen Orr. 2004. Speciation. Sunderland, MA: Sinauer.

    Google Scholar 

  • Dawkins, R. 1982. The extended phenotype. Oxford: W. H. Freeman.

    Google Scholar 

  • De Rossi, P. 2006. The so-called human body. In: The organism in interdisciplinary context, ed. P. Ramellini, 113–127. Vatican: LEV.

    Google Scholar 

  • Diderot, D. 1769. La rêve de D’Alembert. In: 1875–1877. Oeuvres complètes de Diderot, ed. J. Assézat. Paris: Garnier, t. 2.

    Google Scholar 

  • Edelman, G.M. 1988. Topobiology. New York: Basic Books.

    Google Scholar 

  • Foerster, H. von. 1960. On self-organizing systems and their environments. In: Self-organizing systems, eds. M.C. Yovits, and S. Cameron, 31–50. London: Pergamon Press.

    Google Scholar 

  • Foerster, H. von. 1982. Observing systems. Seaside: Intersystems Publications.

    Google Scholar 

  • Ford, N. M. 1988. When did I begin? Cambridge: Cambridge University Press

    Book  Google Scholar 

  • Foucault, M. 1966. Les mots et les choses. Paris: Gallimard.

    Google Scholar 

  • Fry, I. 2000. The emergence of life on Earth. New Brunswick, NJ: Rutgers University Press.

    Google Scholar 

  • Ghiselin, M.T. 1974. A radical solution to the species problem. Systematic Zoology 23:536–544

    Article  Google Scholar 

  • Gil, F. 1978. Coppie filosofiche, 1050–1095. In: Enciclopedia Einaudi, vol. 3. Torino: Einaudi.

    Google Scholar 

  • Haldane, J.S. 1931. The philosophical basis of biology. London: Hodder & Stoughton.

    Google Scholar 

  • Hoffman, J., and G.S. Rosenkrantz. 1997. Substance: Its nature and existence. London: Routledge.

    Google Scholar 

  • Hoffmeyer, J. 1998. Surfaces inside surfaces: On the origin of agency and life. Cybernetics & Human Knowing 5(1):33–42.

    Google Scholar 

  • Gibson, J.J. 1950. The perception of the visual World. Boston, MA: Houghton-Mifflin.

    Google Scholar 

  • Jacquette, D. 2002. Ontology. Chesham: Acumen Publishing.

    Google Scholar 

  • Johnsen, S., and E.A. Widder. 1999. The physical basis of transparency in biological tissue: Ultrastructure and the minimization of light scattering. Journal of Theoretical Biology 199(2):181–198.

    Article  Google Scholar 

  • Jonas, H. 1966. The phenomenon of life. New York: Harper & Row.

    Google Scholar 

  • Kauffman, S.A. 1995. At home in the universe. New York: Oxford University Press.

    Google Scholar 

  • Kauffman, S.A. 2000. Investigations. New York: Oxford University Press.

    Google Scholar 

  • Keller, E.F. 2001. Beyond the gene but beneath the skin. In Cycles of contingency, eds. S. Oyama, P.E. Griffiths, and R.D. Gray, 299–312. Cambridge, MA: MIT Press.

    Google Scholar 

  • Laubichler, M.D., and G.P. Wagner. 2000. Organism and character decomposition: Steps towards an integrative theory of biology. Philosophy of Science, Proceedings 67:S289–S300.

    Article  Google Scholar 

  • Luisi, P.L. 2006. The emergence of life. Cambridge etc.: Cambridge University Press.

    Book  Google Scholar 

  • Mahner, M., and M. Bunge. 1997. Foundations of biophilosophy. Berlin-Heidelberg-New York: Springer.

    Book  Google Scholar 

  • Maturana, H.R., and F.J. Varela. 1980. Autopoiesis and cognition. Dordrecht etc.: Reidel.

    Book  Google Scholar 

  • Mayr, E. 1982. The growth of biological thought. Cambridge, MA; London: Harvard University Press.

    Google Scholar 

  • Monod, J. 1970. Le hasard et la nécessité. Paris: Seuil.

    Google Scholar 

  • Needham, J. 1936. Order and life. Cambridge; New Haven: Cambridge & Yale University Press.

    Google Scholar 

  • NIH (U. S. National Institutes of Health). 2006. Stem cell information. http://stemcells.nih.gov/. Accessed 2006-09-14.

  • Oyama, S. 1985. The ontogeny of information. Cambridge: Cambridge University Press.

    Google Scholar 

  • Piaget, J. 1967. Biologie et connaissance. Paris: Gallimard.

    Google Scholar 

  • Poli, R. 2001. The basic problems of the theory of levels of reality. Axiomathes 12(3–4):261–283.

    Article  Google Scholar 

  • Portmann, A. 1965. Aufbruch der Lebensforschung. Zürich: Rhein.

    Google Scholar 

  • Ramellini, P. 2001. Dai livelli di organizzazione ai livelli biologici. Systema Naturae 3:203–213. http://www.biologiateorica.it/systemanaturae/art2001/Ramellini.pdf

  • Ramellini, P. 2002. Prolegomeni alla biologia: dalla percezione alla classificazione. Epistemologia 25:185–198.

    Google Scholar 

  • Ramellini, P. 2003. L’evoluzione al tempo della postgenomica (e oltre). In La Nuova Scienza, vol. 4: La società infobiologica, eds. U. Colombo, and G. Lanzavecchia, 81–90. Milano: Libri Scheiwiller.

    Google Scholar 

  • Ramellini, P. 2006a. Life and Organisms. Vatican: LEV.

    Google Scholar 

  • Ramellini, P. 2006b. Il corpo vivo. Siena: Cantagalli.

    Google Scholar 

  • Ramellini, P. 2007. Temi di biologia teorica. Roma: Pontifical University ‘Regina Apostolorum’.

    Google Scholar 

  • Rashevsky, N. 1961. Mathematical principles in biology and their applications. Springfield, IL: Thomas.

    Google Scholar 

  • Rizzotti, M. ed. 1996. Defining life. Padova: University of Padova.

    Google Scholar 

  • Rosen, R. 2000. Essays on life itself. New York: Columbia University Press.

    Google Scholar 

  • Salthe, S.N. 1993. Development and evolution: Complexity and change in biology. Cambridge, MA: MIT Press.

    Google Scholar 

  • Schiller, J. 1978. La notion d’organisation dans l’histoire de la biologie. Paris: Maloine.

    Google Scholar 

  • Schuh, R. 2000. Biological systematics. Ithaca: Cornell University Press.

    Google Scholar 

  • Simons, P. 1987. Parts: A study in ontology. Oxford: Clarendon.

    Google Scholar 

  • Smith, B. 1994. Fiat objects. In Parts and wholes: Conceptual part-whole relations and formal mereology, eds. N. Guarino, S. Pribbenow, and L. Vieu, 15–23. Proceedings of the ECAI94 Workshop, Amsterdam, ECCAI.

    Google Scholar 

  • Smith, B., and A. Varzi. 1997. The formal ontology of boundaries The Electronic Journal of Analytic Philosophy (online publication), 5. http://ejap.louisiana.edu/EJAP/1997.spring/smithvarzi976.html

  • Smith, B., and A. Varzi. 2000. Fiat and Bona Fide boundaries. Philosophy and Phenomenological Research 60:401–420.

    Article  Google Scholar 

  • Smith, B., and A. Varzi. 2002. Surrounding space: On the ontology of organism-environment relations. Theory in Biosciences 120:139–162.

    Google Scholar 

  • Stroll, A. 1988. Surfaces. Minneapolis: University of Minnesota Press.

    Google Scholar 

  • Thagard, P. 1999. How scientists explain disease. Princeton, NJ: Princeton University Press.

    Google Scholar 

  • Thom, R. 1998. Goethe e la pregnanza delle origini. In: Goethe scienziato, eds. G. Giorello, and A. Grieco, 253–297. Torino: Einaudi.

    Google Scholar 

  • Varzi, A. 2004. Boundary. In: The stanford encyclopedia of philosophy (Spring 2004 Edition), ed. E.N. Zalta. http://plato.stanford.edu/archives/spr2004/entries/boundary.

  • Wilson, J.A. 1999. Biological individuality. Cambridge: Cambridge University Press.

    Book  Google Scholar 

  • Wilson, M. 2005. Microbial inhabitants of humans. Cambridge etc.: Cambridge University Press.

    Google Scholar 

  • Wimsatt, W.C. 1976. Complexity and organization. In Topics in the philosophy of biology, eds. M. Grene, and E. Mendelsohn, 174–193. Dordrecht-Boston: Reidel.

    Chapter  Google Scholar 

  • Winkelmann, R.K. 1959. The erogenous zones: Their nerve supply and significance. Mayo Clinic proceedings. Mayo Clinic 34(2):39–47.

    Google Scholar 

  • Woodger, J.H. 19291. Biological principles. London: Routledge & Kegan (London-New York, Routledge & Kegan-Humanities Press, 19672).

    Google Scholar 

  • Woodger, J.H. 1937. The axiomatic method in biology. Cambridge: Cambridge University Press.

    Google Scholar 

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Acknowledgements

This work is supported by a grant from the John Templeton Foundation, and is part of the Research Project ‘The Organism in Interdisciplinary Context’ of the STOQ Project. I thank my friend and philosopher Alberto Bertini for helpful comments and incessant encouragement, Roberto Poli for having invited me to reflect more carefully upon the links between ontology and biology, and an anonymous referee for his or her valuable suggestions.

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Ramellini, P. (2010). Boundary Questions Between Ontology and Biology. In: Poli, R., Seibt, J. (eds) Theory and Applications of Ontology: Philosophical Perspectives. Springer, Dordrecht. https://doi.org/10.1007/978-90-481-8845-1_8

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