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javaPlex: A Research Software Package for Persistent (Co)Homology

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Mathematical Software – ICMS 2014 (ICMS 2014)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 8592))

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The computation of persistent homology has proven a fundamental component of the nascent field of topological data analysis and computational topology. We describe a new software package for topological computation, with design focus on needs of the research community. This tool, replacing previous jPlex and Plex, enables researchers to access state of the art algorithms for persistent homology, cohomology, hom complexes, filtered simplicial complexes, filtered cell complexes, witness complex constructions, and many more essential components of computational topology.

We describe, herewithin, the design goals we have chosen, as well as the resulting software package, and some of its more novel capabilities.

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  1. Carlsson, G.: Topology and data. Bulletin of the American Mathematical Society 46(2), 255–308 (2009)

    Article  MATH  MathSciNet  Google Scholar 

  2. de Silva, V., Carlsson, G.: Topological estimation using witness complexes. In: Alexa, M., Rusinkiewicz, S. (eds.) Eurographics Symposium on Point-Based Graphics. The Eurographics Association (2004)

    Google Scholar 

  3. De Silva, V., Morozov, D., Vejdemo-Johansson, M.: Dualities in persistent (co) homology. Inverse Problems 27(12), 124003 (2011)

    Article  MathSciNet  Google Scholar 

  4. Edelsbrunner, H., Letscher, D., Zomorodian, A.: Topological persistence and simplification. Discrete Comput. Geom. 28(4), 511–533 (2002), Discrete and computational geometry and graph drawing (Columbia, SC, 2001). MR 1949898 (2003m:52019)

    Google Scholar 

  5. Tausz, A., Carlsson, G.: Homological Coordinatization (2011) (preprint)

    Google Scholar 

  6. Zomorodian, A., Carlsson, G.: Computing persistent homology. Discrete Comput. Geom. 33, 249–274 (2005)

    Article  MATH  MathSciNet  Google Scholar 

  7. Zomorodian, A.: Fast construction of the Vietoris-Rips complex. Computers & Graphics 34(3), 263–271 (2010)

    Article  Google Scholar 

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Adams, H., Tausz, A., Vejdemo-Johansson, M. (2014). javaPlex: A Research Software Package for Persistent (Co)Homology. In: Hong, H., Yap, C. (eds) Mathematical Software – ICMS 2014. ICMS 2014. Lecture Notes in Computer Science, vol 8592. Springer, Berlin, Heidelberg.

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  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-662-44198-5

  • Online ISBN: 978-3-662-44199-2

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