Abstract
After antigen binding, a subset of newly activated B and T cells is recruited into the primary follicles of lymphoid tissue where, along with follicular dendritic cells, they establish a site of vigorous lymphocyte proliferation. Within these germinal centers the processes of somatic hypermutation and selection result in the affinity maturation of antigen receptors (see, e.g., Kelsoe 1996; Wagner and Neuberger 1996). Mutation rates at the rearranged V(D)J locus and the flanking introns are up to 106 times higher than background. During the germinal center reaction, the affinities of immunoglobulins (Igs) for the eliciting antigen typically increase by factors of ten or 100 in the B cells that go on to become memory cells. Using antigen as a limited resource in a miniaturized Darwinian struggle for survival among lymphocytes is an essential component of the overall strategy employed by the immune system to effectively combat the vast majority of pathogens. Somatic mutation — though not necessarily accompanied by affinity maturation — has been described in many species, including, remarkably, (Hinds-Frey et al. 1993), the earliest extant animal with an adaptive immune system (Du Pasquier 1993)
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Acha-Orbea H, Mitchell DJ, Timmermann L, Wraith DC, Tausch GS, Waldor MK, Zamvil SS, McDevitt HO, Steinman L (1988) Limited heterogeneity of T cell receptors from lymphocytes mediating autoimmune encephalomyelitis allows specific immune intervention. Cell 54:263–273
Arden B, Clark SP, Kabelitz D, Mak TW (1995a) Human T-cell receptor variable gene segment families. Immunogenetics 42:455–500
Arden B, Clark SP, Kabelitz D, Mak TW (1995b) Mouse T-cell receptor variable gene segment families. Immunogenetics 42:501–530
Bachi J, Wabl M (1995) Do T-cells hypermutate? Nature 375:286
Bentley GA, Mariuzza RA (1996) The structure of the T cell antigen receptor. Annu Rev Immunol 14:563–590
Betz AG, Rada C, Pannell R, Milstein C, Neuberger MS (1993) Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: clustering, polarity and specific hot spots. Proc Natl Acad Sci USA 90:2385–2388
Chang B, Casali P (1994) The CDR1 sequences of a major proportion of human germline Ig VH sequences are inherently susceptible to amino acid replacement. Immunol Today 15:367–373
Chothia C, Boswell DR, Lesk AM (1988) The outline structure of the T-cell αβ receptor. EMBO J 7(12):3745–3755
Claverie J-M, Prochnicka-Chalufour A, Bouguelerat L (1989) Implications of a Fab-like structure for the T-cell receptor. Immunol Today 10:10–14
Davis MM, Bjorkman PJ (1988) T-cell antigen receptor genes and T-cell recognition. Nature 334:395–402
Dénepoux S, Razanajoana D, Blanchard D, Meffre G, Capra JD, Banchereau J, Lebecque S (1997) Induction of somatic mutation in a human B cell line in vitro. Immunity 6:35–46
Du Pasquier L (1993) Evolution of the immune system. In Paul W (1993) Fundamental Immunology, 3rd edn. Raven, New York, pp 199–234
Engel I, Hedrick SM (1988) Site-directed mutations in the VDJ junctional region of a T cell receptor beta chain cause changes in antigenic peptide recognition. Cell 54:473–484
Fink PJ, Matis LA, McElligott DL, Bookman M, Hedrick SM (1986) Correlations between T cell specificity and the structure of the antigen receptor. Nature 321:219–226
Garcia KC, Degano M, Stanfield RL, Brunmark A, Jackson MR, Peterson PA, Teyton L, Wilson IA (1996) An alpha beta T cell receptor structure at 2.5 A and its orientation in the TCR-MHC complex. Science 274:209–219
Grantham R, Gautier C, Gouy M (1980) Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type. Nucleic Acids Res 8:1893–1912
Hinds-Frey KR, Nishikata H, Litman RT, Litman GW (1993) Somatic variation precedes extensive diversification of germline sequences and combinatorial joining in the evolution of immunoglobulin heavy chain diversity. J Exp Med 178:815–824
Hughes AL, Nei M (1988) Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection. Nature 335:167–170
Jorgensen JL, Reay PA, Ehrich EW, Davis MM (1992) Molecular components of T-cell recognition. Annu Rev Immunol 10:835–73
Kabat EA, Wu TT, Perry HM, Gottesman KS, Foeller G (1991) Sequences of proteins of immunological interest, 5th edn. Department of Health Services, National Institutes of Health, Bethesda, pp 2130–2146
Kelsoe G (1996) Life and death in germinal centers (redux). Immunity 4:107–110
Kelsoe G, Zheng B, Kepler TB (1995) Do T-cells hypermutate? Nature 375:286 (response to Bachi and Wabl)
Kepler TB (1997) Codon bias and plasticity in immunoglobulins. Mol Biol Evol 14:637–643
Kepler TB, Perelson AS (1993) Somatic hypermutation in B cells: an optimal control treatment. J Theor Biol 164:37–64
Lewis SM (1994) The mechanism of V(D)J joining: lessons from molecular, immunological, and comparative analyses. Adv Immunol 56:27–150
Maynard-Smith J, Smith NH (1996) Site-specific codon bias in bacteria. Genetics 142:1037–1043
Möller G (1990) (ed) Immunol Rev 115
Motoyama N, Okada H, Azuma T (1991) Somatic mutation in constant regions of mouse lambda_1 light chains. Proc Natl Acad Sci 88:7933–7373
Reynaud CA, Garcia C, Weill J-C (1995) Hypermutation generating the sheep immunoglobulin repertoire is an antigen-independent process. Cell 80:115–125
Rogozin IB, Kolchanov NA (1992) Somatic hypermutagenesis in immunoglobulin genes. II. Influence of neighboring base sequences on mutagenesis. Biochim et Biophys Acta 1171:11–18
Rothenfluh H, Blanden RV, Steele EJ (1995) Evolution of V genes: DNA sequence structure of functional germline genes and pseudogenes. Immunogenetics 42:159–171
Smith AS, Creadon G, Jena PK, Portanova JP, Kotzin BL, Wysocki LJ (1996) Di- and trinucleotide target preferences of somatic mutagenesis in normal and autoreactive B cells. J Immunol 156:2642–2652
Sorger SB, Paterson Y, Fink PJ, Hedrick SM (1990) T cell receptor junctional regions and the MHC molecule affect the recognition of antigenic peptides by T cell clones. J Immunol 144(3): 1127–1135
Steel RGD, Torrie JH, Dickie DA (1996) Principles and procedures of statistics: a biometrical approach, 3rd edn. McGraw-Hill, New York, pp 286–299
Stewart J, Coutinho A (1996) (eds) The evolutionary origins of immunoglobulins and T-cell receptors. Res Immunol 147
Tanaka T, Nei M (1989) Positive Darwinian selection observed at the variable-region genes of immunoglobulins. Mol Biol Evol 6:447–459
Tomlinson IM, Williams SC, Corbe, SJ, Cox JBL, Winter G (1996) V BASE sequence directory MRC centre for protein engineering. Cambridge, UK (URL: http://www.mrc-cpe.cam.uk/imt-doc/vbase-home-page.html)
Van der Stoep N, Van der Linden J, Logtenberg T (1993) Molecular evolution of the human immunoglobulin E response: high incidence of shared mutations and clonal relatedness among VH5 transcripts from three unrelated patients with atopic dermatitis. J Exp Med 177:99–107
Varade WS, Marin E, Kittelberger AM, Insel RA (1993) Use of the most J_H-proximal human Ig H chain V region gene, V_H6, in the expressed immune repertoire. J Immunol 150:4985–4995
Wagner SJ, Neuberger MS (1996) Somatic hypermutation of immunoglobulin genes. Annu Rev Immunol 14:441–458
Wagner SJ, Milstein C, Neuberger MS (1995) Codon bias targets mutation. Nature 376:732
Wilson M, Hsu E, Marcuz A, Courtet L, Du Pasquier L, Steinberg C (1992) What limits affinity maturation of antibodies in Xenopus — the rate of somatic mutation or the ability to select mutants? EMBO J 11:4337–4347
Zheng B, Xue W, Kelsoe G (1994) Locus-specific somatic hypermutation in germinal centre T cells. Nature 372:556–559
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 1998 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Kepler, T.B., Bartl, S. (1998). Plasticity Under Somatic Mutation in Antigen Receptors. In: Kelsoe, G., Flajnik, M.F. (eds) Somatic Diversification of Immune Responses. Current Topics in Microbiology and Immunology, vol 229. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-71984-4_11
Download citation
DOI: https://doi.org/10.1007/978-3-642-71984-4_11
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-71986-8
Online ISBN: 978-3-642-71984-4
eBook Packages: Springer Book Archive