Biomedical Inorganic Polymers pp 39-63 | Cite as
Enzymes of Inorganic Polyphosphate Metabolism
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Abstract
Inorganic polyphosphate (PolyP) is a linear polymer containing a few to several hundred orthophosphate residues linked by energy-rich phosphoanhydride bonds. Investigation of PolyP-metabolizing enzymes is important for medicine, because PolyPs perform numerous functions in the cells. In human organism, PolyPs are involved in the regulation of Ca2+ uptake in mitochondria, bone tissue development, and blood coagulation. The essentiality of polyphosphate kinases in the virulence of pathogenic bacteria is a basis for the discovery of new antibiotics. The properties of the major enzymes of PolyP metabolism, first of all polyphosphate kinases and exopolyphosphatases, are described in the review. The main differences between the enzymes of PolyP biosynthesis and utilization of prokaryotic and eukaryotic cells, as well as the multiple functions of some enzymes of PolyP metabolism, are considered.
Keywords
Amino Acid Starvation Phosphate Residue Polyphosphate Kinase Phosphoryl Donor Ppk1 GeneNotes
Acknowledgments
The authors were supported by the Russian Foundation for Basic Research (Grant 11-04-01009). We thank E. Makeeva for her help with preparation of the manuscript.
References
- Ahn K, Kornberg A (1990) Polyphosphate kinase from Escherichia coli. J Biol Chem 265:11734–11739PubMedGoogle Scholar
- Akiyama M, Crooke E, Kornberg A (1992) The polyphosphate kinase gene of Escherichia coli. Isolation and sequence of the ppk gene and membrane location of the protein. J Biol Chem 267:22556–22561PubMedGoogle Scholar
- Akiyama M, Crooke E, Kornberg A (1993) An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon. J Biol Chem 268:633–639PubMedGoogle Scholar
- Andreeva NA, Okorokov LA (1993) Purification and characterization of highly active and stable polyphosphatase from Saccharomyces cerevisiae cell envelope. Yeast 9:127–139PubMedGoogle Scholar
- Andreeva NA, Okorokov LA, Kulaev IS (1990) Purification and certain properties of cell envelope polyphosphatase of the yeast Saccharomyces carlsbergensis. Biochemistry (Mosc) 55:819–826Google Scholar
- Andreeva NA, Kulakovskaya TV, Kulaev IS (1994) Characteristics of the cytosol polyphosphatase activity of the yeast Saccharomyces cerevisiae. Biochemistry (Mosc) 59:1411–1417Google Scholar
- Andreeva NA, Kulakovskaya TV, Karpov AV, Sidorov IA, Kulaev IS (1998a) Purification and properties of polyphosphatase from Saccharomyces cerevisiae cytosol. Yeast 14:383–390PubMedGoogle Scholar
- Andreeva NA, Kulakovskaya TV, Kulaev IS (1998b) Purification and properties of еxopolyphosphatase isolated from Saccharomyces cerevisiae vacuoles. FEBS Lett 429:194–196PubMedGoogle Scholar
- Andreeva NА, Kulakovskaya TV, Kulaev IS (2000) Inorganic polyphosphates and phosphohydrolases in Halobacterium salinarium. Mikrobiologiia 69:499–505PubMedGoogle Scholar
- Andreeva NA, Kulakovskaya TV, Kulaev IS (2004) Purification and properties of exopolyphosphatase from the cytosol of Saccharomyces cerevisiae not encoded by the PPX1 gene. Biochemistry (Mosc) 69:387–393Google Scholar
- Andreeva NA, Kulakovskaya TV, Kulaev IS (2006) High molecular mass exopolyphosphatase from the cytosol of the yeast Saccharomyces cerevisiae is encoded by the PPN1 gene. Biochemistry (Mosc) 71:975–977Google Scholar
- Ault-Riché D, Fraley CD, Tzeng CM, Kornberg A (1998) Novel assay reveals multiple pathways regulating stress-induced accumulations of inorganic polyphosphate in Escherichia coli. J Bacteriol 180:1841–1847PubMedCentralPubMedGoogle Scholar
- Ayraud S, Janvier B, Labigne A, Ecobichon C, Burucoa C, Fauchere JL (2005) Polyphosphate kinase: a new colonization factor of Helicobacter pylori. FEMS Microbiol Lett 243:45–50PubMedGoogle Scholar
- Bolesch DG, Keasling JD (2000) Polyphosphate binding and chain length recognition of Escherichia coli exopolyphosphatase. J Biol Chem 275:33814–33819PubMedGoogle Scholar
- Bonting CF, Korstee GJ, Zehnder AJ (1991) Properties of polyphosphate:AMP phosphotransferase of Acinetobacter strain 210A. J Bacteriol 173:6484–6488PubMedCentralPubMedGoogle Scholar
- Bonting CF, Korstee GJ, Zehnder AJ (1993) Properties of polyphosphatase of Acinetobacter johnsonii 210A. Antonie van Leeuwenhoek 64:75–81PubMedGoogle Scholar
- Brown MR, Kornberg A (2008) The long and short of it—polyphosphate, PPK and bacterial survival. Trends Biochem Sci 33:284–290PubMedGoogle Scholar
- Caen J, Wu Q (2010) Hageman factor, platelets and polyphosphates: early history and recent connection. J Thromb Haemost 8:1670–1674PubMedCentralPubMedGoogle Scholar
- Cardona ST, Chaves FP, Jerez CA (2002) The exopolyphosphatase gene from Sulfolobus solfataricus: characterization of the first gene found to be involved in polyphosphate metabolism in Archaea. Appl Environ Microbiol 68:4812–4819PubMedCentralPubMedGoogle Scholar
- Crooke E, Akiyama M, Rao NN, Kornberg A (1994) Genetically altered levels of inorganic polyphosphate in Escherichia coli. J Biol Chem 269:6290–6295PubMedGoogle Scholar
- Dirheimer G, Ebel JP (1965) Characterisation d’une polyphosphate AMP-phosphotransferase dans Corynebacterium xerosis. R C Acad Sci Paris 260:3787–3790Google Scholar
- Docampo R, Moreno SN (2001) The acidocalcisome. Mol Biochem Parasitol 114:151–159PubMedGoogle Scholar
- Duan RD (2006) Alkaline sphingomyelinase: an old enzyme with novel implications. Biochim Biophys Acta 1761:281–291PubMedGoogle Scholar
- Fillipovich SY, Afanasieva TP, Bachurina GP, Kritskii MS (2000) ATP and polyphosphate-dependent bacterial NAD+-kinases. Appl Biochem Microbiol (Mosc) 36:117–121Google Scholar
- Gabel NW, Thomas V (1971) Evidence for the occurrence and distribution of inorganic polyphosphates in vertebrate tissues. J Neurochem 18:1229–1242PubMedGoogle Scholar
- Gangaiah D, Liu Z, Arcos J, Kassem II, Sanad Y, Torrelles JB, Rajashekara G (2010) Polyphosphate kinase 2: a novel determinant of stress responses and pathogenesis in Campylobacter jejuni. PLoS One 5(8):e12142Google Scholar
- Gómez-García MR, Kornberg A (2004) Formation of an actin-like filament concurrent with the enzymatic synthesis of inorganic polyphosphate. Proc Natl Acad Sci USA 101:15876–15880PubMedGoogle Scholar
- Guranowski A, Starzynska E, Barnes LD, Robinson AK, Liu S (1998) Adenosine 5′-tetraphosphate phosphohydrolase activity is an inherent property of soluble exopolyphosphatase from Saccharomyces cerevisiae. Biochem Biophys Acta 1380:232–238PubMedGoogle Scholar
- Hooley P, Whitenhead MP, Brown MR (2008) Eukaryote polyphosphate kinases: is the “Kornberg” complex ubiquitous? Trends Biochem Sci 33:577–582PubMedGoogle Scholar
- Hothorn M, Neumann H, Lenherr ED, Wehner M, Rybin V, Hassa PO, Uttenweiler A, Reinhardt M, Schmidt A, Seiler J, Ladurner AG, Herrmann C, Scheffzek K, Mayer A (2009) Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase. Science 324:513–516PubMedGoogle Scholar
- Hsieh PC, Shenoy BC, Jentoft JE, Phillips NFB (1993) Purification of polyphosphate and ATP glucose phosphotransferase from Mycobacterium tuberculosis H37Ra: evidence that poly(P) and ATP glucokinase activities are catalyzed by the same enzyme. Protein Expr Purif 4:76–84PubMedGoogle Scholar
- Hsieh PC, Shenoy BC, Samols D, Phillips NFB (1996) Cloning, expression and characterization of polyphosphate glucokinase from Mycobacterium tuberculosis. J Biol Chem 271:4909–4915PubMedGoogle Scholar
- Ishige K, Noguchi T (2000) Inorganic polyphosphate kinase and adenylate kinase participate in the polyphosphate:AMP phosphotransferase activity of Escherichia coli. Proc Natl Acad Sci USA 976:14168–14171Google Scholar
- Ishige K, Noguchi T (2001) Polyphosphate:AMP phosphotransferase and polyphosphate:ADP phosphotransferase activities of Pseudomonas aeruginosa. Biochem Biophys Res Commun 281:821–826PubMedGoogle Scholar
- Ishige K, Zhang H, Kornberg A (2002) Polyphosphate kinase (PPK2), a potent, polyphosphate-driven generator of GTP. Proc Natl Acad Sci USA 99:16684–16688PubMedGoogle Scholar
- Kawai S, Mori S, Mukai T, Suzuki S, Yamada T, Hashimoto W, Murata K (2000) Inorganic polyphosphate/ATP-NAD kinase of Micrococcus flavus and Mycobacterium tuberculosis H37Rv. Biochem Biophys Res Commun 276:57–63PubMedGoogle Scholar
- Kawai S, Mori S, Mukai T, Hashimoto W, Murata K (2001) Molecular characterization of Escherichia coli NAD kinase. Eur J Biochem 268:4359–4365PubMedGoogle Scholar
- Keasling JD, Bertsh L, Kornberg A (1993) Guanosine pentaphosphate phosphohydrolase of Escherichia coli is a long-chain exopolyphosphatase. Proc Natl Acad Sci USA 90:7029–7033PubMedGoogle Scholar
- Kornberg A, Portola V (2003) Novel antimicrobial therapies. US Patent US 0162691 A1, 28 Aug 2003Google Scholar
- Kornberg A, Kornberg S, Simms E (1956) Methaphosphate synthesis by enzyme from Escherichia coli. Biochim Biophys Acta 20:215–227PubMedGoogle Scholar
- Kornberg A, Rao NN, Ault-Riché D (1999) Inorganic polyphosphate: a molecule with many functions. Annu Rev Biochem 68:89–125PubMedGoogle Scholar
- Kowalczyk TH, Phillips NFB (1993) Determination of endopolyphosphatase using polyphosphate glucokinase. Anal. Biochem 212:194–205PubMedGoogle Scholar
- Kritsky MS, Chernysheva EK, Kulaev IS (1972) Polyphosphate depolymerase activity in cells of the fungus Neurospora crassa (in Russian). Biokhimiia 37:983–990Google Scholar
- Kulaev IS (1994) Inorganic polyphosphate functions at various stages of cell evolution. J Biol Phys 20:255–273Google Scholar
- Kulaev IS, Bobyk MA (1971) Detection of a new enzyme in Neurospora crassa—1,3-diphosphoglycerate:polyphosphatephosphotransferase. Biochemistry (Mosc) 36:356–359Google Scholar
- Kulaev IS, Vagabov VM (1983) Polyphosphate metabolism in microorganisms. Adv Microbiol Physiol 24:83–171Google Scholar
- Kulaev IS, Bobyk MA, Nikolaev NN, Sergeev NS, Uryson SO (1971) Polyphosphate synthesizing enzymes in some fungi and bacteria. Biochemistry (Moscow) 36:791–796Google Scholar
- Kulaev IS, Vagabov VM, Kulakovskaya TV (2004) The biochemistry of inorganic polyphosphates. Wiley, ChichesterGoogle Scholar
- Kulakovskaya TV, Andreeva NA, Kulaev IS (1997) Adenosine-5’-tetraphosphate and guanosine-5’-tetraphosphate–new substrates of the cytosol exopolyphosphatase of Saccharomyces cerevisiae. Biochemistry (Moscow) 62:1180–1184Google Scholar
- Kumble KD, Kornberg A (1995) Inorganic polyphosphate in mammalian cells and tissues. J Biol Chem 270:5818–5822PubMedGoogle Scholar
- Kumble KD, Kornberg A (1996) Endopolyphosphatases for long chain polyphosphate in yeast and mammals. J Biol Chem 271:27146–27151PubMedGoogle Scholar
- Kumble KD, Ahn K, Kornberg A (1996) Phosphohistidylactive sites in polyphosphate kinase of Escherichia coli. Proc Natl Acad Sci USA 93:14391–14395PubMedGoogle Scholar
- Kuroda A (2006) A polyphosphate-Lon protease complex in the adaptation of Escherichia coli to amino acid starvation. Biosci Biotechnol Biochem 70:325–331PubMedGoogle Scholar
- Kuroda A, Ohtake H (2000) Molecular analysis of polyphosphate accumulation in bacteria. Biochemistry (Mosc) 65:304–309Google Scholar
- Lee SJ, Lee YS, Lee YC, Choi YL (2006) Molecular characterization of polyphosphate (PolyP) operon from Serratia marcescens. J Basic Microbiol 46:108–115PubMedGoogle Scholar
- Liao H, Myung S, Zhang YH (2011) One-step purification and immobilization of thermophilic polyphosphate glucokinase from Thermobifida fusca YX: glucose-6-phosphate generation without ATP. Appl Microbiol Biotechnol. doi: 10.1007/s00253-011-3458-1 PubMedCentralGoogle Scholar
- Lichko LP, Kulakovskaya TV, Kulaev IS (2000) Purification and characterization of a soluble polyphosphatase from Mitochondria of Saccharomyces cerevisiae. Biochemistry (Mosc) 65:355–361Google Scholar
- Lichko LP, Andreeva NA, Kulakovskaya TV, Kulaev IS (2003) Exopolyphosphatases of the yeast Saccharomyces cerevisiae. FEMS Yeast Res 3:233–238PubMedGoogle Scholar
- Lichko LP, Kulakovskaya TV, Kulaev IS (2006a) Inorganic polyphosphates and exopolyphosphatases in different cell compartments of Saccharomyces cerevisiae. Biochemistry (Mosc) 71:1171–1175Google Scholar
- Lichko LP, Kulakovskaya TV, Pestov NA, Kulaev IS (2006b) Inactivation of the pp n1 gene exerts different effects on the metabolism of inorganic polyphosphates in the cytosol and the vacuoles of the yeast Saccharomyces cerevisiae. Mikrobiologiia 75:305–311PubMedGoogle Scholar
- Lichko L, Kulakovskaya T, Pestov N, Kulaev I (2006c) Inorganic polyphosphates and exopolyphosphatases in cell compartments of the yeast Saccharomyces cerevisiae under inactivation of PPX1 and PPN1 genes. Biosci Rep 26:45–54PubMedGoogle Scholar
- Lichko LP, Kulakovskaya TV, Kulakovskaya EV, Kulaev IS (2008) Inactivation of PPX1 and PPN1 genes encoding exopolyphosphatases of Saccharomyces cerevisiae does not prevent utilization of polyphosphates as phosphate reserve. Biochemistry (Mosc) 73:985–999Google Scholar
- Lichko LP, Kulakovskaya TV, Kulaev IS (2010) Properties of partially purified endopolyphosphatase of the yeast Saccharomyces cerevisiae. Biochemistry (Mosc) 75:1404–1407Google Scholar
- Lindner SN, Niederholtmeyer H, Schmitz K, Schoberth SM, Wendisch VF (2010) Polyphosphate/ATP-dependent NAD kinase of Corynebacterium glutamicum: biochemical properties and impact of ppnK overexpression on lysine production. Appl Microbiol Biotechnol 87:583–593PubMedGoogle Scholar
- Lorenz B, Schröder HC (2001) Mammalian intestinal alkaline phosphatase acts as highly active exopolyphosphatase. Biochim. Biophys. Acta 1547:254–261PubMedGoogle Scholar
- Luginbuehl E, Kunz S, Wentzinger L, Freimoser F, Seebeck T (2011) The exopolyphosphatase TbrPPX1 of Trypanosoma brucei. BMC Microbiol 11:4PubMedCentralPubMedGoogle Scholar
- Magni G, Di Stefano M, Orsomando G, Raffaelli N, Ruggieri S (2009) NAD(P) biosynthesis enzymes as potential targets for selective drug design. Curr Med Chem 16:1372–1390PubMedGoogle Scholar
- Magnusson LU, Farewell A, Nyström T (2005) ppGpp: a global regulator in Escherichia coli. Trends Microbiol 13:236–242PubMedGoogle Scholar
- Malmgren H (1952) Enzymatic breakdown of polymetaphosphate. V. Purification and specificity of the enzyme. Acta Chem Scand 6:16–26Google Scholar
- Marino N, Marchall JP, Steeg P (2011) Protein-protein interactions: a mechanism regulating the antimetastatic properties of Nm23-H1. Naunyn-Schmiedebergs Arch Pharmacol 384:351–362PubMedGoogle Scholar
- McGrath JW, Kulakova AN, Kulakov LA, Quinn JP (2005) In vitro detection and characterisation of a polyphosphate synthesising activity in the yeast Candida humicola G-1. Res Microbiol 156:485–491PubMedGoogle Scholar
- McMahon KD, Dojka MA, Pace NR, Jenkins D, Keasling JD (2002) Polyphosphate kinase from activated sludge performing enhanced biological phosphorus removal. Appl Environ Microbiol 68:4971–4978PubMedCentralPubMedGoogle Scholar
- Miyake T, Shiba T, Kameda A, Ihara Y, Munekata M, Ishige K, Noguchi T (1999) The gene for an exopolyphosphatase of Pseudomonas aeruginosa. DNA Res 6:103–108PubMedGoogle Scholar
- Mori S, Yamasaki M, Maruyama Y, Momma K, Kawai S, Hashimoto W, Mikami B, Murata K (2004) Crystallographic studies of Mycobacterium tuberculosis polyphosphate/ATP-NAD kinase complexed with NAD. J Biosci Bioeng 98:391–393PubMedGoogle Scholar
- Morita K, Doi K, Kubo T, Takeshita R, Kato S, Shiba T, Akagawa Y (2010) Enhanced initial bone regeneration with inorganic polyphosphate-adsorbed hydroxyapatite. Acta Biomater 6:2808–2815PubMedGoogle Scholar
- Mukai T, Kawai S, Matsukawa H, Matuo Y, Murata K (2003) Characterization and molecular cloning of a novel enzyme, inorganic polyphosphate/ATP-glucomannokinase, of Arthrobacter sp. Strain KM. Appl Environ Microbiol 69:3849–3857PubMedCentralPubMedGoogle Scholar
- Muller O, Neumann H, Bayer MJ, Mayer A (2002) Role of the Vtc proteins in V-ATPase stability and membrane trafficking. J Cell Sci 116:1107–1115Google Scholar
- Müller WE, Wang X, Diehl-Seifert B, Kropf K, Schloßmacher U, Lieberwirth I, Glasser G, Wiens M, Schröder HC (2011) Inorganic polymeric phosphate/polyphosphate as an inducer of alkaline phosphatase and a modulator of intracellular Ca(2+) level in osteoblasts (SaOS-2 cells) in vitro. Acta Biomater 7:2661–2671PubMedGoogle Scholar
- Murata K, Kato J, Chibata I (1979) Continuous production of NADP by immobilized Brevibacterium ammoniagenes cells. Biotechnol Bioeng 21:887–895PubMedGoogle Scholar
- Nocek B, Kochinyan S, Proudfoot M, Brown G, Evdokimova E, Osipiuk J, Edwards AM, Savchenko A, Joachimiak A, Yakunin AF (2008) Polyphosphate-dependent synthesis of ATP and ADP by the family-2 polyphosphate kinases in bacteria. Proc Natl Acad Sci USA 105:17730–17735PubMedGoogle Scholar
- Ogawa N, Tzeng CM, Fraley CD, Kornberg A (2000a) Inorganic polyphosphate in Vibrio cholerae: genetic, biochemical, and physiologic features. J Bacteriol 182:6687–6693PubMedCentralPubMedGoogle Scholar
- Ogawa N, DeRisi J, Brown PO (2000b) New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis. Mol Biol Cell 11:4309–4321PubMedCentralPubMedGoogle Scholar
- Omelon SJ, Grynpas MD (2008) Relationships between polyphosphate chemistry, biochemistry and apatite biomineralization. Chem Rev 208:4694–4715Google Scholar
- Omelon S, Georgiou J, Henneman ZJ, Wise LM, Sukhu B, Hant T, Wynnyckyj S, Holmyard D, Bielecki R, Grynpas MD (2009) Control of vertebrate skeletal mineralization by polyphosphates. PLoS One 4(5):e5634PubMedCentralPubMedGoogle Scholar
- Pavlov E, Aschar-Sobbi R, Campanella M, Turner RJ, Gómez-García MR, Abramov AY (2010) Inorganic polyphosphate and energy metabolism in mammalian cells. J Biol Chem 285:9420–9428PubMedGoogle Scholar
- Pepin CA, Wood HG (1987) The mechanism of utilization of polyphosphate by polyphosphate glucokinase from Propionibacterium shermanii. J Biol Chem 262:5223–5226PubMedGoogle Scholar
- Pestov NA, Kulakovskaya TV, Kulaev IS (2005) Effects of inactivation of the PPN1 gene on exopolyphosphatases, inorganic polyphosphates and function of mitochondria in the yeast Saccharomyces cerevisiae. FEMS Yeast Res 5:823–828PubMedGoogle Scholar
- Petrelli R, Felczak K, Cappellacci L (2011) NMN/NaMN adenylyltransferase (NMNAT) and NAD kinase (NADK) inhibitors: chemistry and potential therapeutic applications. Curr Med Chem 18:1973–1992PubMedGoogle Scholar
- Phillips NFB, Hsien PC, Kowalczyk TH (1999) Polyphosphate glucokinase. In: Schröder HC, Müller WEG (eds) Inorganic polyphosphates. biochemistry, biology, biotechnology, vol 23, Program in cell and molecular biology. Springer, Heidelberg, pp 101–127Google Scholar
- Potrykus K, Cashel M (2008) (p)ppGpp: still magical? Annu Rev Microbiol 62:35–51PubMedGoogle Scholar
- Rao NN, Kornberg A (1996) Inorganic polyphosphate support resistance and survival of stationary-phase Escherichia coli. J Bacteriol 178:1394–1400PubMedCentralPubMedGoogle Scholar
- Rao NN, Liu S, Kormberg A (1998) Inorganic polyphosphate in Escherichia coli: the phosphate regulon and the stringent response. J Bacteriol 180:2186–2193PubMedCentralPubMedGoogle Scholar
- Rao NN, Gómez-García MR, Kornberg A (2009) Inorganic polyphosphate: essential for growth and survival. Ann Rev Biochem 78:605–647PubMedGoogle Scholar
- Reizer J, Reizer A, Jr MH, Saier B, Bork CS (1993) Exopolyphosphate phosphatase and guanosine pentaphosphate phosphatase belong to the sugar kinase/actin/hsp 70 superfamily. Trends Biochem Sci 18:247–248PubMedGoogle Scholar
- Reusch RN (1992) Biological complexes of poly-β-hydroxybutyrate. FEMS Microbiol Rev 103:119–130Google Scholar
- Rodrigues CO, Ruiz FA, Vieira M, Hill JE, Docampo R (2002) An acidocalcisomal exopolyphosphatase from Leishmania major with high affinity for short-chain polyphosphate. J Biol Chem 277:50899–50906PubMedGoogle Scholar
- Schröder HC, Lorenz B, Kurz L, Müller WEG (1999) Inorganic polyphosphate in eukaryotes: enzymes, metabolism and function. In: Schröder HC, Müller WEG (eds) Inorganic polyphosphates. biochemistry, biology, biotechnology, Program in cell and molecular biology. Springer, Heidelberg, pp 45–83Google Scholar
- Schröder HC, Kurz L, Müller WEG, Lorenz B (2000) Polyphosphate in bone. Biochemistry (Mosc) 65:296–304Google Scholar
- Schuddemat J, de Boo R, Van Leeuwen CCM, Van den Broek PJA, Van Steveninck J (1989) Polyphosphate synthesis in yeast. Biochem Biophys Acta 100:191–198Google Scholar
- Segawa S, Fujiya M, Konishi H, Ueno N, Kobayashi N, Shigyo T, Kohgo Y (2011) Probiotic-derived polyphosphate enhances the epithelial barrier function and maintains intestinal homeostasis through integrin-p38 MAPK pathway. PLoS One 6(8):e23278PubMedCentralPubMedGoogle Scholar
- Sethuraman A, Rao NN, Kornberg A (2001) The endopolyphosphatase gene: essential in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 98:8542–8547PubMedGoogle Scholar
- Shabalin YA, Kulaev IS (1989) Solubilization and properties of yeast dolichylpyrophosphate:polyphosphate phosphotransferase. Biokhimiya (Mosc) 54:68–75Google Scholar
- Shabalin YA, Vagabov VM, Tsiomenko AB, Zemlianuhina OA, Kulaev IS (1977) Study of polyphosphate kinase activity in the yeast vacuoles. Biokhimia (Mosc) 42:1642–1648Google Scholar
- Shabalin YA, Vagabov VM, Kulaev IS (1979) On the coupling mechanism of biosynthesis of high-molecular polyphosphates and mannan in Saccharomyces carlsbergensis yeast. Dokl Acad Nauk SSSR 249:243–246Google Scholar
- Shabalin YA, Naumov AV, Vagabov VM, Kulaev IS (1984) The discovery of new enzyme activity dolichyldiphosphate polyphosphate phosphotransferase in yeast. Dokl Acad Nauk SSSR 278:482–485Google Scholar
- Shabalin YA, Vagabov VM, Kulaev IS (1985) Dolichyldiphosphate mannose-an intermediate of glycoprotein biosynthesis in yeast? Dokl Acad Nauk SSSR 283:720–723Google Scholar
- Shiba T, Tsutsumi K, Yano H, Ihara Y, Kameda A, Tanaka K, Takahashi H, Munekata M, Rao NN, Kornberg A (1997) Inorganic polyphosphate and the induction of RPOS expression. Proc Natl Acad Sci USA 94:11210–11215PubMedGoogle Scholar
- Shiba T, Nishimura D, Kawazoe Y, Onodera Y, Tsutsumi K, Nakamura R, Ohshiro M (2003) Modulation of mitogenic activity of fibroblast growth factors by inorganic polyphosphate. J Biol Chem 278:26788–26792PubMedGoogle Scholar
- Shum KT, Lui EL, Wong SC, Yeung P, Sam L, Wang Y, Watt RM, Tanner JA (2011) Aptamer-mediated inhibition of Mycobacterium tuberculosis polyphosphate kinase 2. Biochemistry 50:3261–3271PubMedGoogle Scholar
- Smith SA, Mutch NJ, Baskar D, Rohloff P, Docampo R, Morrissey JH (2006) Polyphosphate modulates blood coagulation and fibrinolysis. Proc Natl Acad Sci USA 103:903–908PubMedGoogle Scholar
- Smith SA, Choi SH, Davis-Harrison R, Huyck J, Boettcher J, Reinstra CM, Morrissey JH (2010) Polyphosphate exerts differential effects on blood clotting, depending on polymer size. Blood 116:4353–4359PubMedGoogle Scholar
- Srivatsan A, Wang JD (2008) Control of bacterial transcription, translation and replication by (p)ppGpp. Curr Opin Microbiol 11:100–105PubMedGoogle Scholar
- Sureka K, Sanyal S, Basu J, Kundu M (2009) Polyphosphate kinase 2: a modulator of nucleoside diphosphate kinase activity in mycobacteria. Mol Microbiol 74:1187–1197PubMedGoogle Scholar
- Szymona M (1957) Utilization of inorganic polyphosphates for phosphorylation of glucose in Mycobacterium phlei. Bull Acad Pol Sci Ser Sci Biol 5:379–381Google Scholar
- Szymona M, Szymona O (1961) Participation of volutin in the hexokinase reaction of Corynebacterium diphtheriae. Bull Acad Pol Sci Ser Sci Biol 9:371–374Google Scholar
- Szymona O, Szymona M (1978) Multiple forms of polyphosphate-glucose phosphotransferase in various Mycobacterium strains. Acta Microbiol Pol 27:73–78PubMedGoogle Scholar
- Tammenkoski M, Moiseev VM, Lahti M, Ugochukwu E, Brondijk TH, White SA, Lahti R (2007) Baykov AA (2007) Kinetic and mutational analyses of the major cytosolic exopolyphosphatase from Saccharomyces cerevisiae. J Biol Chem 282:9302–9311PubMedGoogle Scholar
- Tammenkoski M, Koivula K, Cusanelli E, Zollo M, Steegborn C, Baykov AA, Lahti R (2008) Human metastasis regulator protein H-prune is a short-chain exopolyphosphatase. Biochemistry 47:9707–9713PubMedGoogle Scholar
- Tanaka S, Lee SO, Hamaoka K, Kato J, Takiguchi N, Nakamura K, Ohtake H, Kuroda A (2003) Strictly polyphosphate-dependent glucokinase in a polyphosphate-accumulating bacterium, Microlunatus phosphovorus. J Bacteriol 185:5654–5656PubMedCentralPubMedGoogle Scholar
- Tani C, Ohtomo R, Osaki M, Kuga Y, Ezawa T (2009) ATP-dependent but proton gradient-independent polyphosphate-synthesizing activity in extraradical hyphae of an arbuscular mycorrhizal fungus. Appl Environ Microbiol 75:7044–7050PubMedCentralPubMedGoogle Scholar
- Temperton B, Gilbert JA, Quinn JP, McGrath JW (2011) Novel analysis of oceanic surface water metagenomes suggests importance of polyphosphate metabolism in oligotrophic environments. PLoS One 6:e16499PubMedCentralPubMedGoogle Scholar
- Tinsley CR, Gotschlich EC (1995) Cloning and characterization of the meningococcal polyphosphate kinase gene: production of polyphosphate synthesis mutant. Infect Immun 63:1624–1630PubMedCentralPubMedGoogle Scholar
- Tzeng CM, Kornberg A (1998) Polyphosphate kinase is highly conserved in many bacterial pathogens. Mol Microbiol 29:381–382PubMedGoogle Scholar
- Vagabov VM, Trilisenko LV, Kulakovskaya TV, Kulaev IS (2008) Effect of carbon source on polyphosphate accumulation in Saccharomyces cerevisiae. FEMS Yeast Res 8:877–882PubMedGoogle Scholar
- Varela C, Mauriaca C, Paradela A, Albar JP, Jerez CA, Chávez FP (2010) New structural and functional defects in polyphosphate deficient bacteria: a cellular and proteomic study. BMC Microbiol 10:7PubMedCentralPubMedGoogle Scholar
- Wang L, Fraley CD, Faridi J, Kornberg A, Roth RA (2003) Inorganic polyphosphate stimulates mammalian TOR, a kinase involved in the proliferation of mammary cancer cells. Proc Natl Acad Sci USA 100:11249–11254PubMedGoogle Scholar
- Wurst H, Kornberg A (1994) A soluble exopolyphosphatase of Saccharomyces cerevisiae. J Biol Chem 269:10996–101001PubMedGoogle Scholar
- Wurst H, Shiba T, Kornberg A (1995) The gene for a major exopolyphosphatase of Saccharomyces cerevisiae. J Bacteriol 177:898–906PubMedCentralPubMedGoogle Scholar
- Zhang H, Ishige K, Kornberg A (2002) A polyphosphate kinase (PPK2) widely conserved in bacteria. Proc Natl Acad Sci USA 99:16678–16683PubMedGoogle Scholar
- Zhang H, Gómez-García MR, Brown MR, Kornberg A (2005) Inorganic polyphosphate in Dictyostelium discoideum: influence on development, sporulation, and predation. Proc Natl Acad Sci USA 102:2731–2735PubMedGoogle Scholar
- Zhang H, Gómez-García MR, Shi X, Rao NN, Kornberg A (2007) Polyphosphate kinase 1, a conserved bacterial enzyme, in a eukaryote, Dictyostelium discoideum, with a role in cytokinesis. Proc Natl Acad Sci USA 104:16486–16491PubMedGoogle Scholar
- Zhu Y, Lee SS, Xu W (2003) Crystallization and characterization of polyphosphate kinase from Escherichia coli. Biochem Biophys Res Commun 305:997–1001PubMedGoogle Scholar