A Geometric Morphometric Approach in Assessing Paleontological Problems in Atrypid Taxonomy, Phylogeny, Evolution and Ecology

Chapter
Part of the Springer Theses book series (Springer Theses)

Keywords

Foreland Basin Middle Devonian Late Ordovician Geometric Morphometrics Michigan Basin 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

References

  1. Adams DC, Rosenberg MS (1998) Partial-warps, phylogeny, and ontogeny: a comment on Fink and Zelditch (1995). Sys Biol 47:168–173CrossRefGoogle Scholar
  2. Adams DC, Rohlf FJ, Slice DE (2004) Geometric morphometrics: ten years of progress following the ‘revolution’. Italian J Zool 71:5–16CrossRefGoogle Scholar
  3. Alexander RR (1986) Resistance to and repair of shell breakage induced by durophages in late Ordovician brachiopods. J Paleontol 60:273–285Google Scholar
  4. Ausich WI, Lane NG (1999) Life of the past. Prentice Hall, New JerseyGoogle Scholar
  5. Bernal V, Perez SI, Gonzalez PN (2006) Variation and causal factors of craniofacial robusticity in Patagonian hunter-gatherers from the late Holocene. Am J Hum Biol 18:748–765CrossRefGoogle Scholar
  6. Biernat G (1964) Middle devonian atrypacea (brachiopoda) from the Holy Cross Mountains, Poland. Acta Palaeontol Pol 9:277–356Google Scholar
  7. Bookstein FL (1991) Morphometric tools for landmark data: geometry and biology. Cambridge University Press, CambridgeGoogle Scholar
  8. Bonnan MF (2004) Morphometric analysis of humerus and femur shape in Morrison sauropods: implications for functional morphology and paleobiology. Paleobiology 30(3):444–470CrossRefGoogle Scholar
  9. Bordeaux YL, Brett CE (1990) Substrate specific associations of epibionts on middle devonian brachiopods. Implic Paleoecol Hist Biol 4:203–220CrossRefGoogle Scholar
  10. Bose R, Schneider C, Polly PD, Yacobucci MM (2010) Ecological interactions between Rhipidomella (orthides, brachiopoda) and its endoskeletobionts and predators from the Middle Devonian Dundee Formation of Ohio. U. S. Palaios 25:196–210CrossRefGoogle Scholar
  11. Bose R, Schneider C, Leighton LR, Polly PD (2011a) Influence of atrypid morphological shape on Devonian episkeletobiont assemblages from the lower GENSHAW formation of the Traverse Group of Michigan. Geom Morphometr Approach Palaeogeogr, Palaeoclimatol, Palaeoecol 310:427–441CrossRefGoogle Scholar
  12. Bose R, Leighton LR, Day J, Polly PD (2011) A geometric morphometric approach in testing the taxonomy and phylogeny of eastern North American atrypid brachiopods. Manuscript in preparation for submission to LethaiaGoogle Scholar
  13. Bose R, Polly PD (2011) Morphological evolution in Pseudoatrypa cf. lineata from the middle Devonian traverse Group of Michigan. Manuscript in preparation for submission to PaleobiologyGoogle Scholar
  14. Caumul R, Polly PD (2005) Phylogenetic and environmental components of morphological variation: Skull, mandible, and molar shape in marmots (Marmota, Rodentia). Evolution 59:2460–2472Google Scholar
  15. Cardini A, O’Higgins P (2004) Patterns of morphological evolution in Marmota (Rodentia, Sciuridae): geometric morphometrics of the cranium in the context of marmot phylogeny, ecology and conservation. Biol J Linn Soc 82:385–407CrossRefGoogle Scholar
  16. Copper P (1967) Adaptations and life habits of Devonian atrypid brachiopods. Palaeogeogr Palaeoclimatol Palaeoecol 3:363–379CrossRefGoogle Scholar
  17. Copper P (1973) New Siluro-Devonian atrypoid brachiopods. J Paleontol 47:484–500Google Scholar
  18. Copper P (1977) The Late Silurian brachiopod genus atrypoidea. Geologiska Foreningers Stockholm Forhandligas 99:10–26CrossRefGoogle Scholar
  19. Copper P (1982) Early silurian atrypoids from Manitoulin Island and Bruce Peninsula, Ontario. J Paleontol 56:680–702Google Scholar
  20. Copper P (1990) Evolution of the atrypid brachiopods. In: MacKinnon DI, Lee DE, Campbell JD (eds) Brachiopod through time: proceedings of the second international brachiopod congress, Dunedin, New Zealand, pp 33–39Google Scholar
  21. Copper P (1995) Five new genera of late Ordovician-early silurian brachiopods from Anticosti Island. East Can J Paleontol 69:846–862Google Scholar
  22. Copper P (1997) New and revised genera of Wenlock-Ludlow Atrypids (silurian brachiopoda) from Gotland, Sweden, and the United Kingdom. J Paleontol 70:913–923Google Scholar
  23. Copper P (2001a) Radiations and extinctions of atrypide brachiopods: Ordovician–Devonian. In: Brunton CHC, Cocks LRM, Long SL (eds) Brachiopods past and present. Natural History Museum, London, England, pp 201–211Google Scholar
  24. Copper P (2001b) Reefs during the multiple crises towards the Ordovician-Silurian boundary: Anticosti Island, eastern Canada, and worldwide. Can J Earth Sci 38:153–171CrossRefGoogle Scholar
  25. Copper P (2002) Atrypida. In: Kaesler RL (ed) Brachiopoda (revised), part H of treatise on invertebrate paleontology. The Geological Society of America, Inc. and the University of Kansas, Boulder, Colorado and Lawrence, Kansas, pp. 1377–1474Google Scholar
  26. Copper P (2004) Silurian (Late Llandovery-Ludlow) Atrypid brachiopods from Gotland, Sweden, and the Welsh Borderlands, the Great Britain. National Research Council of Canada Research Press, OttawaGoogle Scholar
  27. Couette S, Escarguel G, Montuire S (2005) Constructing, bootstrapping, and comparing morphometric and phylogenetic trees: a case study of new world monkeys (platyrrhini, primates). J Mammal 86:773–781CrossRefGoogle Scholar
  28. Day J (1995) Brachiopod fauna of the Upper Devonian (late Frasnian) Lime Creek Formation of north-central Iowa, and related units in eastern Iowa. In: Bunker BJ (ed) Geological society of Iowa guidebook, vol 62. pp. 21–40Google Scholar
  29. Day J (1998) Distribution of latest givetian-frasnian atrypida (brachiopoda) in central and western North America. Acta Palaeontol Pol 43:205–240Google Scholar
  30. Day J, Copper P (1998) Revision of latest givetian-frasnian atrypida (brachiopoda) from central North America. Acta Palaeontol Pol 43:155–204Google Scholar
  31. Fenton CL, Fenton MA (1932) Orientation and injury in the genus Atrypa. Am Midl Nat 13:63–74CrossRefGoogle Scholar
  32. Fenton CL, Fenton MA (1935) Atrypae described by Clement L. Webster and related forms (Devonian, Iowa). J Paleontol 9:369–384Google Scholar
  33. Fink WL, Zelditch ML (1995) Phylogenetic analysis of ontogenetic shape transformations: a reassessment of the piranha genus pygocentrus (teleostei). Sys Biol 44:344–361Google Scholar
  34. Frost SR, Marcus LF, Bookstein FL (2003) Cranial allometry, phylogeography, and systematics of large-bodied papionins (Primates: Cercopithecinae) inferred from geometric morphometric analysis of landmark data. Anatomical record Part A-discoveries. Mol Cell Evol Biol 275:1048–1072Google Scholar
  35. Goldman D, Mitchell CE (1990) Morphology, systematics, and evolution of middle devonian ambocoeliidae (brachiopoda), Western New York. J Paleontol 64:79–99Google Scholar
  36. Haney RA, Mitchell CE, Kim K (2001) Geometric morphometric analysis of patterns of shape change in the Ordovician brachiopod Sowerbyella. Palaios 16:115–125Google Scholar
  37. Hayden B, Pulcini D, Kelly-Quinn M, O’Grady M, Caffrey J, McGrath A, Mariani S (2010) Hybridisation between two cyprinid fishes in a novel habitat: genetics, morphology and life-history traits. Evol Biol 10Google Scholar
  38. Hurst JM (1974) Selective epizoan encrustation of some silurian brachiopods from Gotland. Palaeontology 17:423–429Google Scholar
  39. Jin J (2001) Evolution and extinction of the North American Hiscobeccus brachiopod fauna during the late Ordovician. Can J Earth Sci 38:143–151Google Scholar
  40. Kassam D, Adams DC, Yamaoka K (2004) Functional significance of variation in trophic morphology within feeding microbabitat-differentiated cichlid species in Lake Malawi. Animal Biol 54:77–90CrossRefGoogle Scholar
  41. Kesling RV, Hoare RD, Sparks DK (1980) Epizoans of the Middle Devonian brachiopod Paraspirifer bownockeri: their relationships to one another and to their host. J Paleontol 54:1141–1154Google Scholar
  42. Krause RA Jr (2004) An assessment of morphological fidelity in the sub-fossil record of a terebratulide brachiopod. Palaios 19:460–476Google Scholar
  43. Kulemeyer C, Asbahr K, Gunz P, Frahnert S, Bairlein F (2009) Functional morphology and integration of corvid skulls—a 3D geometric morphometric approach. Front Zool 6:1–14CrossRefGoogle Scholar
  44. Leighton LR (2005) Comment—a new angle on strophomenid paleoecology: trace-fossil evidence of an escape Response for the plectambonitoid brachiopod Sowerbyella rugosa from a tempestite in the upper Ordovician kope formation (Edenian) of Northern Kentucky (Dattilo, 2004). Palaios 20:596–600CrossRefGoogle Scholar
  45. Lieberman BS, Brett CE, Eldredge N (1995) A study of stasis in two species lineages from the Middle Devonian of New York State. Paleobiology 21:15–27Google Scholar
  46. Lockwood CA, Kimbel WH, Lynch JM (2004) Morphometrics and hominoid phylogeny: support for a chimpanzee-human clade and differentiation among great ape subspecies. Proc Nat Acad Sci U S A 101:4356–4360CrossRefGoogle Scholar
  47. Ma X, Day J (2007) Morphology and revision of late devonian (early famennian) Cyrtospirifer (brachiopoda) and related genera from South China and North America. J Paleontol 81:286–311CrossRefGoogle Scholar
  48. MacLeod N (1999) Generalizing and extending the eigen shape method of shape space visualization and analysis. Paleobiology 25:107–138Google Scholar
  49. MacLeod N (2001) Landmarks, localization, and the use of morphometrics in phylogenetic analysis. In: Edgecombe G, Adrain J, Lieberman B (eds) Fossils, phylogeny, and form: an analytical approach. Kluwer Academic/Plenum, New York, pp 197–233CrossRefGoogle Scholar
  50. MacLeod N (2002) Testing evolutionary hypotheses with adaptive landscapes: use of random morphological simulation studies: Math Geol 6:45–55Google Scholar
  51. Myers EM, Janzen FJ, Adams DC (2006) Quantitative genetics of plastron shape in slider turtles (Trachemys scripta). Evolution 60:563–572Google Scholar
  52. Novack-Gottshall PM, Lanier MA (2008) Scale-dependence of Cope’s rule in body size evolution of paleozoic brachiopods. Proc Nat Acad Sci 105:5430–5434CrossRefGoogle Scholar
  53. Peck LS (2008) Brachiopods and climate change. Earth Environ Sci Trans Royal Soc Edinb 98:451–456Google Scholar
  54. Pitrat CW, Rogers FS (1978) Spinocyrtia and its epizoans in the traverse group (Devonian) of Michigan. J Paleontol 52:1315–1324Google Scholar
  55. Polly PD (2003) Paleophylogeography: the tempo of geographic differentiation in marmots (marmota). J Mammal 84:369–384CrossRefGoogle Scholar
  56. Polly PD (2004) On the simulation of the evolution of morphological shape: multivariate shape under selection and drift. Palaeontol Electron 7.2.7A:1–28Google Scholar
  57. Polly PD (2005) Development, geography, and sample size in P matrix evolution: molar-shape change in island populations of Sorex araneus. Evol Dev 7:29–41Google Scholar
  58. Polly PD (2007) Adaptive zones and the pinniped ankle: a 3D quantitative analysis of carnivoran tarsal evolution. In: Sargis E, Dagosto M (eds) Mammalian evolutionary morphology: a tribute to Frederick S. Szalay. Springer, Dordrecht, The NetherlandsGoogle Scholar
  59. Richards RP, Shabica CW (1969) Cylindrical living burrows in Ordovician dalmanellid brachiopod beds. J Paleontol 43:838–841Google Scholar
  60. Richards RP (1972) Autecology of Richmondian brachiopods (late Ordovician of Indiana and Ohio). J Paleontol 46:386–405Google Scholar
  61. Rodland DL, Kowalewski M, Carroll M, Simoes MG (2004) Colonization of a ‘Lost World’: encrustation patterns in modern subtropical brachiopod assemblages. Palaios 19:381–395CrossRefGoogle Scholar
  62. Rodland DL, Kowalewski M, Carroll M, Simoes MG (2006) The temporal resolution of epibiont assemblages: are they ecological snapshots or overexposures? J Geol 114:313–324CrossRefGoogle Scholar
  63. Rodrigues SC, Simoes MG, Kowalewski M, Petti MAV, Nonato EF, Martinez S, Rio CDJ (2008) Biotic interaction between spionid polychaetes and bouchardiid brachiopods: paleoecological, taphonomic and evolutionary implications. Acta Palaeontologica Polonica 53:657–668CrossRefGoogle Scholar
  64. Rohlf FJ (1990) Morphometrics. Annu Rev Ecol Sys 21:299–316CrossRefGoogle Scholar
  65. Rohlf FJ (1998) On applications of geometric morphometrics to studies of ontogeny and phylogeny. Sys Biol 47:147–158CrossRefGoogle Scholar
  66. Rook L, O’Higgins P (2005) A comparative study of adult facial morphology and its ontogeny in the fossil macaque Macaca majori from Capo Figari, Sardinia, Italy. Folia Primatologica 76:151–171CrossRefGoogle Scholar
  67. Rudwick MJS (1962) Filter-feeding mechanisms in some brachiopods from New Zealand. J Linn Soc London Zool 44:592–615CrossRefGoogle Scholar
  68. Rudwick MJS (1970) Living and fossil brachiopods. Hutchinson University, LondonGoogle Scholar
  69. Schneider CL, Leighton LR (2007) The influence of spiriferide micro-ornament on Devonian Epizoans. Geol Soc Am Abstr 39:531Google Scholar
  70. Spjeldnaes N (1984) Epifauna as a tool in autecological analysis of silurian brachiopods. Spec Pap Paleontol 32:225–235Google Scholar
  71. Stanley SM (2005) Earth system history. W. H. Freeman and Company, New YorkGoogle Scholar
  72. Stayton CT (2006) Testing hypotheses of convergence with multivariate data: morphological and functional convergence among herbivorous lizards. Evolution 60:824–841Google Scholar
  73. Taylor PD, Wilson MA (2002) A new terminology for marine organisms inhabiting hard substrates. Palaios 17:522–525CrossRefGoogle Scholar
  74. Taylor PD, Wilson MA (2003) Palaeoecology and evolution of marine hard substrate communities. Earth Sci Rev 62:1–103CrossRefGoogle Scholar
  75. Thayer CW (1974) Substrate specificity of Devonian Epizoa. J Paleontol 48:881–894Google Scholar
  76. Thayer CW (1977) Recruitment, growth, and mortality of a living articulate brachiopod, with implications for the interpretation of survivorship curves, pp. 98–109Google Scholar
  77. Tomasovych A, Carlson SJ, Labarbera M (2008) Ontogenetic niche shift in the brachiopod Terebratalia transversa: relationship between the loss of rotation ability and allometric growth. Palaeontology 51:1471–1496CrossRefGoogle Scholar
  78. Webber AJ, Hunda BR (2007) Quantitatively comparing morphological trends to environment in the fossil record (Cincinnatian series; upper Ordovician). Evolution 61:1455–1465CrossRefGoogle Scholar
  79. Webster M, Hughes N (1999) Compaction-related deformation in Cambrian olenelloid trilobites and its implications for fossil morphometry. J Paleontol 73:355–371Google Scholar
  80. Webster M, Zelditch ML (2011) Modularity of a Cambrian ptychoparioid trilobite cranidium. Evol Dev 13:96–109CrossRefGoogle Scholar
  81. Zelditch ML, Lundrigan BL, Garland T (2004) Developmental regulation of skull morphology: ontogenetic dynamics of variance. Evol Dev 6:194–206CrossRefGoogle Scholar

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© Springer-Verlag Berlin Heidelberg 2013

Authors and Affiliations

  1. 1.City College of New YorkNew YorkUSA

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