Skip to main content

Joint Histogram Modelling for Segmentation Multiple Sclerosis Lesions

  • Conference paper
Book cover Computer Vision/Computer Graphics Collaboration Techniques (MIRAGE 2011)

Abstract

This paper presents a novel methodology based on joint histograms, for the automated and unsupervised segmentation of multiple sclerosis (MS) lesion in cranial magnetic resonance (MR) imaging. Our workflow is composed of three steps: locate the MS lesion region in the joint histogram, segment MS lesions, and false positive reduction. The advantage of our approach is that it can segment small lesions, does not require prior skull segmentation, and is robust with regard to noisy and inhomogeneous data. Validation on the BrainWeb simulator and real data demonstrates that our method has an accuracy comparable with other MS lesion segmentation methods.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 54.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 69.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Grimaud, J., Lai, M., Thorpe, J., Adeleine, P., Wang, L., Barker, G.J., Plummer, D.L., Tofts, P.S., McDonald, W.I., Miller, D.H.: Quantification of MRI lesion load in multiple sclerosis: a comparison of three computer-assisted techniques. Magnetic Resonance Imaging 14, 495–505 (1996)

    Article  Google Scholar 

  2. Rouaïnia, M., Medjram, M.S., Doghmane, N.: Brain MRI segmentation and lesions detection by EM algorithm. World Academy of Science. Engineering and Technology 24, 139–142 (2006)

    Google Scholar 

  3. Sajja, B.R., Datta, S., He, R., Mehta, M., Gupta, R.K., Wolinsky, J.S., Narayana, P.A.: Unified approach for multiple sclerosis lesion segmentation on brain MRI. Annales of Biomedical Engineering 34(1), 142–151 (2006)

    Article  Google Scholar 

  4. Shiee, N., Bazin, P.L., Pham, D.L.: Multiple Sclerosis Lesion segmentation using statistical and topological atlases. In: Medical Image Analysis on Multiple Sclerosis(MIAMS) Workshop in MICCAI (2008)

    Google Scholar 

  5. Dugas-Phocion, G., Gonzalez, M.A., Lebrun, C., Chanalet, S., Bensa, C., Malandain, G., Ayache, N.: Hierarchical segmentation of multiple sclerosis lesions in multi-sequence MRI. Biomedical Imaging: Nano to Macro (2004)

    Google Scholar 

  6. Leemput, K.V., Maes, F., Vandermeulen, D., Colchester, A., Suetens, P.: Automated segmentation of multiple sclerosis lesions by model outlier detection. IEEE Transactions on Medical Imaging 20(8), 677–688 (2001)

    Article  Google Scholar 

  7. Aït-Ali, L.S., Prima, S., Hellier, P., Carsin, B., Edan, G., Barillot, C.: STREM: A robust multidimensional parametric method to segment MS lesions in MRI. In: Duncan, J.S., Gerig, G. (eds.) MICCAI 2005. LNCS, vol. 3749, pp. 409–416. Springer, Heidelberg (2005)

    Chapter  Google Scholar 

  8. Iannucci, G., Minicucci, L., Rodegher, M., Sormani, M.P., Comi, G., Filippi, M.: Correlations between clinical and MRI involvement in multiole sclerosis assessment using T1, T2 and MT histograms. Journal of the Neurological Sciences 171, 121–129 (1999)

    Article  Google Scholar 

  9. Wang, W.H., Feng, Q.J., Liu, L., Chen, W.F.: Segmentation of brain MR images through class-adaptive Gauss-Markov random field model and the EM algorithm. Journal of Image and Graphics 13(3), 488–493 (2008)

    Google Scholar 

  10. Li, C.M., Kao, C.Y., John, C., Ding, Z.H.: Minimization of Region-Scalable Fitting Energy for Image Segmentation. IEEE Trans. Image Processing 17(10), 1940–1949 (2008)

    Article  MathSciNet  Google Scholar 

  11. Chan, T.F., Esedoglu, S., Nikolova, M.: Algorithms for finding global minimizers of denoising and segmentation models. SIAM Journal on Applied Mathematics 66, 1632–1648 (2006)

    Article  MathSciNet  MATH  Google Scholar 

  12. Goldstein, T., Bresson, X., Osher, S.: Geometric Applications of the Split Bregman Method: Segmentation and Surface Reconstruction. Journal of Scientific Computing 45, 272–293 (2010)

    Article  MathSciNet  MATH  Google Scholar 

  13. Wang, W.H., Feng, Q.J., Chen, W.F.: Active contour based on Region-scalable fitting energy. To be Presented at Chinese Journal of Computers (2011)

    Google Scholar 

  14. Bresson, X., Esedoglu, S., Vandergheynst, P., Thiran, J., Osher, S.: Fast Global Minimization of the Active Contour/Snake Model. Journal of Mathematical Imaging and Vision 28, 151–167 (2007)

    Article  MathSciNet  Google Scholar 

  15. Yang, Y.Y., Li, C.M., Kao, C.Y., Osher, S.: Split Bregman Method for Minimization of Region-Scalable Fitting Energy for Image Segmentation. In: Bebis, G., Boyle, R., Parvin, B., Koracin, D., Chung, R., Hammound, R., Hussain, M., Kar-Han, T., Crawfis, R., Thalmann, D., Kao, D., Avila, L. (eds.) ISVC 2010. LNCS, vol. 6454, pp. 117–128. Springer, Heidelberg (2010)

    Chapter  Google Scholar 

  16. Brain Web. Montreal Neurological Institute, McGill University (2006), http://www.bic.mni.mcgill.ca/brainweb/

  17. spm99 (2000), http://www.fil.ion.ucl.ac.uk/spm/

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2011 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Zeng, Z., Zwiggelaar, R. (2011). Joint Histogram Modelling for Segmentation Multiple Sclerosis Lesions. In: Gagalowicz, A., Philips, W. (eds) Computer Vision/Computer Graphics Collaboration Techniques. MIRAGE 2011. Lecture Notes in Computer Science, vol 6930. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-24136-9_12

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-24136-9_12

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-24135-2

  • Online ISBN: 978-3-642-24136-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics