Summary
Since the discovery of the diffraction barrier in the nineteenth century, it has been commonly accepted that a lens-based (far-field) optical microscope cannot discern structural details much finer than about half the wavelength of light (λ ∕ 2). However, in the early 1990s, a quest toward higher resolution began, which led to the discovery that the diffraction barrier of far-field fluorescence microscopy can be radically overcome using basic molecular transitions. This chapter discusses the initial and more recent concepts that can provide far-field optical resolution down to the molecular scale. It is shown that all concepts reported to date exploit a transition between a bright and a dark state to switch fluorescence such that adjacent objects or molecules emit sequentially in time. Some of these concepts can be extended to signal-giving mechanisms other than fluorescence. Likewise, purely physics-based concepts, such as stimulated emission depletion (STED) microscopy, can in principle be extended to explore the molecule itself. Emergent far-field fluorescence nanoscopy will strongly impact not only the life sciences but also other areas that benefit from nanoscale optical three-dimensional (3D) mapping with conventional lenses and propagating light.
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References
E. Abbe, Beiträge zur Theorie des Mikroskops und der mikroskopischen Wahrnehmung. Arch. Mikr. Anat. 9, 413–468 (1873)
B. Alberts et al., Molecular Biology of the Cell. 4 edn. (Garland Science, New York, 2002)
M. Born, E. Wolf, Principles of Optics. 7th edn. (Cambridge University Press, Cambridge, New York, Melbourne, Madrid, Cape Town, 2002), p. 952
E.H. Synge, A suggested method for extending microscopic resolution into the ultra-microscopic region. Philos. Mag. 6, 356 (1928)
E.A. Ash, G. Nichols, Super-resolution aperture scanning microscope. Nature 237 510–512 (1972)
D.W. Pohl, W. Denk, M. Lanz, Optical stethoscopy: Image recording with resolution λ ∕ 20. Appl. Phys. Lett. 44, 651–653 (1984)
A. Lewis et al., Development of a 500 A Resolution Light Microscope. Ultramicroscopy 13, 227–231 (1984)
J.B. Pendry, Negative refraction makes a perfect lens. Phys. Rev. Lett. 85(18), 3966–3969 (2000)
Z. Liu et al., Far-field optical hyperlens magnifying sub-diffraction-limited objects. Science 315(5819), 1686 (2007)
I.I. Smolyaninov, Y.-J. Hung, C.C. Davis, Magnifying superlens in the visible frequency range. Science 315(5819), 1699–1701 (2007)
V.A. Podolskiy, E.E. Narimanov, Near-sighted superlens. Opt. Lett. 30, 75–78 (2005)
G. Toraldo di Francia, Supergain antennas and optical resolving power. Nuovo Cimento Suppl. 9, 426–435 (1952)
W. Lukosz, Optical systems with resolving powers exceeding the classical limit. J. Opt. Soc. Am. 56, 1463–1472 (1966)
C. Cremer, T. Cremer, Considerations on a laser-scanning-microscope with high resolution and depth of field. Microscopica Acta 81(1), 31–44 (1978)
M. Minsky, Microscopy Apparatus. US Patent, 3,013,467 (1961)
T. Wilson, C.J.R. Sheppard, Theory and Practice of Scanning Optical Microscopy (Academic, New York, 1984)
J.B. Pawley, Handbook of Biological Confocal Microscopy, 2nd edn. (Springer, New York, 2006), p. 700
N. Bloembergen, Nonlinear Optics (Benjamin, New York, 1965)
C.J.R. Sheppard, R. Kompfner, Resonant scanning optical microscope. Appl. Optics 17, 2879–2882 (1978)
W. Denk, J.H. Strickler, W.W. Webb, Two-photon laser scanning fluorescence microscopy. Science 248, 73–76 (1990)
A. Schönle, S.W. Hell, Far-field fluorescence microscopy with repetetive excitation. Eur. Phys. J. D 6, 283–290 (1999)
M. Bertero, et al., Three-dimensional image restoration and super-resolution in fluorescence confocal microscopy. J. Microsc. 157, 3–20 (1990)
J.-A. Conchello, J.G. McNally, Fast regularization technique for expectation maximization alogorithm for optical sectioning microscopy. SPIE Proc. 2655, 199–208 (1996)
D.H. Burns et al., Strategies for attaining superresolution using spectroscopic data as constraints. Appl. Optics 24(2), 154–160 (1985)
D.W. Pohl, D. Courjon, Near Field Optics (Kluwer, Dordrecht, 1993)
D.W. Pohl, Near-field optics: comeback of light in microscopy. Solid State Phenom. 63–64, 252–256 (1998)
E. Betzig et al., Near-field fluorescence imaging of cytoskeletal actin. Bioimaging 1, 129–136 (1993)
A. Kirsch, C. Meyer, T.M. Jovin, Integrating of optical techniques in scanning probe microscopes; The scanning near-field optical microscope (SNOM), in Analytical Use of Fluorescenct Probes in Oncology, ed. by E. Kohen, J.G. Hirschberg (Plenum, New York, 1996), pp. 317–323
L. Novotny, B. Hecht, Principles of Nano-Optics (Cambridge University Press, Cambridge, MA, 2006)
R.Y. Tsien, The green fluorescent protein. Annu. Rev. Biochem. 67(1), pp. 509–544 (1998)
R.Y. Tsien, Imagining imaging’s future. Nat. Cell Biol. SS16–SS21 (2003)
S.W. Hell, Double-Scanning Confocal Microscope. European Patent, 0491289 (1990/1992)
S. Hell, E.H.K. Stelzer, Fundamental improvement of resolution with a 4Pi-confocal fluorescence microscope using two-photon excitation. Opt. Commun. 93, 277–282 (1992)
S.W. Hell, Improvement of lateral resolution in far-field light microscopy using two-photon excitation with offset beams. Opt. Commun. 106, 19–24 (1994)
S.W. Hell, J. Wichmann, Breaking the diffraction resolution limit by stimulated emission: stimulated emission depletion microscopy. Opt. Lett. 19(11), 780–782 (1994)
S.W. Hell, M. Kroug, Ground-state depletion fluorescence microscopy, a concept for breaking the diffraction resolution limit. Appl. Phys. B 60, 495–497 (1995)
A. Schönle, P.E. Hänninen, S.W. Hell, Nonlinear fluorescence through intermolecular energy transfer and resolution increase in fluorescence microscopy. Ann. Phys. (Leipzig), 8(2), 115–133 (1999)
S.W. Hell, S. Jakobs, L. Kastrup, Imaging and writing at the nanoscale with focused visible light through saturable optical transitions. Appl. Phys. A 77, 859–860 (2003)
S.W. Hell, Toward fluorescence nanoscopy. Nature Biotechnol. 21(11), 1347–1355 (2003)
S.W. Hell, M. Dyba, S. Jakobs, Concepts for nanoscale resolution in fluorescence microscopy. Curr. Opin. Neurobio. 14(5), 599–609 (2004)
S.W. Hell, Strategy for far-field optical imaging and writing without diffraction limit. Phys. Lett. A 326(1–2), 140–145 (2004)
M. Hofmann et al., Breaking the diffraction barrier in fluorescence microscopy at low light intensities by using reversibly photoswitchable proteins. Proc. Natl. Acad. Sci. USA 102(49), 17565–17569 (2005)
E. Betzig et al., Imaging Intracellular Fluorescent Proteins at Nanometer Resolution. Science 313(5793), 1642–1645 (2006)
M.J. Rust, M. Bates, X. Zhuang, Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM). Nat. Meth. 3, 793–796 (2006)
S.T. Hess, T.P.K. Girirajan, M.D. Mason, Ultra-high resolution imaging by fluorescence photoactivation localization microscopy. Biophys. J. 91(11), 4258–4272 (2006)
S. Hell, E.H.K. Stelzer, Properties of a 4Pi-confocal fluorescence microscope. J. Opt. Soc. Am. A 9, 2159–2166 (1992)
M.G.L. Gustafsson, D.A. Agard, J.W. Sedat, Sevenfold improvement of axial resolution in 3D widefield microscopy using two objective lenses. Proc. SPIE 2412, 147–156 (1995)
M. Schrader, S.W. Hell, 4Pi-confocal images with axial superresolution. J. Microsc. 183, 189–193 (1996)
M. Nagorni, S.W. Hell, Coherent use of opposing lenses for axial resolution increase in fluorescence microscopy. I. Comparative study of concepts. J. Opt. Soc. Am. A 18(1), 36–48 (2001)
P.E. Hänninen et al., Two-photon excitation 4pi confocal microscope: Enhanced axial resolution microscope for biological research. Appl. Phys. Lett. 66, 1698–1700 (1995)
S.W. Hell, M. Schrader, H.T.M. van der Voort, Far-field fluorescence microscopy with three-dimensional resolution in the 100 nm range. J. Microsc. 185(1), 1–5 (1997)
M. Schrader et al., 4Pi-confocal imaging in fixed biological specimens. Biophys. J. 75, 1659–1668 (1998)
M. Nagorni, S.W. Hell, 4Pi-confocal microscopy provides three-dimensional images of the microtubule network with 100- to 150-nm resolution. J. Struct. Biol. 123, 236–247 (1998)
A. Egner, S. Jakobs, S.W. Hell, Fast 100-nm resolution 3D-microscope reveals structural plasticity of mitochondria in live yeast. Proc. Nat. Acad. Sci. U.S.A 99, 3370–3375 (2002)
A. Egner et al., 4Pi-microscopy of the Golgi apparatus in live mammalian cells. J. Struct. Biol. 147(1), 70–76 (2004)
H. Gugel et al., Cooperative 4Pi excitation and detection yields 7-fold sharper optical sections in live cell microscopy. Biophys. J. 87, 4146–4152 (2004)
J. Bewersdorf, B.T. Bennett, K.L. Knight, H2AX chromatin structures and their response to DNA damage revealed by 4Pi microscopy. Proc. Natl. Acad Sci. USA 103, 18137–18142 (2006)
A. Egner, S.W. Hell, Fluorescence microscopy with super-resolved optical sections. Trends Cell Biol. 15(4), 207–215 (2005)
M. Lang et al., 4Pi microscopy of type A with 1-photon excitation in biological fluorescence imaging. Opt. Expr. 15(5), 2459–2467 (2007)
M. Lang, J. Engelhardt, S.W. Hell, 4Pi microscopy with linear fluorescence excitation. Opt. Lett. 32(3), 259–261 (2007)
M.C. Lang et al., 4Pi microscopy with negligible sidelobes. New J. Phys. 10, 1–13 (2008)
M.G. Gustafsson, D.A. Agard, J.W. Sedat. 3D widefield microscopy with two objective lenses: experimental verification of improved axial resolution, in Three-Dimensional Microscopy: Image Acquisition and Processing III, Proceedings of SPIE, 1996
M.G.L. Gustafsson, D.A. Agard, J.W. Sedat, I5M: 3D widefield light microscopy with better than 100 nm axial resolution. J. Microsc. 195, 10–16 (1999)
B. Bailey et al., Enhancement of axial resolution in fluorescence microscopy by standing-wave excitation. Nature 366, 44–48 (1993)
R. Freimann, S. Pentz, H. Hörler, Development of a standing-wave fluorescence microscope with high nodal plane flatness. J. Microsc. 187(3), 193–200 (1997)
M. Nagorni, S.W. Hell, Coherent use of opposing lenses for axial resolution increase in fluorescence microscopy. II. Power and limitation of nonlinear image restoration. J. Opt. Soc. Am. A 18(1), 49–54 (2001)
J. Bewersdorf, R. Schmidt, S.W. Hell, Comparison of I5M and 4Pi-microscopy. J. Microsc. 222, 105–117 (2006)
S.W. Hell, Far-field optical nanoscopy. Science 316(5828), 1153–1158 (2007)
V. Westphal, S.W. Hell, Nanoscale resolution in the focal plane of an optical microscope. Phys. Rev. Lett. 94, 143903 (2005)
B. Harke et al., Resolution scaling in STED microscopy. Opt. Expr. 16(6), 4154–4162 (2008)
R. Heintzmann, T.M. Jovin, C. Cremer, Saturated patterned excitation microscopy – A concept for optical resolution improvement. J. Opt. Soc. Am. A 19(8), 1599–1609 (2002)
M.G.L. Gustafsson, Nonlinear structured-illumination microscopy: Wide-field fluorescence imaging with theoretically unlimited resolution. Proc. Nat. Acad. Sci. U.S.A 102(37), 13081–13086 (2005)
S.W. Hell, A. Schönle, Nanoscale resolution in far-field fluorescence microscopy, in Science of Microscopy, S.J.C.H., ed. by P.W. Hawkes (Springer, New York, 2007), p. 790–834
C. Eggeling et al., Direct observation of the nanoscale dynamics of membrane lipids in a living cell. Nature, doi:10.1038/nature07596 (2008)
S.W. Hell, Increasing the resolution of far-field fluorescence light microscopy by point-spread-function engineering, in Topics in Fluorescence Spectroscopy, ed. by J.R. Lakowicz (Plenum, New York, 1997), p. 361–422
T.A. Klar, S.W. Hell, Subdiffraction resolution in far-field fluorescence microscopy. Opt. Lett. 24(14), 954–956 (1999)
T.A. Klar et al., Fluorescence microscopy with diffraction resolution limit broken by stimulated emission. Proc. Nat. Acad. Sci. U.S.A 97, 8206–8210 (2000)
T.A. Klar, E. Engel, S.W. Hell, Breaking Abbe’s diffraction resolution limit in fluorescence microscopy with stimulated emission depletion beams of various shapes. Phys. Rev. E 64, 066613, 1–9 (2001)
W. Denk, Two-photon excitation in functional biological imaging. J. Biomed. Opt. 1, 296–304 (1996)
K.I. Willig et al., STED microscopy with continuous wave beams. Nat. Meth. 4(11), 915–918 (2007)
V. Westphal, L. Kastrup, S.W. Hell, Lateral resolution of 28 nm (λ ∕ 25) in far-field fluorescence microscopy. Appl. Phys. B 77(4), 377–380 (2003)
F. Meinecke, Stimulierte Emission im Fluoreszenzmikroskop: Das STED Konzept zur Überwindung der Abbeschen Beugungsgrenze (Diplomarbeit, Ruprecht Karls Universität, Heidelberg, 1996)
M. Dyba, S.W. Hell, Focal spots of size λ ∕ 23 open up far-field fluorescence microscopy at 33 nm axial resolution. Phys. Rev. Lett. 88, 163901 (2002)
M. Dyba, S. Jakobs, S.W. Hell, Immunofluorescence stimulated emission depletion microscopy. Nat. Biotechnol. 21(11), 1303–1304 (2003)
G. Donnert et al., Macromolecular-scale resolution in biological fluorescence microscopy. Proc. Natl. Acad. Sci. USA 103(31), 11440–11445 (2006)
D. Wildanger et al., STED microscopy with a supercontinuum laser source. Opt. Expr. 16(13), 9614–9621 (2008)
R. Schmidt et al., Spherical nanosized spot unravel the interior of cells. Nat. Meth. 4(1), 81–86 (2008)
J. Keller, A. Schönle, S.W. Hell, Efficient fluorescence inhibition patterns for RESOLFT microscopy. Opt. Express 15(6), 3361–3371 (2007)
K.I. Willig et al., STED-microscopy reveals that synaptotagmin remains clustered after synaptic vesicle exocytosis. Nature 440(7086), 935–939 (2006)
R.J. Kittel et al., Bruchpilot promotes active zone assembly, Ca2 + -channel clustering, and vesicle release. Science 312, 1051–1054 (2006)
J.J. Sieber et al., The SNARE-motif is essential for the formation of syntaxin clusters in the plasma membrane. Biophys. J. 90, 2843–2851 (2006)
R. Kellner et al., Nanoscale organization of nicotinic acetylcholine receptors revealed by STED microscopy. Neuroscience 144(1), 135–143 (2007)
V. Westphal et al., Dynamic far-field fluorescence nanoscopy. New J. Phys. 9, 435 (2007)
V. Westphal et al., Video-rate far-field optical nanoscopy dissects synaptic vesicle movement. Science 320(5873), 246–249 (2008)
L. Kastrup et al., Fluorescence fluctuation spectroscopy in subdiffraction focal volumes. Phys. Rev. Lett. 94, 178104 (2005)
B. Hein, K. Willig, S.W. Hell, Stimulated emission depletion (STED) nanoscopy of a fluorescent protein – labeled organelle inside a living cell. Proc Natl Acad Sci U S A 105(38), 14271–14276 (2008)
V.U. Nägerl et al., Live-cell imaging of dendritic spines by STED microscopy. Proc. Natl. Acad Sci. USA 105(48), 18982–18987 (2008)
K. Willig et al., STED microscopy resolves nanoparticle assemblies. New J. Phys. 8, 106 (2006)
B. Harke et al., Three-dimensional nanoscopy of colloidal crystals. Nano Lett. 8(5), 1309–1313 (2008)
E. Rittweger et al., STED microscopy reveals color centers with nanometric resolution. Submitted (2009).
G. Balasubramanian et al., Nanoscale imaging magnetometry with diamond spins under ambient conditions. Nature 455, 648–651 (2008)
J.R. Maze et al., Nanoscale magnetic sensing with an individual electronic spin in diamond. Nature 455, 644–647 (2008)
C.C. Fu et al., Characterization and application of single fluorescent nanodiamonds as cellular biomarkers. Proc. Nat. Acad. Sci. U.S.A. 104(3), 727–732 (2007)
J.I. Chao et al., Nanometer-sized diamond particle as a probe for biolabeling. Biophysical J. 93(6), 2199–2208 (2007)
S. Bretschneider, C. Eggeling, S.W. Hell, Breaking the diffraction barrier in fluorescence microscopy by optical shelving. Phys. Rev. Lett. 98, 218103 (2007)
K.A. Lukyanov et al., Natural animal coloration can be determined by a nonfluorescent green fluorescent protein homolog. J. Biol. Chem. 275(34), 25879–25882 (2000)
R. Ando, H. Mizuno, A. Miyawaki, Regulated fast nucleocytoplasmic shuttling observed by reversible protein highlighting. Science. 306(5700), 1370–1373 (2004)
O. Haeberle, Kindling molecules: a new way to ‘break’ the Abbe limit. C.R. Physique 5, 143–148 (2004)
W. Heisenberg, The Physical Principles of the Quantum Theory (Chicago University Press, Chicago, 1930)
N. Bobroff, Position measurement with a resolution and noise-limited instrument. Rev. Sci. Instrum. 57(6), 1152–1157 (1986)
M.P. Gordon, T. Ha, P.R. Selvin, Single-molecule high-resolution imaging with photobleaching. Proc. Natl. Acad Sci. U S A 101, 6462–6465 (2004)
X. Qu et al., Nanometer-localized multiple single-molecule fluorescence microscopy. Proc. Natl. Acad. Sci. USA 101(31), 11298–11303 (2004)
H.F. Hess, E. Betzig, Optical microscopy with phototransformable labels. Patent Appl, WO 2006/127692 A2 (2005/2006)
S.W. Hell, Verfahren und Fluoreszenzlichtmikroskop zum räumlich hochauflösenden Abbilden einer Struktur einer Probe. German Patent, DE 10 2006 021 317 (2006/2007)
M. Bates et al., Multicolor super-resolution imaging with photo-switchable fluorescent probes. Science 317, 1749–1753 (2007)
J. Fölling et al., Photochromic rhodamines provide nanoscopy with optical sectioning. Angew. Chem. Int. Ed. 46, 6266–6270 (2007)
H. Bock et al., Two-color far-field fluorescence nanoscopy based on photoswitching emitters. Appl. Phys. B 88, 161–165 (2007)
C. Geisler et al., Resolution of λ ∕ 10 in fluorescence microscopy using fast single molecule photo-switching. Appl. Phys. A 88(2), 223–226 (2007)
A. Egner et al., Fluorescence nanoscopy in whole cells by asnychronous localization of photoswitching emitters. Biophys. J. 93, 3285–3290 (2007)
B. Huang et al., Three-dimensional super-resolution imaging by stochastic optical reconstruction microscopy. Science 319, 810–813 (2008)
H. Shroff et al., Live-cell photoactivated localization microscopy of nanoscale adhesion dynamics. Nat. Meth. 5(5), 417–423 (2008)
H. Shroff et al., Dual-color superresolution imaging of genetically expressed probes within individual adhesion complexes. Proc. Nat Acad. Sci. U.S.A. 104(51), 20308–20313 (2007)
J. Fölling et al., Fluorescence nanoscopy by ground-state depletion and single-molecule return. Nat. Meth. 5, 943–945 (2008)
M. Bossi et al., Multi-color far-field fluorescence nanoscopy through isolated detection of distinct molecular species. Nano Lett. 8(8), 2463–2468 (2008)
S. Weiss, Fluorescence spectroscopy of single biomolecules. Science 283, 1676–1683 (1999)
A. Yildiz et al., Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization. Science 300(5628), 2061–2065 (2003)
A.M. van Oijen et al., Far-field fluorescence microscopy beyond the diffraction limit. J. Opt. Soc. Am. A 16(4), 909–915 (1999)
E. Betzig, Proposed method for molecular optical imaging. Opt. Lett. 20(3), 237–239 (1995)
K.A. Lidke et al., Superresolution by localization of quantum dots using blinking statistics. Opt. Expr. 13(18), 7052–7062 (2005)
S.W. Hell, J. Soukka, P.E. Hänninen, Two- and multiphoton detection as an imaging mode and means of increasing the resolution in far-field light microscopy. Bioimaging 3, 65–69 (1995)
J. Fölling et al., Fluorescence nanoscopy with optical sectioning by two-photon induced molecular switching using continuous-wave lasers. Chem. Phys. Chem. 9, 321–326 (2008)
M.F. Juette et al., Three-dimensional sub-100 nm resolution fluorescence microscopy of thick samples. Nat. Meth. 5(6), 527–529 (2008)
C.V. Middendorff et al., Isotropic 3D Nanoscopy based on single emitter switching. Opt. Expr. 16(25), 20774–20788 (2008)
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Hell, S.W. (2010). Far-Field Optical Nanoscopy. In: Gräslund, A., Rigler, R., Widengren, J. (eds) Single Molecule Spectroscopy in Chemistry, Physics and Biology. Springer Series in Chemical Physics, vol 96. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-02597-6_19
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