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Computational Infrastructure for Parallel, Distributed, and Grid-Based Monte Carlo Computations

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Book cover Large-Scale Scientific Computing (LSSC 2003)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 2907))

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Abstract

Monte Carlo applications are widely perceived as computationally intensive but naturally parallel. Therefore, they can be effectively executed using the dynamic bag-of-work model which is well suited to parallel, distributed, and grid-based architectures. This paper concentrates on providing computational infrastructure for Monte Carlo applications on such architectures. This is accomplished by analyzing the characteristics of large-scale Monte Carlo computations, and leveraging the existing Scalable Parallel Random Number Generators (SPRNG) library. Based on these analyses, we improve the efficiency of subtask-scheduling by implementing and analyzing the ”N-out-of-M” strategy, and develop a Monte Carlo-specific lightweight checkpointing technique, which leads to a performance improvement. Also, we enhance the trustworthiness of Monte Carlo applications on these architectures by utilizing the statistical nature of Monte Carlo and by cryptographically validating intermediate results utilizing the random number generator already in use in the Monte Carlo application. All these techniques lead to a high-performance grid-computing infrastructure that is capable of providing trustworthy Monte Carlo computation services.

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References

  1. Foster, I., Kesselman, C., Tueske, S.: The Anatomy of the Grid. International Journal of Supercomputer Applications 15(3), 1–25 (2001)

    Article  Google Scholar 

  2. Litzkow, M., Livny, M., Mutka, M.: Condor–A Hunter of Idle Workstations. In: Proceedings of the 8th International Conference of Distributed Computing Systems, pp. 104–111 (1998)

    Google Scholar 

  3. Beck, M., Dongarra, J., Fagg, G., Geist, A., Gray, P., Kohl, J., Migliardi, M., Moore, K., Moore, T., Papadopoulous, P., Scott, S., Sunderam, V.: HARNESS: A Next Generation Distributed Virtual Machine. Journal of Future Generation Computer Systems 15(5/6), 571–582 (1999)

    Article  Google Scholar 

  4. Christiansen, B.O., Cappello, P., Ionescu, M.F., Neary, M.O., Schauser, K.E., Wu, D.: Javelin: Internet-Based Parallel Computing Using Java. Concurrency: Practice and Experience 9(11), 1139–1160 (1997)

    Article  Google Scholar 

  5. Foster, I., Kesselman, C.: Globus: A Mmetacomputing Infrastructure Toolkit. International Journal of Supercomputer Applications 11(2), 115–128 (1997)

    Article  Google Scholar 

  6. Srinivasan, A., Ceperley, D.M., Mascagni, M.: Random Number Generators for Parallel Applications. Monte Carlo Methods in Chemical Physics 105, 13–36 (1997)

    Google Scholar 

  7. Entropia website: http://www.entropia.com

  8. XML website: http://www.xml.org

  9. Korpela, E., Werthimer, D., Anderson, D., Cobb, J., Lebofsky, M.: SETI@home- Massively Distributed Computing for SETI. Computing in Science and Engineering 3(1), 78–83 (2001)

    Article  Google Scholar 

  10. Aktouf, C., Benkahla, O., Robach, C., Guran, A.: Basic Concepts & Advances in Fault-Tolerant Computing Design. World Scientific Publishing Company, Singapore (1998)

    Google Scholar 

  11. Mascagni, M., Srinivasan, A.: Algorithm 806: SPRNG: A Scalable Library for Pseudorandom Number Generation. ACM Transactions on Mathematical Software 26, 436–461 (2000)

    Article  Google Scholar 

  12. Livny, M., Basney, J., Raman, R., Tannenbaum, T.: Mechanisms for High Throughput Computing. SPEEDUP Journal 11(1) (1997)

    Google Scholar 

  13. SPRNG website: http://sprng.cs.fsu.edu

  14. Condor website: http://www.cs.wisc.edu/condor

  15. Buyya, R., Chapin, S., DiNucci, D.: Architectural Models for Resource Management in the Grid. In: Buyya, R., Baker, M. (eds.) GRID 2000. LNCS, vol. 1971, pp. 18–35. Springer, Heidelberg (2000)

    Chapter  Google Scholar 

  16. Sarmenta, L.F.G.: Sabotage-Tolerance Mechanisms for Volunteer Computing Systems. In: Proceedings of ACM/IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2001), pp. 561–572 (2001)

    Google Scholar 

  17. Li, Y., Mascagni, M., Peters, M.H.: Grid-based Nonequilibrium Multiple-Time Scale Molecular Dynamics/Brownian Dynamics Simulations of Ligand-Receptor Interactions in Structured Protein Systems. In: Proceedings of the First BioGrid Workshop at the 3rd IEEE/ACM Symposium Cluster Computing and the Grid, pp. 568–573 (2003)

    Google Scholar 

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Mascagni, M., Li, Y. (2004). Computational Infrastructure for Parallel, Distributed, and Grid-Based Monte Carlo Computations. In: Lirkov, I., Margenov, S., Waśniewski, J., Yalamov, P. (eds) Large-Scale Scientific Computing. LSSC 2003. Lecture Notes in Computer Science, vol 2907. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-24588-9_4

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  • DOI: https://doi.org/10.1007/978-3-540-24588-9_4

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-21090-0

  • Online ISBN: 978-3-540-24588-9

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