Abstract
Immunochemical analysis for environmental monitoring is so far predominantly based on antibodies derived from sera and hybridoma cultures. This conventional technology will be supported or even replaced in the near future by the recombinant antibody (Rab) approach, since Rab are accessible to precise modification of antibody properties by virtue of genetic engineering. Furthermore, the in vitro generation of Rab libraries bearing an antibody diversity comparable to the vertebrate immune repertoire paves the way to substitute animals as the antibody source of choice. Utilising the s-triazine herbicides as target molecules, various strategies for the synthesis of Rab libraries are presented comprising natural, semisynthetic and synthetic antibody genes. The Rab genes are expressed as fusion proteins at the surface of phage particles. Special attention is given to the establishment of an efficient selection procedure. Phages presenting specific Rab are isolated via immuno affinity chromatography employing s-triazine coated beads. The described libraries are designed as a gene pool to provide an array of antibody variants for future immunosensor applications in environmental analysis.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Ayala, M., Balint, R.F., Fernandez de Cossio, L., Canaan Haden, J.W., Larrick, J.W., Gavilondo, J.V. (1995): Variable region sequence modulates periplasmic export of a single-chain Fv antibody fragment in Escherichia coli. Biotechniques 18, 832, 835–8, 840–2.
Ayyagari, M.S., Pande, R., Kamtekar, S., Gao, H., Marx, K.A., Kumar, J., Tripathy, S.K., Akkara, J.A., Kaplan, D.L. (1995): Molecular assembly of proteins and conjugated polymers: Toward development of biosensors. Biotechnology & Bioengineering 45, 116–121.
Barbas, C.F., Burton, D.R. (1996): Selection and evolution of high-affinity human anti-viral antibodies. TibTech 14, 230–234.
Barbas, C.F., Hu, D., Dunlop, N., Sawyer, L., Cababa, D., Hendry, R.M., Nara, P.L., Burton, D.R. (1994): In vitro evolution of a neutralizing human antibody to human immunodefiency virus type 1 to enhance affinity and broaden strain cross-reactivity. Proc. Natl. Acad. Sci. USA 91, 3809–3813.
Better, M., Chang, C.P., Robinson, R.R., Horwitz, A.H. (1988): Escherichia coli secretion of an active chimeric antibody fragment. Science 240, 1041–1043.
Cheskis, B., Freedman, L.P. (1996): Modulation of nuclear receptor interactions by ligands: Kinetic analysis using surface plasmon resonance. Biochemistry 35, 3309–3318.
Chothia, C., Lesk, A.M. (1987): Canonical structures for the hypervariable regions of immunoglobulins. J. Mol. Biol. 196, 901–917.
Chothia, C., Lesk, A.M., Gherardi, E., Tomlinson, I.A., Walter, G., Marks, J.D., Llewelyn, M.B., Winter, G. (1992): Structural repertoire of the human VH segments. J. Mol. Biol. 227, 799–817.
Chothia, C., Lesk, A.M., Tramontano, A., Levitt, M., Smith-Gill, S.J., Air, G., Sheriff, S., Padlan, E.A., Davies, D., Tulip, W.R., Colman, P.M., Spinelli, S, Alzari, P.M., Poljak, R.J. (1989): Conformations of immunoglobulin hypervariable regions. Nature 342, 877–883.
Duenas, M., Ayala, M., Vazquez, J., Ohlin, M., Soderlind, E., Borrebaeck, C.A.K., Gavilondo, J.V. (1995): A point mutation in a murine immunoglobulin V-region strongly influences the antibody yield in escherichia coli. Gene 158, 61–66.
Cox, J.P., Tomlinson, I.M., Winter, G. (1994): A directory of human germ-line V kappa segments reveals a strong bias in their usage. Eur. J. Immunol. 24, 827–836.
Graham, B.M., Porter, A.J.R., Harris, W.J. (1995): Cloning, expression and characterisation of a single-chain antibody fragment to the herbicide paraquate. J. Chem. Technol. Biotechnol. 63 279–289.
Gram, H., Marconi, L.-A., Barbas, C.F., Collet, T.A., Lerner, R.A., Kang, A.S. (1992): In vitro selection and affinity maturation of antibodies from naive combinatorial immunoglobulin library. Proc. Natl. Acad. Sci. USA 89, 3576–3580.
Hawkins, R.E., Russell, S.J., Winter, G. (1992): Selection of phage antibodies by binding affinity: Mimicking affinity maturation. J. Mol. Biol. 226, 889–896.
Hernan, R.A., Hui, H.L., Andracki, M.E., Noble, R.W., Sligar, S.G., Walder, J.A., Walder, R.Y. (1992): Human hemoglobin expression in Escherichia coli: Importance of optimal codon usage. Biochemistry 31, 8619–8628.
Hörsch, S., Pleiss, J., Kramer, K., Schmid, R.D. (1996): K411B, a triazine-binding single-chain antibody: Structure modelling and hapten docking. 10th Spring-Workshop “Molecular Modelling”, Darmstadt, Germany.
Kamps-Holtzapple, C., Stanker, L.H. (1996): Development of recombinant single-chain variable portion recognizing potato glycoalkaloids, p. 485–499. In: Immunoassays for residue analysis (Beier, R.C., Stanker, L.H., eds.). ACS Symposium Series 621.
Kang, A.S., Barbas, C.F., Janda, K.D., Benkovic, S.J., Lerner, R.A. (1991): Linkage of recognition and replication functions by assembling combinatorial Fab libraries along phage surfaces. Proc. Natl. Acad. Sci. USA 88, 4363.
Karu, A.E., Scholthof, K.-B.G., Zhang, G., Bell, C.W. (1994): Recombinant antibodies to small analytes and prospects for deriving them from synthetic combinatorial libraries. Food Agricult. Immunol. 6, 277–286.
Knappik, A., Plückthun, A. (1995): Engineered turns of a recombinant antibody improve its in vivo folding. Protein Eng. 8, 81–89.
Kramer, K., Giersch, T., Hock, B. (1994): Magnetic bead selection of hybridomas producing pesticide antibodies. Food Agricult. Immunol. 6, 5–16.
Kramer, K., Hock, B. (1995): Rekombinante Antikörper in der Umweltanalytik. Lebensmittel- & Biotechnologie 2, 49–56.
Kramer, K., Hock, B. (1996): Recombinant single-chain antibodies against s-triazines. Food Agricult. Immunol. 8, 97–109.
Kretzschmar, T., Zimmermann, C., Geiser, M. (1995): Selection procedures for nonmatured phage antibodies: A quantitative comparison and optimization strategies. Anal. Biochem. 224, 413–419.
Leung, D.W., Chen, E., Goeddel, D.V. (1989): A method for random mutagenesis of a defined DNA segment using a modified polymerase chain reaction. J. Meth. Cell. Mol. Biol. 1, 11–15.
Marks, J.D., Hoogenboom, H.R., Bonnert, T.P., McCafferty, J., Griffiths, A.D., Winter, G. (1991): By-passing immunization: Human antibodies from V-gene libraries displayed on phage. J. Mol. Biol. 222, 581–597.
McCafferty, J., Griffiths, A.D., Winter, G., Chiswell, D.J. (1990): Phage antibodies: Filamentous phage displaying antibody variable domains. Nature 348, 552.
Minunni, M., Mascini, M., Guilbault, G.G., Hock, B. (1995): The quartz crystal microbalance as biosensor. Anal. Letts. 28, 749–764.
Rainina, E.I., Badalian, I.E., Ignatov, O.V., Fedorov, A.Y., Simonian, A.L., Varfolomeyev, S.D. (1996): Cell biosensor for detection of phenol in aqueous solutions. Appl. Biochem. Biotechnol. 56, 117–127.
Sawyer, J.R., Schlom, J., Kashmiri, S.V. (1994): The effects of induction conditions on production of a soluble anti-tumor sFv in Escherichia coli. Protein Eng. 7, 1401–1406.
Scott, J.K., Smith, G.P. (1990): Searching for peptide ligands with an epitope library. Science 249, 386–390.
Skerra, A., Plückthun, A. (1988): Assembly of a functional immunoglobulin Fv fragment in Escherichia coli. Science 240, 1038–1041.
Smith, G.P. (1985): Filamentous fusion phage: Novel expression vectors that display cloned antigens on the virion surface. Science 228, 1315–1316.
Somerville, J.E., Goshom, S.C., Fell, H.P., Darveau, R.P. (1994): Bacterial aspects associated with the expression of a single-chain antibody fragment in Escherichia coli. Appl. Microbiol. Biotechnol. 42, 595–603.
Tomlinson, I.M., Walter, G., Marks, J.D., Llewelyn, M.B., Winter, G. (1992): The repertoire of human germline VII sequences reveals about fifity groups of VH segments with different hypervariable loops. J. Mol. Biol. 227, 776–798.
Virnekäs, B., Ge, L., Plückthun, A., Schneider, K.C., Wellnhofer, G., Moroney, S.E. (1994): Trinucleotide phosphoramidites: Ideal reagents for the synthesis of mixed oligonucleotides for random mutagenesis. Nucl. Acid. Res. 22, 5600–5607.
Ward, V.K., Schneider, P.G., Kreißig, S.B., Hammock, B.D., Choudary, P.V. (1993): Cloning, Sequencing and expression of the Fab fragment of a monoclonal antibody to the herbicide atrazine. Prot. Eng. 6, 981–988.
Watts, H.J., Yeung, D., Parkes, H. (1995): Real-time detection and quantification of DNA hybridzation by an optical biosensor. Anal. Chem. 67, 4283–4289.
Williams, S.C., Frippiat, J.P., Tomlinson, I.M., Ignatovich, O., Lefranc, M.P., Winter, G. (1996): Sequence and evolution of the human germline V-lambda repertoire. J. Mol. Biol. 264, 220–232.
Winter, G., Griffiths, A.D., Hawkins, R.E., Hoogenboom, H.R. (1994): Making antibodies by phage display technology. Annu. Rev. Immunol. 12, 433–455.
Yang, W.P., Green, K., Pinzsweeney, S., Briones, A.T., Burton, D.R., Barbas, C.F. (1995): CDR walking mutagenesis for the affinity maturation of a potent human anti-HIV-1 antibody into the picomolar range. J. Mol. Biol. 254: 392–403.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 1998 B. G. Teubner Verlagsgesellschaft Leipzig
About this chapter
Cite this chapter
Kramer, K., Knappik, A. (1998). Strategies for Recombinant Antibody Library Synthesis: An Advanced Source for Immunoglobulins in Environmental Analysis. In: Hock, B., Barceló, D., Cammann, K., Hansen, PD., Turner, A.P.F. (eds) Biosensors for Environmental Diagnostics. Teubner-Reihe UMWELT. Vieweg+Teubner Verlag. https://doi.org/10.1007/978-3-322-93454-3_10
Download citation
DOI: https://doi.org/10.1007/978-3-322-93454-3_10
Publisher Name: Vieweg+Teubner Verlag
Print ISBN: 978-3-8154-3540-3
Online ISBN: 978-3-322-93454-3
eBook Packages: Springer Book Archive