Abstract
Apparently featureless ‘flat’ mudflats actually present striking biological patterning beneath the sediment surface, and even slight physical patterning by sediment ripple marks also leads to biological patterning of the surficial biofilm. The more topographically-complex hummock-forming mudflats are characterized by even more striking physical and biological patterning. In this chapter we first consider how the sediment-microbe association resists wave- and current-induced erosion, creating within-sediment structure (microbially-induced sedimentary structures, MISS). These structures may eventually succumb to high-energy erosion, creating superficial irregularity. We then describe how microbial and physical processes conjugate to form the spatially-complex, transitory hummock patterns. Finally, we summarize the biological patterning which emerges from the sedimentary structure and pattern on both flat and hummock mudflats.
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Andersen TJ, Pejrup M (2011) Biological influences on sediment behavior and transport. In: Wolanski E, McLusky DS (eds) Treatise on estuarine and coastal science, vol 2. Academic, Waltham, pp 289–309
Bak P, Tang C, Wiesenfeld K (1987) Self-organized criticality – an explanation of 1/f noise. Phys Rev Lett 59:381–384
Beninger PG, Boldina I (2014) Fine-scale spatial distribution of the temperate infaunal bivalve Tapes (=Ruditapes) philippinarum (Adams and Reeve) on fished and unfished intertidal mudflats. J Exp Mar Biol Ecol 457:128–134
Blanchard G (1990) Overlapping microscale dispersion patterns of meiofauna and rnicrophytobenthos. Mar Ecol Prog Ser 68:101–111
Blanchard GF, Paterson DM, Stal LJ, Richard P, Galois R, Huet V, Kelly J, Honeywill C, de Brouwer J, Dyer K, Christie M, Seguignes M (2000) The effect of geomorphological structures on potential biostabilisation by microphytobenthos on intertidal mudflats. Cont Shelf Res 20:1243–1256
Boldina I, Beninger PG (2013) Fine-scale spatial structure of the exploited infaunal bivalve Cerastoderma edule on the French Atlantic coast. J Sea Res 76:193–200
Boldina I, Beninger PG (2014) Fine-scale spatial distribution of the common lugworm Arenicola marina, and effects of intertidal clam fishing. Estuar Coast Shelf Sci 143:32–40
Boldina I, Beninger PG, Le Coz M (2014) Effect of long-term mechanical perturbation on intertidal soft-bottom meiofunal community spatial structure. J Sea Res 85:85–91
Bruslé J (1981) Food and feeding in grey mullets. In: Oren OH (ed) Aquaculture of grey mullets. Cambridge University Press, Cambridge, pp 185–217
Cady SL, Noffke N (2009) Geobiology: evidence for early life on earth and the search for life on other planets. GSA Today 19:4–10
Carling PA, Williams JJ, Croudace IW, Amos CL (2009) Formation of mud ridge and runnels in the intertidal zone of the Severn Estuary, UK. Cont Shelf Res 29:1913–1926
Carpentier A, Como S, Dupuy C, Lefrançois C, Feunteun E (2014) Feeding ecology of Liza spp. in a tidal flat: evidence of the importance of primary production (biofilm) and associated meiofauna. J Sea Res 92:86–91
Chapman MG (2000) Poor design of behavioural experiments gets poor results: examples from intertidal habitats. J Exp Mar Biol Ecol 250:77–95
Chapman MG, Tolhurst TJ, Murphy RJ, Underwood AJ (2010) Complex and inconsistent patterns of variation in benthos, micro-algae and sediment over multiple spatial scales. Mar Ecol Prog Ser 398:33–47
Cheverie AV, Hamilton DJ, Coffin MRS, Barbeau MA (2014) Effects of shorebird predation and snail abundance on an intertidal mudflat community. J Sea Res 92:102–114
Crosetti D, Cataudella S (1994) The mullets. In: Nash CE (ed) Production of aquatic animals: fishes. Elsevier, Amsterdam, pp 253–268
Cuadrado DG, Carmona NB, Bournod CA (2011) Biostabilization of sediments by microbial mats in a temperate siliciclastic tidal flat Bahía Blanca estuary (Argentina). Sediment Geol 237:95–101
Cuadrado DG, Bournod CN, Pan J, Carmonade NB (2013) Microbially-induced sedimentary structures (MISS) as record of storm action in supratidal modern estuarine setting. Sediment Geol 296:1–8
Cuadrado DG, Perillo GME, Vitale AJ (2014) Modern microbial mats in siliciclastic tidal flats: evolution, structure and the role of hydrodynamics. Mar Geol 352:367–380
de Brouwer JFC, Bjelic S, Deckere E, Stal LJ (2000) Interplay between biology and sedimentology in a mudflat (Biezelingse Ham, Westerschelde, the Netherlands). Cont Shelf Res 20:1159–1177
de los Ríos A, Ascaso C, Wierzchos J (2004) Microstructural characterization of cyanobacterial mats from the McMurdo Ice Shelf, Antarctica. Appl Environ Microbiol 70:569–580
Decho AW (2000) Microbial biofilms in intertidal systems: an overview. Cont Shelf Res 20:1257–1273
Dupuy C, Mallet C, Guizien K, Montanié H, Bréret M, Mornet F, Fontaine C, Nérota C, Orvainf F (2014) Sequential resuspension of biofilm components (viruses, prokaryotes and protists) as measured by erodimetry experiments in the Brouage mudflat (French Atlantic coast). J Sea Res 92:56–65
Eriksson PG, Porada H, Banerjee S, Bouougri E, Sarkar S, Bumby AJ (2007) Mat-destruction features. In: Schieber J, Bose P, Eriksson PG, Banerjee S, Sarkar S, Altermann W, Catuneanu O (eds) Atlas of microbial mat features preserved within the siliciclastic rock record. Elsevier, Amsterdam, pp 76–105
Fang H, Shang Q, Chen M, He G (2014) Changes in the critical erosion velocity for sediment colonized by biofilm. Sedimentology 61:648–659
Fenchel T, Kühl M (2000) Artificial cyanobacterial mats: growth, structure, and vertical zonation patterns. Microb Ecol 40:85–93
Fernández EM, Spetter CV, Martinez A, Cuadrado DG, Avena MJ, Marcovecchio JE (2016) Carbohydrate production by microbial mats communities in tidal flat from Bahía Blanca Estuary (Argentina). Environ Earth Sci 75:641
Findlay SEG (1981) Small-scale spatial distribution of meiofauna on a mud- and sandflat. Estuar Coast Shelf Sci 12:471–484
Findlay SEG (1982) Influence of sampling scale on apparent distribution of meiofauna on a sandflat. Estuaries 5:322–324
Flach EC (1992) Disturbance of benthic infauna by sediment-reworking activities of the lugworm Arenicola marina. Neth J Sea Res 30:81–89
Flach EC, Beukema JJ (1994) Density-governing mechanisms in populations of the lugworm Arenicola marina on tidal flats. Mar Ecol Prog Ser 115:139–149
Flach EC, de Bruin W (1993) Effects of Arenicola marina and Cerastoderma edule on distribution, abundance and population structure of Corophium volutator in Gullmarsfjorden, Western Sweden. Sarsia 78:105–118
Folk RL, Andrews PB, Lewis DW (1970) Detrital sedimentary rock classification and nomenclature for use in New Zealand. N Z J Geol Geophys 13:937–968
Friend PL, Lucas CH, Holligan PM, Collins MB (2008) Microalgal mediation of ripple mobility. Geobiology 6:70–82
Gerdes G (2007) Structures left by modern microbial mats in their host sediments. In: Schieber J, Bose P, Eriksson PG, Banerjee S, Sarkar S, Altermann W, Catuneanu O (eds) Atlas of microbial mat features preserved within the clastic rock record. Elsevier, Amsterdam, pp 5–38
Guichard F, Halpin PM, Allison GW, Lubchenco J, Menge BA (2003) Mussel disturbance dynamics: signatures of oceanographic forcing from local interactions. Am Nat 161:889–904
Hagadorn JW, McDowell C (2012) Microbial influence on erosion, grain transport and bedform genesis in sandy substrates under unidirectional flow. Sedimentology 59:795–808
Hall-Stoodley L, Stoodley P (2002) Developmental regulation of microbial biofilms. Curr Opin Biotechnol 13:228–233
Hall-Stoodley L, Costerton JW, Stoodley P (2004) Bacterial biofilms: from the natural environment to infectious diseases. Nat Rev Microbiol 2:95–108
Hjülstrøm F (1935) Studies of the morphological activity of rivers as illustrated by the river Fyris. Bull Geol Inst Univ Uppsala 25:221–528
Jiménez A, Elner RW, Favaro C, Rickards K, Ydenberg RC (2015) Intertidal biofilm distribution underpins differential tide-following behavior of two sandpiper species (Calidris mauri and Calidris alpina) during northward migration. Estuar Coast Shelf Sci 155:8–16
Jørgensen BB (1994) Diffusion processes and boundary layers in microbial mats. In: Stal LJ, Caumette P (eds) Microbial mats. NATO ASI series (Series G: Ecological sciences), vol 35. Springer, Berlin
Kaźmierczak J, Fenchel T, Kühl M, Kempe S, Kremer B, Łącka B, Małkowski K (2015) CaCO3 precipitation in multilayered cyanobacterial mats: clues to explain the alternation of micrite and sparite layers in calcareous stromatolites. Life 5:744–769
Krumbein WE (1979) Photolithotrophic and chemoorganotrophic activity of bacteria and algae as related to beach rock formation and degradation (Gulf of Aqaba, Sinai). Geomicrobiol J 1:139–203
Lanuru M, Riethmüller R, Bernem C, Heymann K (2007) The effect of bedforms (crest and trough systems) on sediment erodibility on a back-barrier tidal flat of the East Frisian Wadden Sea, Germany. Estuar Coast Shelf Sci 72:603–614
Li B, Cozzoli F, Soissons LM, Boumab TJ, Chen L (2017) Effects of bioturbation on the erodibility of cohesive versus non-cohesive sediments along a current-velocity gradient: a case study on cockles. J Exp Mar Biol Ecol 496:84–90
Lubarsky HV, Hubas C, Chocholek M, Larson F, Manz W, Paterson DM, Gerbersdorf SU (2010) The stabilisation potential of individual and mixed assemblages of natural bacteria and microalgae. PLoS One 5(11):e13794. https://doi.org/10.1371/journal.pone.0013794
Madsen KN, Nilson P, Sundbäck K (1993) The influence of benthic microalgae on the stability of a subtidal shallow water sediment. J Exp Mar Biol Ecol 170:159–177
Miller DC, Geider RJ, MacIntyre HL (1996) Microphytobenthos: the ecological role of the “secret garden” of unvegetated, shallow-water marine habitats. II Role in sediment stability and shallow-water food webs. Estuaries 19:202–212
Murphy RJ, Tolhurst TJ, Chapman MG, Underwood AJ (2008) Spatial variation of chlorophyll on estuarine mudflats determined by field-based remote sensing. Mar Ecol Prog Ser 365:45–55
Neu TR (1994) Biofilms and microbial mats. In: Krumbein WE, Paterson D, Stal L (eds) Biostabilization of sediments. Oldenburg, BIS-Verlag, pp 9–17
Neumeier M, Weigert J, Schaffler A, Wehrwein G, Muller-Ladner U, Scholmerich J, Wrede C, Buechler C (2006) Different effects of adiponectin isoforms in human monocytic cells. J Leukoc Biol 79:803–808
Noffke N (2010) Microbial mats in sandy deposits from the Archean era to today. Springer, Berlin
Noffke N, Awramik SM (2013) Stromatolites and MISS—differences between relatives. GSA Today 23:4–9
Noffke N, Krumbein WE (1999) A quantitative approach to sedimentary surface structures contoured by the interplay of microbial colonization and physical dynamics. Sedimentology 46:417–426
Noffke N, Gerdes G, Klenke T, Krumbein WE (2001) Microbially induced sedimentary structures-a new category within the classification of primary sedimentary structures. J Sediment Res 71:649–656
Noffke N, Knoll AH, Grotzinger JP (2002) Sedimentary controls on the formation and preservation of microbial mats in siliciclastic deposits: a case study from the Upper Neoproterozoic Nama Group, Namibia. Palaios 17:533–544
Noffke N, Christian D, Wacey D, Hazen RM (2013a) Microbially induced sedimentary structures recording a complex microbial ecosystem in the 3.5 Ga Dresser Formation, Pilbara, Western Australia. Astrobiology 13:1–22
Noffke N, Decho AW, Stoodley P (2013b) Slime through time: the fossil record of prokaryote evolution. PALAIOS 28:1–5
Pan J, Bournod CN, Pizani NV, Cuadrado DG, Carmona NB (2013) Characterization of microbial mats from a siliciclastic tidal flat (Bahía Blanca estuary, Argentina). Geomicrobiol J 30:665–674
Pascual M, Guichard F (2005) Criticality and disturbance in spatial ecological systems. Trends Ecol Evol 20:88–95
Passarelli C, Olivier F, Paterson DM, Meziane T, Hubas C (2014) Organisms as cooperative ecosystem engineers in intertidal flats. J Sea Res 92:92–101
Paterson DM (1995) Biogenic structure of early sediment fabric visualized by low temperature scanning electron microscopy. J Geol Soc 152:131–140
Pierre G, Zhao J, Orvain F, Dupuy C, KleinGL GM, Maugard T (2014) Seasonal dynamics of extracellular polymeric substances (EPS) in surface sediments of a diatom-dominated intertidal mudflat (Marennes-Oléron France). J Sea Res 92:26–35
Rietkerk M, van de Koppel J (2008) Regular pattern formation in real ecosystems. Trends Ecol Evol 23:169–175
Rodrigues AM, Meireles S, Pereira T, Gama A, Quintino V (2006) Spatial patterns of benthic macroinvertebrates in intertidal areas of a Southern European estuary: the Tagus, Portugal. Hydrobiologia 555:99–113
Schieber J, Bose PK, Eriksson PG, Sarkar S (2007) Paleogeography of microbial mats in terrigenous clastic-environmental distribution of associated sedimentary features and the role of geologic time. In: Schieber J, Bose P, Eriksson PG, Bannerjee S, Sarkar S, Altermann W, Catuneau O (eds) Atlas of microbial mat features preserved within the siliciclastic rock record. Elsevier, Amsterdam, pp 267–275
Schultze-Lam S, Fortin D, Davis BS, Beveridge TJ (1996) Mineralization of bacterial surfaces. Chem Geol 132:171–181
Seuront L, Spilmont N (2002) Self-organized criticality in intertidal microphytobenthos patch patterns. Phys A Stat Mech Appl 313:513–539
Shields A (1936) Application of similarity principles and turbulence research to bed-load movement. Mitt Preussischen Versuchsanstalt fur Wasserbau und Schiffbau 26:5–24
Stal LJ (2010) Microphytobenthos as a biogeomorphological force in intertidal sediment stabilization. Ecol Eng 36:236–245
Stal LJ, de Brouwer JFC (2003) Biofilm formation by benthic diatoms and their influence on the stabilization of intertidal mudflats. Berichte-Forschungszentrum Terramare 12:109–111
Stal LJ, de Brouwer JFC (2005) Diatom biofilms and the stability of intertidal mudflats. Geophys Res Abstr 7:20–28
Steele DJ, Franklin DJ, Underwood JC (2014) Protection of cells from salinity stress by extracellular polymeric substances in diatom biofilms. Biofouling 30:987–998
Stolz J (2000) Structure of microbial mats and biofilms. In: Riding RE, Awramik SM (eds) Microbial sediments. Springer, Berlin, pp 1–8
Stoodley P (2016) Flow disrupts communication. Nat Microbiol 1:15012
Stoodley P, Dodds I, Boyle JD, Lappin-Scott HM (1999) Influence of hydrodynamics and nutrients on biofilm structure. J Appl Microbiol 85:19S–28S
Stoodley P, Cargo R, Rupp CJ, Wilson S, Klapper I (2002) Biofilm material properties as related to shearinduced deformation and detachment phenomena. J Ind Microbiol Biotechnol 29:361–367
Tolhurst TJ, Watts CW, Vardy S, Saunders JE, Consalvey MC, Paterson DM (2008) The effects of simulated rain on the erosion threshold and biogeochemical properties of intertidal sediments. Cont Shelf Res 28:1217–1230
Ubertini M, Lefebvre S, Rakotomalala C, Orvain F (2015) Impact of sediment grain-size and biofilm age on epipelic microphytobenthos resuspension. J Exp Mar Biol Ecol 467:52–64
Underwood GJC (1997) Microalgal colonization in a salt-marsh restoration scheme. Estuar Coast Shelf Sci 44:471–481
Underwood GJC, Kromkamp J (1999) Primary production by phytoplankton and microphytobenthos in estuaries. Adv Ecol Res 29:93–153
Underwood GJC, Paterson DM (2003) The importance of extracellular carbohydrate production by marine epipelic diatoms. Adv Bot Res 40:184–240
Underwood GJC, Smith DJ (1998) Predicting epipelic diatom exopolymer concentrations in intertidal sediments from sediment chlorophyll a. Microb Ecol 35:116–125
Underwood GJC, Paterson DM, Parkes RJ (1995) The measurement of microbial carbohydrate exopolymers from intertidal sediments. Limnol Oceanogr 40:1243–1253
Underwood GJC, Boulcott M, Raines CA, Waldron K (2004) Environmental effects on exopolymer production by marine benthic diatoms: dynamics, changes in composition, and pathways of production. J Phycol 40:293–304
Van Colen C, Underwood GJC, Serôdio J, Paterson DM (2014) Ecology of intertidal microbial biofilms: mechanisms patterns and future research needs. J Sea Res 92:2–5
Van de Koppel J, Herman PMJ, Thoolen P, Heip CHR (2001) Do alternate stable states occur in natural ecosystems? Evidence from a tidal flat. Ecology 82:3449–3461
van der Wal D, Herman PMJ, Forster RM, Ysebaert T, Rossi F, Knaeps E, Plancke YMG, Ides SJ (2008) Distribution and dynamics of intertidal macrobenthos predicted from remote sensing: response to microphytobenthos and environment. Mar Ecol Prog Ser 367:57–72
Van Gemerden H (1993) Microbial mats: a joint venture. Mar Geol 113:3–25
Visscher PT, Stolz JF (2005) Microbial mats as bioreactors: populations processes and products. Palaeogeogr Palaeoclimatol Palaeoecol 219:87–100
Wahl WK, Lok T, van der Meer J, Piersm T, Weissing J (2005) Spatial clumping of food and social dominance affect interference competition among ruddy turnstones. Behav Ecol 16:834–844
Weerman EJ, van de Koppel J, Eppinga MB, Montserrat F, Liu QX, Herman PMJ (2010) Spatial self-organization on intertidal mudflats through biophysical stress divergence. Am Nat 176:15–32
Weerman EJ, Herman PMJ, van de Koppel J (2011a) Macrobenthos abundance and distribution on a spatially patterned intertidal flat. Mar Ecol Prog Ser 440:95–103
Weerman EJ, Herman PMJ, van de Koppel J (2011b) Top-down control inhibits spatial self-organization of a patterned landscape. Ecology 92:487–495
Weerman EJ, Van Belzen J, Rietkerk M, Temmerman S, Kefi S, Herman PMJ, Van de Koppel J (2012) Changes in diatom patch-size distribution and degradation in a spatially self-organized intertidal mudflat ecosystem. Ecology 93:608–618
Whitehouse R, Bassoullet P, Dyer K, Mitchener H, Roberts W (2000) The influence of bedforms on flow and sediment transport over intertidal mudflats. Cont Shelf Res 20:1099–1124
Wolf G (2007) Kinetic modeling of phototrophic biofilms: the PHOBIA model. Biotechnol Bioeng 97:1064–1079
Yallop ML, de Winder B, Paterson DM, Stal LJ (1994) Comparative structure, primary production and biogenic stabilization of cohesive and non-cohesive marine sediments inhabited by microphytobenthos. Estuar Coast Shelf Sci 39:565–582
Zilber-Rosenberg I, Rosenberg E (2008) Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution. FEMS Microbiol Rev 32:723–735
Acknowledgements
We thank Prof. Nora Noffke and Prof. David Paterson for very helpful discussions during the preparation of this chapter.
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Beninger, P.G., Cuadrado, D., van de Koppel, J. (2018). Sedimentary and Biological Patterns on Mudflats. In: Beninger, P. (eds) Mudflat Ecology. Aquatic Ecology Series, vol 7. Springer, Cham. https://doi.org/10.1007/978-3-319-99194-8_8
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