Abstract
Many machine learning and pattern classification methods have been applied to the diagnosis of Alzheimer’s disease (AD) and its prodromal stage, which is mild cognitive impairment (MCI). Recently, multi-task feature selection methods are typically used for joint selection of common features across multiple modalities. In this chapter, we review several latest multi-modality feature learning works in diagnoses of AD. Specifically, multi-task feature selection (MTFS) is proposed to jointly select the common subset of relevant features for multiple variables from each modality. Based on MTFS, a manifold regularized multi-task feature learning method (M2TFS) is used to preserve both the intrinsic relatedness among multiple modalities of data and the data distribution information in each modality. However, most existing methods focus on mining the relationship across multiple modalities of the same subjects, while ignoring the potentially useful relationship across different subjects. In order to overcome this issue, label-aligned multi-task feature selection (LAMTFS) which can fully explore the realtionships across both modalities and subjects is proposed. Then a discriminative multi-task feature selection method is proposed to select the most discriminative features for multi-modality based classification. The experimental results on the baseline magnetic resonance image (MRI), fluorodeoxyglucose positron emission tomography (FDG-PET), and cerebrospinal fluid (CSF) data of subjects from AD neuroimaging initiative (ADNI) data base demonstrate the effectiveness of those above proposed methods.
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Apostolova, L.G., Hwang, K.S., Andrawis, J.P., Green, A.E., Babakchanian, S., Morra, J.H., Cummings, J.L., Toga, A.W., Trojanowski, J.Q., Shaw, L.M., et al.: 3d pib and csf biomarker associations with hippocampal atrophy in adni subjects. Neurobiol. Aging 31(8), 1284–1303 (2010)
Argyriou, A., Evgeniou, T., Pontil, M.: Convex multi-task feature learning. Mach. Learn. 73(3), 243–272 (2008)
Brookmeyer, R., Johnson, E., Ziegler-Graham, K., Arrighi, H.M.: Forecasting the global burden of alzheimers disease. Alzheimer’s dementia 3(3), 186–191 (2007)
Cai, D., He, X., Zhou, K., Han, J., Bao, H.: Locality sensitive discriminant analysis. In: IJCAI, pp. 708–713 (2007)
Chang, C.C., Lin, C.J.: Libsvm: a library for support vector machines. ACM Trans. Intell. Syst. Technol. (TIST) 2(3), 27 (2011)
Chincarini, A., Bosco, P., Calvini, P., Gemme, G., Esposito, M., Olivieri, C., Rei, L., Squarcia, S., Rodriguez, G., Bellotti, R., et al.: Local mri analysis approach in the diagnosis of early and prodromal alzheimer’s disease. NeuroImage 58(2), 469–480 (2011)
Ckriet, G., Deng, M., Cristianini, N., NOBLE, W.: Rernel-based data fusion and its application to protein function prediction in yeast. Biocomputing 300 (2004)
Dai, Z., Yan, C., Wang, Z., Wang, J., Xia, M., Li, K., He, Y.: Discriminative analysis of early alzheimer’s disease using multi-modal imaging and multi-level characterization with multi-classifier (m3). Neuroimage 59(3), 2187–2195 (2012)
Drzezga, A., Lautenschlager, N., Siebner, H., Riemenschneider, M., Willoch, F., Minoshima, S., Schwaiger, M., Kurz, A.: Cerebral metabolic changes accompanying conversion of mild cognitive impairment into alzheimer’s disease: a pet follow-up study. Eur. J. Nucl. Med. Mol. Imaging 30(8), 1104–1113 (2003)
Fan, Y., Resnick, S.M., Wu, X., Davatzikos, C.: Structural and functional biomarkers of prodromal alzheimer’s disease: a high-dimensional pattern classification study. Neuroimage 41(2), 277–285 (2008)
Foster, N.L., Heidebrink, J.L., Clark, C.M., Jagust, W.J., Arnold, S.E., Barbas, N.R., DeCarli, C.S., Turner, R.S., Koeppe, R.A., Higdon, R., et al.: Fdg-pet improves accuracy in distinguishing frontotemporal dementia and alzheimer’s disease. Brain 130(10), 2616–2635 (2007)
Higdon, R., Foster, N.L., Koeppe, R.A., DeCarli, C.S., Jagust, W.J., Clark, C.M., Barbas, N.R., Arnold, S.E., Turner, R.S., Heidebrink, J.L., et al.: A comparison of classification methods for differentiating fronto-temporal dementia from alzheimer’s disease using fdg-pet imaging. Stat. Med. 23(2), 315–326 (2004)
Hinrichs, C., Singh, V., Mukherjee, L., Xu, G., Chung, M.K., Johnson, S.C., Initiative, A.D.N., et al.: Spatially augmented lpboosting for ad classification with evaluations on the adni dataset. Neuroimage 48(1), 138–149 (2009)
Hinrichs, C., Singh, V., Xu, G., Johnson, S.: Mkl for robust multi-modality ad classification. In: Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009, pp. 786–794. Springer (2009)
Huang, S., Li, J., Ye, J., Wu, T., Chen, K., Fleisher, A., Reiman, E.: Identifying alzheimer’s disease-related brain regions from multi-modality neuroimaging data using sparse composite linear discrimination analysis. In: Advances in Neural Information Processing Systems, pp. 1431–1439 (2011)
Jie, B., Zhang, D., Cheng, B., Shen, D.: Manifold regularized multitask feature learning for multimodality disease classification. Hum. Brain Mapp. 36(2), 489–507 (2015)
Landau, S., Harvey, D., Madison, C., Reiman, E., Foster, N., Aisen, P., Petersen, R., Shaw, L., Trojanowski, J., Jack, C., et al.: Comparing predictors of conversion and decline in mild cognitive impairment. Neurology 75(3), 230–238 (2010)
Liu, F., Wee, C.Y., Chen, H., Shen, D.: Inter-modality relationship constrained multi-modality multi-task feature selection for alzheimer’s disease and mild cognitive impairment identification. NeuroImage 84, 466–475 (2014)
Liu, J., Ji, S., Ye, J., et al.: Slep: Sparse Learning with Efficient Projections, vol. 6, no. 491. Arizona State University (2009)
Obozinski, G., Taskar, B., Jordan, M.: Multi-task feature selection. Technical Report, Statistics Department, UC Berkeley (2006)
Obozinski, G., Taskar, B., Jordan, M.I.: Joint covariate selection and joint subspace selection for multiple classification problems. Stat. Comput. 20(2), 231–252 (2010)
Oliveira Jr, P.P.d.M., Nitrini, R., Busatto, G., Buchpiguel, C., Sato, J.R., Amaro Jr, E.: Use of SVM methods with surface-based cortical and volumetric subcortical measurements to detect alzheimer’s disease. J. Alzheimer’s Dis. 19(4), 1263–1272 (2010)
Orrù, G., Pettersson-Yeo, W., Marquand, A.F., Sartori, G., Mechelli, A.: Using support vector machine to identify imaging biomarkers of neurological and psychiatric disease: a critical review. Neurosci. Biobehav. Rev. 36(4), 1140–1152 (2012)
Pudil, P., Novovičová, J., Kittler, J.: Floating search methods in feature selection. Pattern Recogn. Lett. 15(11), 1119–1125 (1994)
Shattuck, D.W., Sandor-Leahy, S.R., Schaper, K.A., Rottenberg, D.A., Leahy, R.M.: Magnetic resonance image tissue classification using a partial volume model. NeuroImage 13(5), 856–876 (2001)
Shen, D., Davatzikos, C.: Hammer: hierarchical attribute matching mechanism for elastic registration. IEEE Trans. Med. Imaging 21(11), 1421–1439 (2002)
Sled, J.G., Zijdenbos, A.P., Evans, A.C.: A nonparametric method for automatic correction of intensity nonuniformity in mri data. IEEE Trans. Med. Imaging 17(1), 87–97 (1998)
Smith, S.M.: Fast robust automated brain extraction. Hum. Brain Mapp. 17(3), 143–155 (2002)
Sui, J., Adali, T., Yu, Q., Chen, J., Calhoun, V.D.: A review of multivariate methods for multimodal fusion of brain imaging data. J. Neurosci. Methods 204(1), 68–81 (2012)
Tibshirani, R.: Regression shrinkage and selection via the lasso. J. R. Stat. Soc. Ser B (Methodological) 267–288 (1996)
Walhovd, K., Fjell, A., Dale, A., McEvoy, L., Brewer, J., Karow, D., Salmon, D., Fennema-Notestine, C., Initiative, A.D.N., et al.: Multi-modal imaging predicts memory performance in normal aging and cognitive decline. Neurobiol. Aging 31(7), 1107–1121 (2010)
Wang, Y., Fan, Y., Bhatt, P., Davatzikos, C.: High-dimensional pattern regression using machine learning: from medical images to continuous clinical variables. Neuroimage 50(4), 1519–1535 (2010)
Wang, Z., Chen, S., Sun, T.: Multik-mhks: a novel multiple kernel learning algorithm. IEEE Trans. Pattern Anal. Mach. Intell. 30(2), 348–353 (2008)
Westman, E., Simmons, A., Zhang, Y., Muehlboeck, J.S., Tunnard, C., Liu, Y., Collins, L., Evans, A., Mecocci, P., Vellas, B., et al.: Multivariate analysis of mri data for alzheimer’s disease, mild cognitive impairment and healthy controls. Neuroimage 54(2), 1178–1187 (2011)
Xue, H., Chen, S., Yang, Q.: Discriminatively regularized least-squares classification. Pattern Recogn. 42(1), 93–104 (2009)
Ye, J., Wu, T., Li, J., Chen, K.: Machine learning approaches for the neuroimaging study of alzheimer’s disease. Computer 44(4), 99–101 (2011)
Ye, T., Zu, C., Jie, B., Shen, D., Zhang, D., Initiative, A.D.N., et al.: Discriminative multi-task feature selection for multi-modality classification of alzheimers disease. Brain Imaging Behav. 1–11 (2015)
Yuan, M., Lin, Y.: Model selection and estimation in regression with grouped variables. J. R. Stat. Soc. Ser. B (Statistical Methodology) 68(1), 49–67 (2006)
Zhang, D., Shen, D., Initiative, A.D.N., et al.: Multi-modal multi-task learning for joint prediction of multiple regression and classification variables in alzheimer’s disease. NeuroImage 59(2), 895–907 (2012)
Zhang, D., Wang, Y., Zhou, L., Yuan, H., Shen, D., Initiative, A.D.N., et al.: Multimodal classification of alzheimer’s disease and mild cognitive impairment. Neuroimage 55(3), 856–867 (2011)
Zhang, Y., Brady, M., Smith, S.: Segmentation of brain mr images through a hidden markov random field model and the expectation-maximization algorithm. IEEE Trans. Med. Imaging 20(1), 45–57 (2001)
Zu, C., Jie, B., Liu, M., Chen, S., Shen, D., Zhang, D., Initiative, A.D.N., et al.: Label-aligned multi-task feature learning for multimodal classification of alzheimers disease and mild cognitive impairment. Brain Imaging Behav. 1–12 (2015)
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Zhang, D., Zu, C., Jie, B., Ye, T. (2018). Multi-modality Feature Learning in Diagnoses of Alzheimer’s Disease. In: Suzuki, K., Chen, Y. (eds) Artificial Intelligence in Decision Support Systems for Diagnosis in Medical Imaging. Intelligent Systems Reference Library, vol 140. Springer, Cham. https://doi.org/10.1007/978-3-319-68843-5_1
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