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Exploring Structure and Evolution of the Genetic Code with the Software Tool GCAT

  • E. Fimmel
  • M. Gumbel
  • L. Strüngmann
Conference paper
Part of the Advances in Intelligent Systems and Computing book series (AISC, volume 658)

Abstract

The genetic code can be seen as the major key to biological self-organisation. In fact, all living organisms regardless of whether they are plants, bacteria or mammals have the same molecular bases: Adenine, cytosine, guanine, and thymine. Unidimensional sequences of these bases contain the genetic information for the synthesis of proteins in all forms of life. Thus, one of the most fascinating questions is to explain why evolution has produced the current genetic code and why it exists in its present form.

Motivated by these fundamental questions, a new software tool – Genetic Code Analysis Toolkit (GCAT) – was developed which can be used to investigate properties of the genetic code in order to develop hypotheses about its origin and evolution. The main focus of the tool has been put on the graphical visualisation of the data.

In the present paper we will describe in short the tool GCAT and give a couple of applications presenting new results on circular codes and the structure of some ancient codes.

Keywords

Circular Codes Genetic Information Binary Dichotomic Algorithms GCAT Genetic Code Analysis Toolkit 

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Copyright information

© Springer International Publishing AG 2018

Authors and Affiliations

  1. 1.Institute for Mathematical BiologyMannheim University of Applied SciencesMannheimGermany

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