Digital Libraries: From Digital Resources to Challenges in Scientific Data Sharing and Re-Use

  • Maristella Agosti
  • Nicola Ferro
  • Gianmaria SilvelloEmail author
Part of the Studies in Big Data book series (SBD, volume 31)


Digital libraries and digital archives are the information management systems for storing, indexing, searching, accessing, curating and preserving digital resources which manage our cultural and scientific knowledge heritage (KH).


  1. 1.
    Report from Dagstuhl seminar 16041: reproducibility of data-oriented experiments in e-science, in Report from Dagstuhl Seminar 16041: Reproducibility of Data-Oriented Experiments in e-Science ed. By J. Freire, N. Fuhr, A Rauber. Dagstuhl Reports, Vol. 6(1) (Schloss Dagstuhl–Leibniz-Zentrum fuer Informatik, Germany, 2016)Google Scholar
  2. 2.
    D. Abadi, R. Agrawal, A. Ailamaki, M. Balazinska, P.A. Bernstein, M.J. Carey, S. Chaudhuri, J. Dean, A. Doan, M.J. Franklin, J. Gehrke, L.M. Haas, A.Y. Halevy, J.M. Hellerstein, Y.E. Ioannidis, H.V. Jagadish, D. Kossmann, S. Madden, S. Mehrotra, T. Milo, J.F. Naughton, R. Ramakrishnan, V. Markl, C. Olston, B.C. Ooi, C. Rè, D. Suciu, M. Stonebraker, T. Walter, J. Widom, The Beckman report on database research. ACM SIGMOD Rec. 43(3), 61–70 (2014)CrossRefGoogle Scholar
  3. 3.
    M. Agosti, S. Berretti, G. Brettlecker, A. del Bimbo, N. Ferro, N. Fuhr, D. Keim, C.P. Klas, T. Lidy, D. Milano, M. Norrie, P. Ranaldi, A. Rauber, H.J. Schek, T. Schreck, H. Schuldt, B. Signer, M. Springmann, DelosDLMS – the Integrated DELOS Digital Library Management System, in Thanos et al. [60], pp. 36–45Google Scholar
  4. 4.
    M. Agosti, J. Borbinha, S. Kapidakis, C. Papatheodorou, G. Tsakonas, (eds.), in Proceedings of 13th European Conference on Research and Advanced Technology for Digital Libraries (ECDL 2009). Lecture Notes in Computer Science (LNCS), vol. 5714 (Springer, Heidelberg, Germany, 2009)Google Scholar
  5. 5.
    M. Agosti, O. Conlan, N. Ferro, C. Hampson, G. Munnelly, Interacting with digital cultural heritage collections via annotations: the CULTURA approach, in Proceedings of 13th ACM Symposium on Document Engineering (DocEng 2013) ed. By S. Marinai, K. Marriot (ACM Press, New York, USA, 2013), pp. 13–22Google Scholar
  6. 6.
    M. Agosti, O. Conlan, N. Ferro, C. Hampson, G. Munnelly, C. Ponchia, G. Silvello, Enriching digital cultural heritage collections via annotations: the CULTURA approach, in 22nd Italian Symposium on Advanced Database Systems, SEBD 2014, ed. By S. Greco, A. Picariello (2014), pp. 319–326Google Scholar
  7. 7.
    M. Agosti, E. Di Buccio, N. Ferro, I. Masiero, S. Peruzzo, G. Silvello, DIRECTions: Design and specification of an IR evaluation infrastructure, in Information Access Evaluation. Multilinguality, Multimodality, and Visual Analytics ed. By T. Catarci, P. Forner, D. Hiemstra, A. Peñas, G. Santucci, Proceedings of the Third International Conference of the CLEF Initiative (CLEF 2012). Lecture Notes in Computer Science (LNCS), vol. 7488 (Springer, Heidelberg, Germany, 2012)Google Scholar
  8. 8.
    M. Agosti, G.M. Di Nunzio, N. Ferro, The Importance of Scientific Data Curation for Evaluation Campaigns, in Thanos et al. [60], pp. 157–166Google Scholar
  9. 9.
    M. Agosti, N. Ferro, Annotations as context for searching documents, in Proceedings of 5th International Conference on Conceptions of Library and Information Science – Context: nature, impact and role (CoLIS 5) ed. By F. Crestani, I. Ruthven. Lecture Notes in Computer Science (LNCS), vol. 3507 (Springer, Heidelberg, Germany, 2005), pp. 155–170Google Scholar
  10. 10.
    M. Agosti, N. Ferro, A formal model of annotations of digital content. ACM Trans. Inf. Syst. (TOIS) 26(1), 3:1–3:57 (2008)Google Scholar
  11. 11.
    M. Agosti, N. Ferro, Towards an Evaluation Infrastructure for DL Performance Evaluation, in Evaluation of Digital Libraries: An insight into useful applications and methods, ed. by G. Tsakonas, C. Papatheodorou (Chandos Publishing, Oxford, 2009), pp. 93–120CrossRefGoogle Scholar
  12. 12.
    M. Agosti, N. Ferro, G. Silvello, The NESTOR framework: manage, access and exchange hierarchical data structures, in Proceedings of 18th Italian Symposium on Advanced Database Systems (SEBD 2010) ed. By R. Martoglia, S. Bergamaschi, S. Lodi, C. Sartori(Società Editrice Esculapio, Bologna, Italy, 2010), pp. 242–253Google Scholar
  13. 13.
    M. Agosti, N. Ferro, G. Silvello, Digital library interoperability at high level of abstraction. Future Gener. Comput. Syst. (FGCS) 55, 129–146 (2016)CrossRefGoogle Scholar
  14. 14.
    M. Agosti, M. Manfioletti, N. Orio, C. Ponchia, Evaluating the deployment of a collection of images in the CULTURA environment, in Proceedings of the International Conference on Theory and Practice of Digital Libraries, TPDL 2013. Lecture Notes in Computer Science, vol. 8092 (Springer, 2013), pp. 180–191Google Scholar
  15. 15.
    M. Agosti, M. Masotti, Design of an OPAC database to permit different subject searching accesses in a multi-disciplines universities library catalogue database, in Belkin et al. [19], pp. 245–255Google Scholar
  16. 16.
    J. Arguello, M. Crane, F. Diaz, J. Lin, A. Trotman, Report on the SIGIR 2015 workshop on reproducibility, inexplicability, and generalizability of results (RIGOR). SIGIR Forum 49(2), 107–116 (2015)CrossRefGoogle Scholar
  17. 17.
    T.G Armstrong, A. Moffat, W. Webber, J. Zobel, EvaluatIR: an online tool for evaluating and comparing IR systems, in Proceedings of 32nd Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR 2009) ed. By J. Allan, J.A Aslam, M. Sanderson, C. Zhai, J. Zobel (ACM Press, New York, USA, 2009), p. 833Google Scholar
  18. 18.
    A. Badan, L. Benvegnù, M. Biasetton, G. Bonato, A. Brighente, A. Cenzato, P. Ceron, G. Cogato, S. Marchesin, A. Minetto, L. Pellegrina, A. Purpura, R. Simionato, N. Soleti, M. Tessarotto, A. Tonon, F. Vendramin, N. Ferro, Towards open-source shared implementations of keyword-based access systems to relational data, in Proceedings of 1st EDBT/ICDT Workshop on Keyword-based Access and Ranking at Scale (KARS 2017), ed. By N. Ferro, F. Guerra, Z. Ives, G. Silvello, M. Theobald. CEUR Workshop Proceedings, ISSN 1613-0073 (2017),
  19. 19.
    N.J. Belkin, P. Ingwersen, A. Mark Pejtersen, E.A. Fox (eds.), in Proceedings of 15th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR 1992) (ACM Press, New York, USA, 1992)Google Scholar
  20. 20.
    S. Bergamaschi, N. Ferro, F. Guerra, G. Silvello, A perspective look at keyword-based search over relation data and its evaluation, in Proceedings of 23rd Italian Symposium on Advanced Database Systems (SEBD 2015) ed. By P. Atzeni, M. Lenzerini, D. Lembo, R. Torlone (2015)Google Scholar
  21. 21.
    S. Bergamaschi, N. Ferro, F. Guerra, G. Silvello, Keyword-based search over databases: a roadmap for a reference architecture paired with an evaluation framework. LNCS Trans. Comput. Collect. Intell. (TCCI) 9630, 1–20 (2016)Google Scholar
  22. 22.
    C.L. Borgman, The Conundrum of Sharing Research Data. JASIST 63(6), 1059–1078 (2012),
  23. 23.
    C.L. Borgman, Why are the attribution and citation of scientific data important? in Report from Developing Data Attribution and Citation Practices and Standards: An International Symposium and Workshop. National Academy of Sciences’ Board on Research Data and Information (National Academies Press, Washington DC, 2012), pp. 1–8Google Scholar
  24. 24.
    C.L. Borgman, Big Data, Little Data, No Data (MIT Press, Cambridge, 2015)Google Scholar
  25. 25.
    J. Brase, Y. Socha, S. Callaghan, C.L. Borgman, P.F. Uhlir, B. Carroll, Data Citation: Principles and Practice, Research Data Management: Practical Strategies for Information Professionals (Purdue University Press, West Lafayette, 2014), pp. 167–186Google Scholar
  26. 26.
    P. Buneman, S.B. Davidson, J. Frew, Why data citation is a computational problem. Commun. ACM (CACM) 59(9), 50–57 (2016)CrossRefGoogle Scholar
  27. 27.
    P. Buneman, G. Silvello, A rule-based citation system for structured and evolving datasets. IEEE Data Eng. Bull. 33(3), 33–41 (2010)Google Scholar
  28. 28.
    L. Candela, D. Castelli, N. Ferro, Y. Ioannidis, G. Koutrika, C. Meghini, P. Pagano, S. Ross, D. Soergel, M. Agosti, M. Dobreva, V. Katifori, H. Schuldt, The DELOS Digital Library Reference Model. Foundations for Digital Libraries. ISTI-CNR at Gruppo ALI, Pisa, Italy (2007),
  29. 29.
    J. Coffman, A.C. Weaver, An empirical performance evaluation of relational keyword search techniques. IEEE Trans. Knowl. Data Eng. (TKDE) 1(26), 30–42 (2014)CrossRefGoogle Scholar
  30. 30.
    S.B. Davidson, D. Deutsch, M. Tova, G. Silvello, A model for fine-grained data citation, in 8th Biennial Conference on Innovative Data Systems Research (CIDR 2017) (2017)Google Scholar
  31. 31.
    M. Dussin, N. Ferro, Managing the knowledge creation process of large-scale evaluation campaigns, in Agosti et al. [4], pp. 63–74Google Scholar
  32. 32.
    N. Ferro, Annotation search: the fast way, in Agosti et al. [4], pp. 15–26Google Scholar
  33. 33.
    N. Ferro, The FAST annotation service, in Proceedings of 17th Italian Symposium on Advanced Database Systems (SEBD 2009), ed. By V. De Antonellis, S. Castano, B. Catania, G. Guerrini (Seneca Edizioni, Torino, Italia, 2009), pp. 169–176Google Scholar
  34. 34.
    N. Ferro, Reproducibility challenges in information retrieval evaluation. ACM J. Data Inf. Quality (JDIQ) 8(2), 8:1–8:4 (2017)Google Scholar
  35. 35.
    N. Ferro, F. Crestani, M.F. Moens, J. Mothe, F. Silvestri, G.M. Di Nunzio, C. Hauff, G. Silvello, Advances in information retrieval, in Proceedings of 38th European Conference on IR Research (ECIR 2016). Lecture Notes in Computer Science (LNCS), vol. 9626 (Springer, Heidelberg, Germany, 2016)Google Scholar
  36. 36.
    N. Ferro, N. Fuhr, K. Järvelin, N. Kando, M. Lippold, J. Zobel, Increasing reproducibility in IR: findings from the dagstuhl seminar on reproducibility of data-oriented experiments in e-science. SIGIR Forum 50(1) (2016)Google Scholar
  37. 37.
    N. Ferro, G. Silvello, The NESTOR framework: how to handle hierarchical data structures, in Agosti et al. [4], pp. 215–226Google Scholar
  38. 38.
    N. Ferro, G. Silvello, FAST and NESTOR: how to exploit annotation hierarchies, in Digital Libraries. Proceedings of the Sixth Italian Research Conference (IRCDL 2010), ed. By M. Agosti, F. Esposito, C. Thanos (Springer, Heidelberg, Germany, 2010), pp. 55–66Google Scholar
  39. 39.
    N. Ferro, G. Silvello, The NESTOR model: properties and applications in the context of digital archives, in Proceedings 19th Italian Symposium on Advanced Database Systems (SEBD 2011), ed. By G. Mecca, S. Greco, (Università della Basilicata, Italy, 2011), pp. 274–285Google Scholar
  40. 40.
    N. Ferro, G. Silvello, Modeling archives by means of OAI-ORE, in Digital Libraries and Archives - Proceedings of 8th Italian Research Conference (IRCDL 2012), ed. By M. Agosti, F. Esposito, S. Ferilli, N. Ferro. Communications in Computer and Information Science (CCIS), vol. 354 (Springer, Heidelberg, Germany, 2013)Google Scholar
  41. 41.
    N. Ferro, G. Silvello, NESTOR: a formal model for digital archives. Inf. Process. Manag. 49(6), 1206–1240 (2013)CrossRefGoogle Scholar
  42. 42.
    N. Ferro, G. Silvello, Descendants, ancestors, children and parent: a set-based approach to efficiently address Xpath primitives. Inf. Process. Manag. 52(3), 399–429 (2016)CrossRefGoogle Scholar
  43. 43.
    N. Ferro, G. Silvello, Fast access to XML data: a set-based approach, in Proceedings of 24th Italian Symposium on Advanced Database Systems (SEBD 2016), ed. By P. Paolini, M.A. Bochicchio, G. Mecca (2016)Google Scholar
  44. 44.
    J. Freire, P. Bonnet, D. Shasha, Computational reproducibility: state-of-the-art, challenges, and database research opportunities, in Proceedings of the ACM SIGMOD International Conference on Management of Data, SIGMOD 2012 (2012), pp. 593–596,
  45. 45.
    M.A. Gonçalves, E.A. Fox, L.T. Watson, N.A. Kipp, Streams, structures, spaces, scenarios, societies (5s): a formal model for digital libraries. ACM Trans. Inf. Syst. (TOIS) 22(2), 270–312 (2004)CrossRefGoogle Scholar
  46. 46.
    A. Hanbury, G. Kazai, A. Rauber, N. Fuhr (eds.), Advances in information retrieval, in Proceedings of 37th European Conference on IR Research (ECIR 2015). Lecture Notes in Computer Science (LNCS), vol. 9022 (Springer, Heidelberg, Germany, 2015)Google Scholar
  47. 47.
    T. Hey, S. Tansley, K. Tolle (eds.), The Fourth Paradigm: Data-Intensive Scientific Discovery (Microsoft Research, USA, 2009)Google Scholar
  48. 48.
    C.R. Hildreth (ed.), The Online Catalogue: Developments and Directions (Library Association, London, 1989)Google Scholar
  49. 49.
    Y.E. Ioannidis, Digital libraries at a crossroads. Int. J. Digi. Libr. 5(4), 255–265 (2005)CrossRefGoogle Scholar
  50. 50.
    A. Lipani, F. Piroi, L. Andersson, A. Hanbury, An information retrieval ontology for information retrieval nanopublications, in Information Access Evaluation – Multilinguality, Multimodality, and Interaction. Proceedings of the Fifth International Conference of the CLEF Initiative (CLEF 2014), ed. By E. Kanoulas, M. Lupu, P. Clough, M. Sanderson, M. Hall, A. Hanbury, E. Toms. Lecture Notes in Computer Science (LNCS), vol. 8685, (Springer, Heidelberg, Germany, 2014), pp. 44–49Google Scholar
  51. 51.
    S. Pröll, A. Rauber, Scalable data citation in dynamic, large databases: model and reference implementation, in Proceedings of the 2013 IEEE International Conference on Big Data, ed. By X. Hu, T.L. Young, V. Raghavan, B.W. Wah, R. Baeza-Yates, G. Fox, C. Shahabi, M. Smith, Q. Yang, R. Ghani, W. Fan, R. Lempel, R. Nambiar (IEEE, 2013), pp. 307–312Google Scholar
  52. 52.
    G. Silvello, Structural and content queries on the nested sets model, in Proceedings of 20th Italian Symposium on Advanced Database Systems (SEBD 2012), ed. By N. Ferro, L. Tanca (Edizioni Libreria Progetto, Padova, Italy, 2012), pp. 283—288Google Scholar
  53. 53.
    G. Silvello, A Methodology for Citing Linked Open Data Subsets. D-Lib Mag. 21(1/2) (2015),
  54. 54.
    G. Silvello, Linked open data framework for serendipity in history of art research, in Proceedings of 1st AI*IA Workshop on Intelligent Techniques At LIbraries and Archives co-located with XIV Conference of the Italian Association for Artificial Intelligence, IT@LIA@AI*IA 2015, ed. By S. Ferilli, N. Ferro. CEUR Workshop Proceedings, vol. 1509 (2015),
  55. 55.
    G. Silvello, Learning to cite framework: how to automatically construct citations for hierarchical data. J. Am. Soc. Inf. Sci. Technol. (JASIST) in print, 1–28 (2016)Google Scholar
  56. 56.
    G. Silvello, G. Bordea, N. Ferro, P. Buitelaar, T. Bogers, Semantic representation and enrichment of information retrieval experimental data. Int. J. Digit. Libr. (IJDL) in press, 1–28 (2016)Google Scholar
  57. 57.
    G. Silvello, N. Ferro, Data citation is coming. Introduction to the special issue on data citation. Bull. IEEE Technical Comm. Digi. Libr. (IEEE-TCDL) 12(1), 1–5 (2016)Google Scholar
  58. 58.
    G. Silvello, N. Ferro, Data citation is coming. Introduction to the special issue on data citation. Bull. IEEE Tech. Comm. Digit. Libr. Special Issue on Data Citation 12(1), 1–5 (2016)Google Scholar
  59. 59.
    C.M. Steiner, M. Agosti, M.S. Sweetnam, E.C. Hillemann, N. Orio, C. Ponchia, C. Hampson, G. Munnelly, A. Nussbaumer, D. Albert, O. Conlan, Evaluating a digital humanities research environment: the CULTURA approach. Int. J. Digit. Libr. (IJDL) 15(1), 53–70 (2014)CrossRefGoogle Scholar
  60. 60.
    C. Thanos, F. Borri, L. Candela, Digital libraries: research and development, in First International DELOS Conference. Revised Selected Papers. Lecture Notes in Computer Science (LNCS), vol. 4877 (Springer, Heidelberg, Germany, 2007)Google Scholar
  61. 61.
    M. Vernooy-Gerritsen, Enhanced Publications: Linking Publications and Research Data in Digital Repositories (Amsterdam University Press, Amsterdam, 2009)Google Scholar

Copyright information

© Springer International Publishing AG 2018

Authors and Affiliations

  • Maristella Agosti
    • 1
  • Nicola Ferro
    • 1
  • Gianmaria Silvello
    • 1
    Email author
  1. 1.Department of Information EngineeringUniversity of PaduaPaduaItaly

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