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Medical Entity and Relation Extraction from Narrative Clinical Records in Italian Language

  • Crescenzo Diomaiuta
  • Maria MercorellaEmail author
  • Mario Ciampi
  • Giuseppe De Pietro
Conference paper
Part of the Smart Innovation, Systems and Technologies book series (SIST, volume 76)

Abstract

Applying Natural Language Processing techniques enables to unlock precious information contained in free text clinical reports. In this paper, we propose a system able to annotate medical entities in narrative records. Considering that existing NLP systems mainly concern entity recognition in English language, we propose an NLP pipeline to manage clinical free text in Italian. The overall architecture includes a spell checker, sentence detector, word tokenizer, part-of-speech tagger, dictionary lookup annotator, and parsing rules annotator. Essentially, it uses a rule-based approach to extract relevant concepts regarding patient’s conditions, administered medications, or performed procedures, detecting their attributes, negated forms, and relations expressions. The indexing of the documents allows the user to retrieve relevant information, increasing his/her medical knowledge.

Keywords

Italian natural language processing Medical entity recognition Information Extraction Unstructured medical records UIMA 

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Copyright information

© Springer International Publishing AG 2018

Authors and Affiliations

  • Crescenzo Diomaiuta
    • 1
  • Maria Mercorella
    • 1
    Email author
  • Mario Ciampi
    • 1
  • Giuseppe De Pietro
    • 1
  1. 1.National Research Council of Italy, Institute of High Performance Computing and Networking - ICARNaplesItaly

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