Skip to main content

Comparison of Electro-Optical Strategies for Mimicking C. elegans Network Interconnectivity in Hardware

  • Chapter
  • First Online:
Advances in Neurotechnology, Electronics and Informatics

Part of the book series: Biosystems & Biorobotics ((BIOSYSROB,volume 12))

Abstract

With exactly 302 neurons and about 8000 connections, the hermaphrodite of the soil-dwelling ringworm Caenorhabditis elegans features one of the simplest nervous systems in nature. The Si elegans project will provide a reverse-engineerable model of this nematode by emulating its nervous system and embodying it in a virtual world. The hardware will consist of 302 individual FPGAs, each carrying a neuron-specific neural response model. The FPGA neurons will be interconnected by an electro-optical connectome to distribute the signal at the axonal output or gap-junction pin of an FPGA neuron onto the respective synaptic input or gap-junction pins of postsynaptic FPGA neurons. This technology will replicate the known connectome of the nematode to allow for a biomimetic parallel information flow between neurons. This chapter focuses on the comparison of different electro-optical connectome concepts and on the required implementation steps with their advantages and disadvantages being explained.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Bhatla, N.: An Interactive Visualization of the C. elegans Neural Network (2009)

    Google Scholar 

  2. Chen, B.L., Hall, D.H., Chklovskii, D.B.: Wiring optimization can relate neuronal structure and function. Proc. Natl. Acad. Sci. USA 103, 4723–4728 (2006)

    Article  Google Scholar 

  3. Gütig, R.: To spike, or when to spike? Curr. Opin. Neurobiol. 25, 134–139 (2014)

    Article  Google Scholar 

  4. Kloppenburg, P., Nawrot Martin, P.: Neural coding: sparse but on time. Curr. Biol. 24, R957–R959 (2014)

    Google Scholar 

  5. Oshio, K., Iwasaki, Y., Morita, S., et al.: Database of synaptic connectivity of C. elegans for computation. Technical Report of CCeP, Keio Future. Keio University (2003)

    Google Scholar 

  6. Petrushin, A., Ferrara, L., Liberale, C., et al.: Towards an electro-optical emulation of the C. elegans connectome. In: Proceedings of the 2nd International Congress on Neurotechnology, Electronics and Informatics (NEUROTECHNIX). Rome, Italy, pp. 184–188 (2014)

    Google Scholar 

  7. Qian, J., Hintze, A., Adami, C.: Colored motifs reveal computational building blocks in the C. elegans brain. PLoS ONE 6, e17013 (2011)

    Article  Google Scholar 

  8. Ruvkun, G.: Patterning the nervous system, Chapter 20. In: Riddle, D., Blumenthal, T., Meyer, B. (eds.) C. elegans II. Cold Spring Harbor Laboratory Press, New York, pp. 543–581 (1997)

    Google Scholar 

  9. Stein, R.B., Gossen, E.R., Jones, K.E.: Neuronal variability: noise or part of the signal? Nat. Rev. Neurosci. 6, 389–397 (2005)

    Article  Google Scholar 

  10. Vanrullen, R., Guyonneau, R., Thorpe, S.J.: Spike times make sense. Trends Neurosci. 28, 1–4 (2005)

    Article  Google Scholar 

  11. Varshney, L.R., Chen, B.L., Paniagua, E., et al.: Structural properties of the Caenorhabditis elegans neuronal network. PLoS Comput. Biol. 7, e1001066 (2011)

    Google Scholar 

Download references

Acknowledgments

The Si elegans project 601215 is funded by the 7th Framework Programme (FP7) of the European Union under FET Proactive, call ICT-2011.9.11: Neuro-Bio-Inspired Systems (NBIS). We would like to thank David Evans and Duncan Turner from EBV as well as Noel Nevin, Rahiv Bhateja, Anisha Nanda and Stef Niewiadomski from Altera for fruitful discussions and sponsorship.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Axel Blau .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer International Publishing Switzerland

About this chapter

Cite this chapter

Ferrara, L. et al. (2016). Comparison of Electro-Optical Strategies for Mimicking C. elegans Network Interconnectivity in Hardware. In: Londral, A., Encarnação, P. (eds) Advances in Neurotechnology, Electronics and Informatics. Biosystems & Biorobotics, vol 12. Springer, Cham. https://doi.org/10.1007/978-3-319-26242-0_6

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-26242-0_6

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-26240-6

  • Online ISBN: 978-3-319-26242-0

  • eBook Packages: EngineeringEngineering (R0)

Publish with us

Policies and ethics