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Strong Inhomogeneity in Triplet Distribution Alongside a Genome

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Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 9044))

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Abstract

The distribution of triplets alongside a genome is studied. We explored the distribution to the nearest neighbour, that is the pattern where two triplets are fixed, and the distance is determined from the former to the latter so that the second triplet takes place nowhere inside the observed gap surrounded with the couple of the given triplets. The distribution differs strongly, for different organisms. Yeast and bacteria seem to have rather smooth pattern, while mammalia and other higher eukaryotes exhibit very complex patterns with long-range correlations in the triplet distribution.

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Sadovsky, M., Nikitina, X. (2015). Strong Inhomogeneity in Triplet Distribution Alongside a Genome. In: Ortuño, F., Rojas, I. (eds) Bioinformatics and Biomedical Engineering. IWBBIO 2015. Lecture Notes in Computer Science(), vol 9044. Springer, Cham. https://doi.org/10.1007/978-3-319-16480-9_25

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  • DOI: https://doi.org/10.1007/978-3-319-16480-9_25

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-16479-3

  • Online ISBN: 978-3-319-16480-9

  • eBook Packages: Computer ScienceComputer Science (R0)

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