Abstract
Chronic lung diseases are devastating diseases that are increasing in prevalence. Most have no cure and lung transplantation remains the only available therapeutic option. However, the number of suitable donor lungs is inadequate to meet current clinical demands and thus alternative options are desperately needed. There are a number of conceptually viable alternatives for generating functional pulmonary tissue ex vivo, including the use of either biologic or synthetic scaffolds coupled with an appropriate recellularization and ex vivo culture strategy. Biologic lung scaffolds have been generated using several different perfusion-based decellularization techniques. Whole organ decellularization aims to selectively remove cells while maintaining native tissue macro and microarchitecture. Alternatively, synthetic materials, coupled with advanced manufacturing techniques, could be used to generate a completely artificial scaffold with the necessary biologic properties to permit regeneration of functional lung tissue. Either a biologic or synthetic scaffold could then be subsequently recellularized with autologous cells, thus eradicating the immunological complications frequently accompanying organ transplantation. These approaches are a promising alternative to overcoming the chronic shortage of donor organs.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Abbreviations
- 2D:
-
Two-dimensional
- 3D:
-
Three-dimensional
- α-SMA:
-
Alpha smooth muscle actin
- A549:
-
Adenocarcinomic human alveolar basal epithelial cells
- A9:
-
Transformed subcutaneous murine fibroblasts
- AFM:
-
Atomic force microscopy
- ALI:
-
Air-liquid-interface
- ATI:
-
Type 1 alveolar epithelial cells
- ATII:
-
Type 2 alveolar epithelial cells
- Aqp5:
-
Aquaporin 5
- BMMSCs:
-
Porcine bone marrow-derived mesenchymal stem cells
- C10:
-
Immortalized murine alveolar epithelial cells
- CaCl2 :
-
Calcium chloride
- CBF12:
-
Human endothelial progenitor cells
- CC10:
-
Club Cell 10 kDa Protein (=CCSP)
- CCSP:
-
Club cell secretory protein (=CC10)
- CD:
-
Cluster of differentiation
- CD206:
-
Mannose receptor C 1 (cluster of differentiation factor 206)
- CHAPS:
-
3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate
- Ck:
-
Cytokeratin
- cmH2O:
-
Centimeters of water (pressure)
- Col1α1:
-
Collagen 1
- COPD:
-
Chronic obstructive pulmonary disease
- CT:
-
Computed tomography
- Ctnnb1:
-
Beta catenin
- DAPI:
-
4′,6-diamidino-2-phenylindole
- DMEM:
-
Dulbecco’s modified Eagle’s medium
- DNA:
-
Deoxyribonucleic acid
- DNase:
-
Deoxyribonuclease
- E17:
-
Embryonic day 17
- ECM:
-
Extracellular matrix
- EDTA:
-
Ethylenediaminetetracetic acid
- ESC:
-
Embryonic stem cells
- EVLP:
-
Ex vivo lung perfusion
- FBS:
-
Fetal bovine serum
- FDA:
-
Food and Drug Administration
- GAGS:
-
Glycosaminoglycans
- GFP:
-
Green fluorescent protein
- H&E:
-
Hematoxylin–eosin
- H2O:
-
Water
- hAEC:
-
Human alveolar epithelial cells
- hAT-MSC:
-
Human adipose-derived mesenchymal stem cells
- hBE:
-
Human bronchial epithelial cells
- hBM-MSC:
-
Human bone marrow-derived mesenchymal stem cells
- hFLC:
-
Human fetal lung cells
- hiPS:
-
Human induced pluripotent cells
- hLF:
-
Human lung fibroblasts
- hMSC:
-
Human bone marrow-derived mesenchymal stem cells
- HUVEC:
-
Human umbilical vein endothelial cells
- IPF:
-
Idiopathic pulmonary fibrosis
- iPS:
-
Induced pluripotent stem cells
- mESCs:
-
Murine embryonic stem cells
- MgSO4 :
-
Magnesium sulfate
- mM:
-
Millimolar
- mmHg:
-
Millimeters of mercury
- MRC5:
-
Human fetal lung fibroblast cell line
- MSC:
-
Mesenchymal stem cells
- NaCl:
-
Sodium chloride
- NaHCO3 :
-
Sodium bicarbonate
- Nkx2-1:
-
Nkx2 homeobox 1 protein (aka TTF1—thyroid transcription factor 1)
- PAEC:
-
Pulmonary alveolar epithelial cells
- PBS:
-
Phosphate-buffered saline
- PCR:
-
Polymerase chain reaction
- PDGFRα:
-
Platelet derived growth factor receptor alpha
- RGD:
-
Arg-Gly-Asp
- rhCHI3L1:
-
Recombinant human chitinase 3-like 1 protein
- RNase:
-
Ribonuclease
- SAEC:
-
Small airway epithelial cells
- SDC:
-
Sodium deoxycholate
- SDS:
-
Sodium dodecyl sulfate
- SEM:
-
Scanning electron microscopy
- SPA:
-
Surfactant protein A
- SPC:
-
Surfactant protein C
- TEM:
-
Transmission electron microscopy
- T1α:
-
T1alpha, podoplanin
- TGF-β:
-
Transforming growth factor beta
- Ttf-1:
-
Thyroid transcription factor 1 (Nkx2.1)
- VEGF:
-
Vascular endothelial growth factor
References
Andrade CF, Wong AP, Waddell TK, Keshavjee S, Liu M (2007) Cell-based tissue engineering for lung regeneration. Am J Physiol Lung Cell Mol Physiol 292(2):L510–L518
Badylak SF, Gilbert TW (2008) Immune response to biologic scaffold materials. Semin Immunol 20(2):109–116
Badylak SF, Weiss DJ, Caplan A, Macchiarini P (2012) Engineered whole organs and complex tissues. Lancet 379(9819):943–952
Baiguera S, Del Gaudio C, Jaus MO, Polizzi L, Gonfiotti A, Comin CE, Bianco A, Ribatti D, Taylor DA, Macchiarini P (2012) Long-term changes to in vitro preserved bioengineered human trachea and their implications for decellularized tissues. Biomaterials 33(14):3662–3672
Bauer CM, Zavitz CC, Botelho FM, Lambert KN, Brown EG, Mossman KL, Taylor JD, Stampfli MR (2010) Treating viral exacerbations of chronic obstructive pulmonary disease: insights from a mouse model of cigarette smoke and H1N1 influenza infection. PLoS One 5(10):e13251
Bonenfant NR, Sokocevic D, Wagner DE, Borg ZD, Lathrop MJ, Lam YW, Deng B, Desarno MJ, Ashikaga T, Loi R, Weiss DJ (2013) The effects of storage and sterilization on de-cellularized and re-cellularized whole lung. Biomaterials 34(13):3231–3245
Bonvillain RW, Danchuk S, Sullivan DE, Betancourt AM, Semon JA, Eagle ME, Mayeux JP, Gregory AN, Wang G, Townley IK, Borg ZD, Weiss DJ, Bunnell BA (2012) A nonhuman primate model of lung regeneration: detergent-mediated decellularization and initial in vitro recellularization with mesenchymal stem cells. Tissue Eng Part A 18(23–24):2437–2452
Booth AJ, Hadley R, Cornett AM, Dreffs AA, Matthes SA, Tsui JL, Weiss K, Horowitz JC, Fiore VF, Barker TH, Moore BB, Martinez FJ, Niklason LE, White ES (2012) Acellular normal and fibrotic human lung matrices as a culture system for in vitro investigation. Am J Respir Crit Care Med 186(9):866–876
Boudreault F, Tschumperlin DJ (2010) Stretch-induced mitogen-activated protein kinase activation in lung fibroblasts is independent of receptor tyrosine kinases. Am J Respir Cell Mol Biol 43(1):64–73
Brown BN, Valentin JE, Stewart-Akers AM, McCabe GP, Badylak SF (2009) Macrophage phenotype and remodeling outcomes in response to biologic scaffolds with and without a cellular component. Biomaterials 30(8):1482–1491
Brown BN, Londono R, Tottey S, Zhang L, Kukla KA, Wolf MT, Daly KA, Reing JE, Badylak SF (2012a) Macrophage phenotype as a predictor of constructive remodeling following the implantation of biologically derived surgical mesh materials. Acta Biomater 8(3):978–987
Brown BN, Ratner BD, Goodman SB, Amar S, Badylak SF (2012b) Macrophage polarization: an opportunity for improved outcomes in biomaterials and regenerative medicine. Biomaterials 33(15):3792–3802
Bruinsma BG, Yarmush ML, Uygun K (2014) Organomatics and organometrics: novel platforms for long-term whole-organ culture. Technology (Singap World Sci) 2(1):13
Bryant SJ, Cuy JL, Hauch KD, Ratner BD (2007) Photo-patterning of porous hydrogels for tissue engineering. Biomaterials 28(19):2978–2986
Bussek A, Wettwer E, Christ T, Lohmann H, Camelliti P, Ravens U (2009) Tissue slices from adult mammalian hearts as a model for pharmacological drug testing. Cell Physiol Biochem 24(5–6):527–536
Butler AJ, Rees MA, Wight DG, Casey ND, Alexander G, White DJ, Friend PJ (2002) Successful extracorporeal porcine liver perfusion for 72 hr. Transplantation 73(8):1212–1218
Camelliti P, Al-Saud SA, Smolenski RT, Al-Ayoubi S, Bussek A, Wettwer E, Banner NR, Bowles CT, Yacoub MH, Terracciano CM (2011) Adult human heart slices are a multicellular system suitable for electrophysiological and pharmacological studies. J Mol Cell Cardiol 51(3):390–398
Colom A, Galgoczy R, Almendros I, Xaubet A, Farre R, Alcaraz J (2014) Oxygen diffusion and consumption in extracellular matrix gels: implications for designing three-dimensional cultures. J Biomed Mater Res A 102(8):2776–2784
Cortiella J, Nichols JE, Kojima K, Bonassar LJ, Dargon P, Roy AK, Vacant MP, Niles JA, Vacanti CA (2006) Tissue-engineered lung: an in vivo and in vitro comparison of polyglycolic acid and pluronic F-127 hydrogel/somatic lung progenitor cell constructs to support tissue growth. Tissue Eng 12(5):1213–1225
Cortiella J, Niles J, Cantu A, Brettler A, Pham A, Vargas G, Winston S, Wang J, Walls S, Nichols JE (2010) Influence of acellular natural lung matrix on murine embryonic stem cell differentiation and tissue formation. Tissue Eng Part A 16(8):2565–2580
Crabbé A, Ledesma MA, Nickerson CA (2014) Mimicking the host and its microenvironment in vitro for studying mucosal infections by Pseudomonas aeruginosa. Pathog Dis 71(1):1–19
Crapo PM, Gilbert TW, Badylak SF (2011) An overview of tissue and whole organ decellularization processes. Biomaterials 32(12):3233–3243
Cypel M, Yeung JC, Liu M, Anraku M, Chen F, Karolak W, Sato M, Laratta J, Azad S, Madonik M, Chow CW, Chaparro C, Hutcheon M, Singer LG, Slutsky AS, Yasufuku K, de Perrot M, Pierre AF, Waddell TK, Keshavjee S (2011) Normothermic ex vivo lung perfusion in clinical lung transplantation. N Engl J Med 364(15):1431–1440
Daly AB, Wallis JM, Borg ZD, Bonvillain RW, Deng B, Ballif BA, Jaworski DM, Allen GB, Weiss DJ (2012a) Initial binding and recellularization of decellularized mouse lung scaffolds with bone marrow-derived mesenchymal stromal cells. Tissue Eng Part A 18(1–2):1–16
Daly KA, Liu S, Agrawal V, Brown BN, Johnson SA, Medberry CJ, Badylak SF (2012b) Damage associated molecular patterns within xenogeneic biologic scaffolds and their effects on host remodeling. Biomaterials 33(1):91–101
Dassow C, Wiechert L, Martin C, Schumann S, Muller-Newen G, Pack O, Guttmann J, Wall WA, Uhlig S (2010) Biaxial distension of precision-cut lung slices. J Appl Physiol 108(3):713–721
Davidovich N, Huang J, Margulies SS (2012) Reproducible uniform equibiaxial stretch of precision-cut lung slices. Am J Physiol Lung Cell Mol Physiol 304(4):L210–L220
Davidovich N, Chhour P, Margulies SS (2013) Uses of remnant human lung tissue for mechanical stretch studies. Cell Mol Bioeng 6(2):175–182
de Graaf IA, Olinga P, de Jager MH, Merema MT, de Kanter R, van de Kerkhof EG, Groothuis GM (2010) Preparation and incubation of precision-cut liver and intestinal slices for application in drug metabolism and toxicity studies. Nat Protoc 5(9):1540–1551
De Kanter R, Olinga P, De Jager MH, Merema MT, Meijer DK, Groothius GM (1999) Organ slices as an in vitro test system for drug metabolism in human liver, lung and kidney. Toxicol In Vitro 13(4–5):737–744
Delmotte P, Sanderson MJ (2006) Ciliary beat frequency is maintained at a maximal rate in the small airways of mouse lung slices. Am J Respir Cell Mol Biol 35(1):110–117
Dietl P, Liss B, Felder E, Miklavc P, Wirtz H (2010) Lamellar body exocytosis by cell stretch or purinergic stimulation: possible physiological roles, messengers and mechanisms. Cell Physiol Biochem 25(1):1–12
Douville NJ, Zamankhan P, Tung YC, Li R, Vaughan BL, Tai CF, White J, Christensen PJ, Grotberg JB, Takayama S (2011) Combination of fluid and solid mechanical stresses contribute to cell death and detachment in a microfluidic alveolar model. Lab Chip 11(4):609–619
Dunphy SE, Bratt JAJ, Akram KM, Forsyth NR, El Haj AJ (2014) Hydrogels for lung tissue engineering: biomechanical properties of thin collagen–elastin constructs. J Mech Behav Biomed Mater 38:251–259
Eisner MD, Anthonisen N, Coultas D, Kuenzli N, Perez-Padilla R, Postma D, Romieu I, Silverman EK, Balmes JR, Committee on Nonsmoking COPD, Environmental and Occupational Health Assembly (2010) An official American Thoracic Society public policy statement: novel risk factors and the global burden of chronic obstructive pulmonary disease. Am J Respir Crit Care Med 182(5):693–718
Ezzie ME, Crawford M, Cho JH, Orellana R, Zhang S, Gelinas R, Batte K, Yu L, Nuovo G, Galas D, Diaz P, Wang K, Nana-Sinkam SP (2012) Gene expression networks in COPD: microRNA and mRNA regulation. Thorax 67(2):122–131
Fernandes H, Mentink A, Bank R, Stoop R, van Blitterswijk C, de Boer J (2010) Endogenous collagen influences differentiation of human multipotent mesenchymal stromal cells. Tissue Eng Part A 16(5):1693–1702
Fischer SN, Johnson JK, Baran CP, Newland CA, Marsh CB, Lannutti JJ (2011) Organ-derived coatings on electrospun nanofibers as ex vivo microenvironments. Biomaterials 32(2):538–546
Fishman JM, De Coppi P, Elliott MJ, Atala A, Birchall MA, Macchiarini P (2011) Airway tissue engineering. Expert Opin Biol Ther 11(12):1623–1635
Fishman JM, Lowdell MW, Urbani L, Ansari T, Burns AJ, Turmaine M, North J, Sibbons P, Seifalian AM, Wood KJ, Birchall MA, De Coppi P (2013) Immunomodulatory effect of a decellularized skeletal muscle scaffold in a discordant xenotransplantation model. Proc Natl Acad Sci U S A 110(35):14360–14365
Flozak AS, Lam AP, Russell S, Jain M, Peled ON, Sheppard KA, Beri R, Mutlu GM, Budinger GR, Gottardi CJ (2010) Beta-catenin/T-cell factor signaling is activated during lung injury and promotes the survival and migration of alveolar epithelial cells. J Biol Chem 285(5):3157–3167
Franz S, Rammelt S, Scharnweber D, Simon JC (2011) Immune responses to implants—a review of the implications for the design of immunomodulatory biomaterials. Biomaterials 32(28):6692–6709
Garreta E, Melo E, Navajas D, Farré R (2014) Low oxygen tension enhances the generation of lung progenitor cells from mouse embryonic and induced pluripotent stem cells. Physiol Rep 2(7):e12075
Ghaedi M, Calle EA, Mendez JJ, Gard AL, Balestrini J, Booth A, Bove PF, Gui L, White ES, Niklason LE (2013) Human iPS cell-derived alveolar epithelium repopulates lung extracellular matrix. J Clin Invest 123(11):4950–4962
Ghaedi M, Mendez JJ, Bove PF, Sivarapatna A, Raredon MS, Niklason LE (2014) Alveolar epithelial differentiation of human induced pluripotent stem cells in a rotating bioreactor. Biomaterials 35(2):699–710
Gilpin SE, Guyette JP, Gonzalez G, Ren X, Asara JM, Mathisen DJ, Vacanti JP, Ott HC (2014) Perfusion decellularization of human and porcine lungs: bringing the matrix to clinical scale. J Heart Lung Transplant 33(3):298–308
Haag J, Baiguera S, Jungebluth P, Barale D, Del Gaudio C, Castiglione F, Bianco A, Comin CE, Ribatti D, Macchiarini P (2012) Biomechanical and angiogenic properties of tissue-engineered rat trachea using genipin cross-linked decellularized tissue. Biomaterials 33(3):780–789
Hammad S, Hoehme S, Friebel A, von Recklinghausen I, Othman A, Begher-Tibbe B, Reif R, Godoy P, Johann T, Vartak A, Golka K, Bucur PO, Vibert E, Marchan R, Christ B, Dooley S, Meyer C, Ilkavets I, Dahmen U, Dirsch O, Bottger J, Gebhardt R, Drasdo D, Hengstler JG (2014) Protocols for staining of bile canalicular and sinusoidal networks of human, mouse and pig livers, three-dimensional reconstruction and quantification of tissue microarchitecture by image processing and analysis. Arch Toxicol 88(5):1161–1183
Haykal S, Soleas JP, Salna M, Hofer SO, Waddell TK (2012) Evaluation of the structural integrity and extracellular matrix components of tracheal allografts following cyclical decellularization techniques: comparison of three protocols. Tissue Eng Part C Methods 18(8):614–623
Held HD, Martin C, Uhlig S (1999) Characterization of airway and vascular responses in murine lungs. Br J Pharmacol 126(5):1191–1199
Henjakovic M, Martin C, Hoymann HG, Sewald K, Ressmeyer AR, Dassow C, Pohlmann G, Krug N, Uhlig S, Braun A (2008a) Ex vivo lung function measurements in precision-cut lung slices (PCLS) from chemical allergen-sensitized mice represent a suitable alternative to in vivo studies. Toxicol Sci 106(2):444–453
Henjakovic M, Sewald K, Switalla S, Kaiser D, Muller M, Veres TZ, Martin C, Uhlig S, Krug N, Braun A (2008b) Ex vivo testing of immune responses in precision-cut lung slices. Toxicol Appl Pharmacol 231(1):68–76
Hinderer S, Schesny M, Bayrak A, Ibold B, Hampel M, Walles T, Stock UA, Seifert M, Schenke-Layland K (2012) Engineering of fibrillar decorin matrices for a tissue-engineered trachea. Biomaterials 33(21):5259–5266
Hogan Brigid LM, Barkauskas Christina E, Chapman Harold A, Epstein Jonathan A, Jain R, Hsia Connie CW, Niklason L, Calle E, Le A, Randell Scott H, Rock J, Snitow M, Krummel M, Stripp Barry R, Vu T, White Eric S, Whitsett Jeffrey A, Morrisey Edward E (2014) Repair and regeneration of the respiratory system: complexity, plasticity, and mechanisms of lung stem cell function. Cell Stem Cell 15(2):123–138
Huang Z, Wang Y, Nayak PS, Dammann CE, Sanchez-Esteban J (2012) Stretch-induced fetal type II cell differentiation is mediated via ErbB1-ErbB4 interactions. J Biol Chem 287(22):18091–18102
Huang SX, Islam MN, O’Neill J, Hu Z, Yang YG, Chen YW, Mumau M, Green MD, Vunjak-Novakovic G, Bhattacharya J, Snoeck HW (2014) Efficient generation of lung and airway epithelial cells from human pluripotent stem cells. Nat Biotechnol 32(1):84–91
Ingber DE (2006a) Cellular mechanotransduction: putting all the pieces together again. FASEB J 20(7):811–827
Ingber DE (2006b) Mechanical control of tissue morphogenesis during embryological development. Int J Dev Biol 50(2–3):255–266
Ingenito EP, Sen E, Tsai LW, Murthy S, Hoffman A (2010) Design and testing of biological scaffolds for delivering reparative cells to target sites in the lung. J Tissue Eng Regen Med 4(4):259–272
Ingenito EP, Tsai L, Murthy S, Tyagi S, Mazan M, Hoffman A (2012) Autologous lung-derived mesenchymal stem cell transplantation in experimental emphysema. Cell Transplant 21(1):175–189
Iwata T, Philipovskiy A, Fisher AJ, Presson RG Jr, Chiyo M, Lee J, Mickler E, Smith GN, Petrache I, Brand DB, Burlingham WJ, Gopalakrishnan B, Greenspan DS, Christie JD, Wilkes DS (2008) Anti-type V collagen humoral immunity in lung transplant primary graft dysfunction. J Immunol 181(8):5738–5747
Jensen T, Roszell B, Zang F, Girard E, Matson A, Thrall R, Jaworski DM, Hatton C, Weiss DJ, Finck C (2012) A rapid lung de-cellularization protocol supports embryonic stem cell differentiation in vitro and following implantation. Tissue Eng Part C Methods 18(8):632–646
Jungebluth P, Bader A, Baiguera S, Moller S, Jaus M, Lim ML, Fried K, Kjartansdottir KR, Go T, Nave H, Harringer W, Lundin V, Teixeira AI, Macchiarini P (2012a) The concept of in vivo airway tissue engineering. Biomaterials 33(17):4319–4326
Jungebluth P, Moll G, Baiguera S, Macchiarini P (2012b) Tissue-engineered airway: a regenerative solution. Clin Pharmacol Ther 91(1):81–93
Keane TJ, Badylak SF (2014) Biomaterials for tissue engineering applications. Semin Pediatr Surg 23(3):112–118
Krawiec JT, Vorp DA (2012) Adult stem cell-based tissue engineered blood vessels: a review. Biomaterials 33(12):3388–3400
Kuttan R, Spall RD, Duhamel RC, Sipes IG, Meezan E, Brendel K (1981) Preparation and composition of alveolar extracellular matrix and incorporated basement membrane. Lung 159(6):333–345
Liberati TA, Randle MR, Toth LA (2010) In vitro lung slices: a powerful approach for assessment of lung pathophysiology. Expert Rev Mol Diagn 10(4):501–508
Lin YM, Boccaccini AR, Polak JM, Bishop AE, Maquet V (2006) Biocompatibility of poly-DL-lactic acid (PDLLA) for lung tissue engineering. J Biomater Appl 21(2):109–118
Lin YM, Zhang A, Rippon HJ, Bismarck A, Bishop AE (2010) Tissue engineering of lung: the effect of extracellular matrix on the differentiation of embryonic stem cells to pneumocytes. Tissue Eng Part A 16(5):1515–1526
Ling T-Y, Liu Y-L, Huang Y-K, Gu S-Y, Chen H-K, Ho C-C, Tsao P-N, Tung Y-C, Chen H-W, Cheng C-H, Lin K-H, Lin F-H (2014) Differentiation of lung stem/progenitor cells into alveolar pneumocytes and induction of angiogenesis within a 3D gelatin—microbubble scaffold. Biomaterials 35(22):5660–5669
Longmire TA, Ikonomou L, Hawkins F, Christodoulou C, Cao Y, Jean JC, Kwok LW, Mou H, Rajagopal J, Shen SS, Dowton AA, Serra M, Weiss DJ, Green MD, Snoeck HW, Ramirez MI, Kotton DN (2012) Efficient derivation of purified lung and thyroid progenitors from embryonic stem cells. Cell Stem Cell 10(4):398–411
Lopez AD, Shibuya K, Rao C, Mathers CD, Hansell AL, Held LS, Schmid V, Buist S (2006) Chronic obstructive pulmonary disease: current burden and future projections. Eur Respir J 27(2):397–412
Lwebuga-Mukasa JS, Ingbar DH, Madri JA (1986) Repopulation of a human alveolar matrix by adult rat type II pneumocytes in vitro. A novel system for type II pneumocyte culture. Exp Cell Res 162(2):423–435
Macchiarini P, Jungebluth P, Go T, Asnaghi MA, Rees LE, Cogan TA, Dodson A, Martorell J, Bellini S, Parnigotto PP, Dickinson SC, Hollander AP, Mantero S, Conconi MT, Birchall MA (2008) Clinical transplantation of a tissue-engineered airway. Lancet 372(9655):2023–2030
Majumdar A, Arold SP, Bartolak-Suki E, Parameswaran H, Suki B (2012) Jamming dynamics of stretch-induced surfactant release by alveolar type II cells. J Appl Physiol 112(5):824–831
Mariani TJ, Sandefur S, Pierce RA (1997) Elastin in lung development. Exp Lung Res 23(2):131–145
Marquardt A, Halle S, Seckert CK, Lemmermann NA, Veres TZ, Braun A, Maus UA, Forster R, Reddehase MJ, Messerle M, Busche A (2011) Single cell detection of latent cytomegalovirus reactivation in host tissue. J Gen Virol 92(Pt 6):1279–1291
Martin C, Uhlig S, Ullrich V (1996) Videomicroscopy of methacholine-induced contraction of individual airways in precision-cut lung slices. Eur Respir J 9(12):2479–2487
McAnulty JF, Ploeg RJ, Southard JH, Belzer FO (1989) Successful five-day perfusion preservation of the canine kidney. Transplantation 47(1):37–41
McBride S, Rannie D, Harrison DJ (2000) Gene transfer to adult human lung tissue ex vivo. Gene Ther 7(8):675–678
Melchels FPW, Domingos MAN, Klein TJ, Malda J, Bartolo PJ, Hutmacher DW (2012) Additive manufacturing of tissues and organs. Prog Polym Sci 37(8):1079–1104
Melo E, Cardenes N, Garreta E, Luque T, Rojas M, Navajas D, Farre R (2014a) Inhomogeneity of local stiffness in the extracellular matrix scaffold of fibrotic mouse lungs. J Mech Behav Biomed Mater 37:186–195
Melo E, Garreta E, Luque T, Cortiella J, Nichols J, Navajas D, Farre R (2014b) Effects of the decellularization method on the local stiffness of acellular lungs. Tissue Eng Part C Methods 20(5):412–422
Mendez JJ, Ghaedi M, Steinbacher D, Niklason LE (2014) Epithelial cell differentiation of human mesenchymal stromal cells in decellularized lung scaffolds. Tissue Eng Part A 20:1735–1746
Miller C, George S, Niklason L (2010) Developing a tissue-engineered model of the human bronchiole. J Tissue Eng Regen Med 4(8):619–627
Mishra DK, Thrall MJ, Baird BN, Ott HC, Blackmon SH, Kurie JM, Kim MP (2012) Human lung cancer cells grown on acellular rat lung matrix create perfusable tumor nodules. Ann Thorac Surg 93(4):1075–1081
Mondrinos MJ, Koutzaki S, Jiwanmall E, Li M, Dechadarevian JP, Lelkes PI, Finck CM (2006) Engineering three-dimensional pulmonary tissue constructs. Tissue Eng 12(4):717–728
Mondrinos MJ, Koutzaki S, Lelkes PI, Finck CM (2007) A tissue-engineered model of fetal distal lung tissue. Am J Physiol Lung Cell Mol Physiol 293(3):L639–L650
Moreno L, Perez-Vizcaino F, Harrington L, Faro R, Sturton G, Barnes PJ, Mitchell JA (2006) Pharmacology of airways and vessels in lung slices in situ: role of endogenous dilator hormones. Respir Res 7:111
Morin JP, Baste JM, Gay A, Crochemore C, Corbiere C, Monteil C (2013) Precision cut lung slices as an efficient tool for in vitro lung physio-pharmacotoxicology studies. Xenobiotica 43(1):63–72
Morrisey EE, Hogan BLM (2010) Preparing for the first breath: genetic and cellular mechanisms in lung development. Dev Cell 18(1):8–23
Murphy SV, Atala A (2014) 3D bioprinting of tissues and organs. Nat Biotechnol 32(8):773–785
Nakayama KH, Lee CCI, Batchelder CA, Tarantal AF (2013) Tissue specificity of decellularized rhesus monkey kidney and lung scaffolds. PLoS One 8(5):e64134
Nguyen NM, Senior RM (2006) Laminin isoforms and lung development: all isoforms are not equal. Dev Biol 294(2):271–279
Nguyen DT, de Vries RD, Ludlow M, van den Hoogen BG, Lemon K, van Amerongen G, Osterhaus AD, de Swart RL, Duprex WP (2013) Paramyxovirus infections in ex vivo lung slice cultures of different host species. J Virol Methods 193(1):159–165
Nichols JE, Cortiella J (2008) Engineering of a complex organ: progress toward development of a tissue-engineered lung. Proc Am Thorac Soc 5(6):723–730
Nichols JE, Niles J, Riddle M, Vargas G, Schilagard T, Ma L, Edward K, La Francesca S, Sakamoto J, Vega S, Ogadegbe M, Mlcak R, Deyo D, Woodson L, McQuitty C, Lick S, Beckles D, Melo E, Cortiella J (2013) Production and assessment of decellularized pig and human lung scaffolds. Tissue Eng Part A 19(17–18):2045–2062
Nonaka PN, Uriarte JJ, Campillo N, Melo E, Navajas D, Farre R, Oliveira LV (2014) Mechanical properties of mouse lungs along organ decellularization by sodium dodecyl sulfate. Respir Physiol Neurobiol 200:1–5
O’Neill JD, Anfang R, Anandappa A, Costa J, Javidfar J, Wobma HM, Singh G, Freytes DO, Bacchetta MD, Sonett JR, Vunjak-Novakovic G (2013) Decellularization of human and porcine lung tissues for pulmonary tissue engineering. Ann Thorac Surg 96(3):1046–1055, discussion 1055–1046
op den Dries S, Karimian N, Sutton ME, Westerkamp AC, Nijsten MW, Gouw AS, Wiersema-Buist J, Lisman T, Leuvenink HG, Porte RJ (2013) Ex vivo normothermic machine perfusion and viability testing of discarded human donor livers. Am J Transplant 13(5):1327–1335
Orlando G, Baptista P, Birchall M, De Coppi P, Farney A, Guimaraes-Souza NK, Opara E, Rogers J, Seliktar D, Shapira-Schweitzer K, Stratta RJ, Atala A, Wood KJ, Soker S (2011) Regenerative medicine as applied to solid organ transplantation: current status and future challenges. Transpl Int 24(3):223–232
Ott HC, Matthiesen TS, Goh SK, Black LD, Kren SM, Netoff TI, Taylor DA (2008) Perfusion-decellularized matrix: using nature’s platform to engineer a bioartificial heart. Nat Med 14(2):213–221
Ott HC, Clippinger B, Conrad C, Schuetz C, Pomerantseva I, Ikonomou L, Kotton D, Vacanti JP (2010) Regeneration and orthotopic transplantation of a bioartificial lung. Nat Med 16(8):927–933
Parker MW, Rossi D, Peterson M, Smith K, Sikström K, White ES, Connett JE, Henke CA, Larsson O, Bitterman PB (2014) Fibrotic extracellular matrix activates a profibrotic positive feedback loop. J Clin Invest 124(4):1622–1635
Parrish AR, Gandolfi AJ, Brendel K (1995) Precision-cut tissue slices: applications in pharmacology and toxicology. Life Sci 57(21):1887–1901
Petersen TH, Calle EA, Zhao L, Lee EJ, Gui L, Raredon MB, Gavrilov K, Yi T, Zhuang ZW, Breuer C, Herzog E, Niklason LE (2010) Tissue-engineered lungs for in vivo implantation. Science 329(5991):538–541
Petersen TH, Calle EA, Colehour MB, Niklason LE (2011) Bioreactor for the long-term culture of lung tissue. Cell Transplant 20(7):1117–1126
Petersen TH, Calle EA, Colehour MB, Niklason LE (2012) Matrix composition and mechanics of decellularized lung scaffolds. Cells Tissues Organs 195(3):222–231
Pilaz LJ, Silver DL (2014) Live imaging of mitosis in the developing mouse embryonic cortex. J Vis Exp (88). doi:10.3791/51298
Price AP, England KA, Matson AM, Blazar BR, Panoskaltsis-Mortari A (2010) Development of a decellularized lung bioreactor system for bioengineering the lung: the matrix reloaded. Tissue Eng Part A 16(8):2581–2591
Price AP, Godin LM, Domek A, Cotter T, D’Cunha J, Taylor DA, Panoskaltsis-Mortari A (2015) Automated decellularization of intact, human-sized lungs for tissue engineering. Tissue Eng Part C Methods 21(1):94–103
Rausch SM, Haberthur D, Stampanoni M, Schittny JC, Wall WA (2011) Local strain distribution in real three-dimensional alveolar geometries. Ann Biomed Eng 39(11):2835–2843
Ressmeyer AR, Larsson AK, Vollmer E, Dahlen SE, Uhlig S, Martin C (2006) Characterisation of guinea pig precision-cut lung slices: comparison with human tissues. Eur Respir J 28(3):603–611
Rice WL, Van Hoek AN, Paunescu TG, Huynh C, Goetze B, Singh B, Scipioni L, Stern LA, Brown D (2013) High resolution helium ion scanning microscopy of the rat kidney. PLoS One 8(3):e57051
Rippon HJ, Polak JM, Qin M, Bishop AE (2006) Derivation of distal lung epithelial progenitors from murine embryonic stem cells using a novel three-step differentiation protocol. Stem Cells 24(5):1389–1398
Roomans GM (2010) Tissue engineering and the use of stem/progenitor cells for airway epithelium repair. Eur Cell Mater 19:284–299
Sanchez-Esteban J, Tsai SW, Sang J, Qin J, Torday JS, Rubin LP (1998) Effects of mechanical forces on lung-specific gene expression. Am J Med Sci 316(3):200–204
Sanchez-Esteban J, Cicchiello LA, Wang Y, Tsai SW, Williams LK, Torday JS, Rubin LP (2001) Mechanical stretch promotes alveolar epithelial type II cell differentiation. J Appl Physiol 91(2):589–595
Sanderson MJ (2011) Exploring lung physiology in health and disease with lung slices. Pulm Pharmacol Ther 24(5):452–465
Satoh K, Takahashi G, Miura T, Hayakari M, Hatayama I (2005) Enzymatic detection of precursor cell populations of preneoplastic foci positive for gamma-glutamyltranspeptidase in rat liver. Int J Cancer 115(5):711–716
Schleputz M, Uhlig S, Martin C (2011) Electric field stimulation of precision-cut lung slices. J Appl Physiol 110(2):545–554
Schleputz M, Rieg AD, Seehase S, Spillner J, Perez-Bouza A, Braunschweig T, Schroeder T, Bernau M, Lambermont V, Schlumbohm C, Sewald K, Autschbach R, Braun A, Kramer BW, Uhlig S, Martin C (2012) Neurally mediated airway constriction in human and other species: a comparative study using precision-cut lung slices (PCLS). PLoS One 7(10):e47344
Schnorbusch K, Lembrechts R, Brouns I, Pintelon I, Timmermans JP, Adriaensen D (2012) Precision-cut vibratome slices allow functional live cell imaging of the pulmonary neuroepithelial body microenvironment in fetal mice. Adv Exp Med Biol 758:157–166
Seehase S, Schleputz M, Switalla S, Matz-Rensing K, Kaup FJ, Zoller M, Schlumbohm C, Fuchs E, Lauenstein HD, Winkler C, Kuehl AR, Uhlig S, Braun A, Sewald K, Martin C (2011) Bronchoconstriction in non-human primates: a species comparison. J Appl Physiol 111:791–798
Shamis Y, Hasson E, Soroker A, Bassat E, Shimoni Y, Ziv T, Sionov RV, Mitrani E (2011) Organ-specific scaffolds for in vitro expansion, differentiation, and organization of primary lung cells. Tissue Eng Part C Methods 17(8):861–870
Shaw AS, Filbert EL (2009) Scaffold proteins and immune-cell signalling. Nat Rev Immunol 9(1):47–56
Shim K (2011) Vibratome sectioning for enhanced preservation of the cytoarchitecture of the mammalian organ of Corti. J Vis Exp (52). pii: 2793. doi:10.3791/2793
Shweiki D, Itin A, Soffer D, Keshet E (1992) Vascular endothelial growth factor induced by hypoxia may mediate hypoxia-initiated angiogenesis. Nature 359(6398):843–845
Simon MC, Keith B (2008) The role of oxygen availability in embryonic development and stem cell function. Nat Rev Mol Cell Biol 9(4):285–296
Smith PF, Gandolfi AJ, Krumdieck CL, Putnam CW, Zukoski CF III, Davis WM, Brendel K (1985) Dynamic organ culture of precision liver slices for in vitro toxicology. Life Sci 36(14):1367–1375
Sokocevic D, Bonenfant NR, Wagner DE, Borg ZD, Lathrop MJ, Lam YW, Deng B, Desarno MJ, Ashikaga T, Loi R, Hoffman AM, Weiss DJ (2013) The effect of age and emphysematous and fibrotic injury on the re-cellularization of de-cellularized lungs. Biomaterials 34(13):3256–3269
Song JJ, Kim SS, Liu Z, Madsen JC, Mathisen DJ, Vacanti JP, Ott HC (2011) Enhanced in vivo function of bioartificial lungs in rats. Ann Thorac Surg 92(3):998–1005, discussion 1005–1006
Sun H, Calle E, Chen X, Mathur A, Zhu Y, Mendez J, Zhao L, Niklason L, Peng X, Peng H, Herzog EL (2014) Fibroblast engraftment in the decellularized mouse lung occurs via a beta1-integrin-dependent, FAK-dependent pathway that is mediated by ERK and opposed by AKT. Am J Physiol Lung Cell Mol Physiol 306(6):L463–L475
Totonelli G, Maghsoudlou P, Garriboli M, Riegler J, Orlando G, Burns AJ, Sebire NJ, Smith VV, Fishman JM, Ghionzoli M, Turmaine M, Birchall MA, Atala A, Soker S, Lythgoe MF, Seifalian A, Pierro A, Eaton S, De Coppi P (2012) A rat decellularized small bowel scaffold that preserves villus-crypt architecture for intestinal regeneration. Biomaterials 33(12):3401–3410
Tsunooka N, Hirayama S, Medin JA, Liles WC, Keshavjee S, Waddell TK (2011) A novel tissue-engineered approach to problems of the postpneumonectomy space. Ann Thorac Surg 91(3):880–886
Vaira V, Fedele G, Pyne S, Fasoli E, Zadra G, Bailey D, Snyder E, Faversani A, Coggi G, Flavin R, Bosari S, Loda M (2010) Preclinical model of organotypic culture for pharmacodynamic profiling of human tumors. Proc Natl Acad Sci U S A 107(18):8352–8356
Wagner DE, Bonvillain RW, Jensen T, Girard ED, Bunnell BA, Finck CM, Hoffman AM, Weiss DJ (2013) Can stem cells be used to generate new lungs? Ex vivo lung bioengineering with decellularized whole lung scaffolds. Respirology 18(6):895–911
Wagner DE, Bonenfant NR, Parsons CS, Sokocevic D, Brooks EM, Borg ZD, Lathrop MJ, Wallis JD, Daly AB, Lam YW, Deng B, DeSarno MJ, Ashikaga T, Loi R, Weiss DJ (2014a) Comparative decellularization and recellularization of normal versus emphysematous human lungs. Biomaterials 35(10):3281–3297
Wagner DE, Bonenfant NR, Sokocevic D, DeSarno MJ, Borg ZD, Parsons CS, Brooks EM, Platz JJ, Khalpey ZI, Hoganson DM, Deng B, Lam YW, Oldinski RA, Ashikaga T, Weiss DJ (2014b) Three-dimensional scaffolds of acellular human and porcine lungs for high throughput studies of lung disease and regeneration. Biomaterials 35(9):2664–2679
Wagner DE, Fenn S, Bonenfant N, Marks E, Borg Z, Saunders P, Oldinski R, Weiss D (2014c) Design and synthesis of an artificial pulmonary pleura for high throughput studies in acellular human lungs. Cell Mol Bioeng 7(2):184–195
Wallis JM, Borg ZD, Daly AB, Deng B, Ballif BA, Allen GB, Jaworski DM, Weiss DJ (2012) Comparative assessment of detergent-based protocols for mouse lung de-cellularization and re-cellularization. Tissue Eng Part C Methods 18(6):420–432
Wang H, Zhu J, Akkin T (2014) Serial optical coherence scanner for large-scale brain imaging at microscopic resolution. Neuroimage 84:1007–1017
Weibel ER (2013) It takes more than cells to make a good lung. Am J Respir Crit Care Med 187(4):342–346
Wertheim JA, Baptista PM, Soto-Gutierrez A (2012) Cellular therapy and bioartificial approaches to liver replacement. Curr Opin Organ Transplant 17(3):235–240
Wohlsen A, Martin C, Vollmer E, Branscheid D, Magnussen H, Becker WM, Lepp U, Uhlig S (2003) The early allergic response in small airways of human precision-cut lung slices. Eur Respir J 21(6):1024–1032
Wright JL, Churg A (2008) Short-term exposure to cigarette smoke induces endothelial dysfunction in small intrapulmonary arteries: analysis using guinea pig precision cut lung slices. J Appl Physiol 104(5):1462–1469
Wyatt TA, Sisson JH, Allen-Gipson DS, McCaskill ML, Boten JA, DeVasure JM, Bailey KL, Poole JA (2012) Co-exposure to cigarette smoke and alcohol decreases airway epithelial cell cilia beating in a protein kinase C epsilon-dependent manner. Am J Pathol 181(2):431–440
Zhou J, Alvarez-Elizondo MB, Botvinick E, George SC (2012) Local small airway epithelial injury induces global smooth muscle contraction and airway constriction. J Appl Physiol 112(4):627–637
Zhou Y, Peng H, Sun H, Peng X, Tang C, Gan Y, Chen X, Mathur A, Hu B, Slade MD, Montgomery RR, Shaw AC, Homer RJ, White ES, Lee C-M, Moore MW, Gulati M, Geun Lee C, Elias JA, Herzog EL (2014) Chitinase 3-like 1 suppresses injury and promotes fibroproliferative responses in mammalian lung fibrosis. Sci Transl Med 6(240):240ra276
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer International Publishing Switzerland
About this chapter
Cite this chapter
Wagner, D.E., Uhl, F.E., Königshoff, M., Weiss, D.J. (2015). Ex Vivo Lung Bioengineering. In: Firth, A., Yuan, JJ. (eds) Lung Stem Cells in the Epithelium and Vasculature. Stem Cell Biology and Regenerative Medicine. Springer, Cham. https://doi.org/10.1007/978-3-319-16232-4_8
Download citation
DOI: https://doi.org/10.1007/978-3-319-16232-4_8
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-16231-7
Online ISBN: 978-3-319-16232-4
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)