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Nonparametric Prediction and Supervised Classification for Spatial Dependent Functional Data Under Fixed Sampling Design

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Nonlinear Analysis, Geometry and Applications

Abstract

Fisheries science has been trying to identify the best way to analyze and predict fish biomass and its spatial distribution since several decades using, among others, kirigng model, co-kiriging model, Species Distribution Modeling and Joined Species Distribution Modeling, based on conventional statistical methods as Generalized Linear Models and Generalized Additive Models, with contested results. We consider a bio-ecological issue applying a non parametric spatial prediction based on a spatio-functional regression models, in a fixed design sampling context, as a supervised classification method when the variable of interest belongs to a predefined class set. The proposed predictor takes into account the spatial fish distribution and environmental variable such as salinity and temperature. The development of the method depends on two kernels to control both interactions between observations and locations. The results show that this nonparametric spatial functional supervised classification method is an efficient tool applied to predict spatial distribution of demersal coastal fish off Senegal.

To all my supervisor and fee supports: Sophie DABO-NIANG, Papa NGOM and Patrice Brehmer.

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Notes

  1. 1.

    Is a medium-sized species of scallop, an edible marine bivalve mollusk in the family Pectinidae, the scallops. It is found in the northeast Atlantic and is important in fisheries.

References

  1. Ahmed, M.S., N’diaye, M., Attouch, M.K., Dabo-Niange, S.: k-nearest neighbors prediction and classification for spatial data. J. Spatial Econ. 4(1), 12 (2023)

    Google Scholar 

  2. Akia, S., Amandé, M., Pascual, P., Gaertner, D.: Seasonal and inter-annual variability in abundance of the main tropical tunas in the EEZ of côte d’ivoire (2000–2019). Fish. Res. 243, 106053 (2021)

    Article  Google Scholar 

  3. Aura, C.M., Anam, R.O., Musa, S., Kimani, E.N.: The length-weight relationship and condition factor (k constant) of the sparidae (dentex marocannus, valenciennes 1830) of malindi, Kenya. Western Ind. Ocean J. Marine Sci. 12(1), 79–83 (2013)

    Google Scholar 

  4. Baladandayuthapani, V., Mallick, B.K., Hong, M.Y., Lupton, J.R., Turner, n.d., Carroll, R.J.: Bayesian hierarchical spatially correlated functional data analysis with application to colon carcinogenesis. Biometrics 64(1), 64–73 (2007)

    Google Scholar 

  5. Bande, M.F., de la Fuente, M.O., Galeano, P., Nieto, A., Garcia-Portugues, E., de la Fuente, M.M.O.: Package ‘fda. usc’ (2019)

    Google Scholar 

  6. Bosq, D.: Nonparametric Statistics for Stochastic Processes: Estimation and Prediction. Lecture Notes in Statistics, vol. 110, 2nd edn. Springer, New York (1998)

    Google Scholar 

  7. Boudreault, J., St-Hilaire, A., Chebana, F., Bergeron, N.E.: Modelling fish physico-thermal habitat selection using functional regression. J. Ecohydraulics 6(2), 105–120 (2021)

    Article  Google Scholar 

  8. Boumeddane, S., Hamdad, L., Haddadou, H., Dabo-Niang, S.: A kernel discriminant analysis for spatially dependent data. Distrib. Parallel Databases 39(3), 583–606 (2021)

    Article  Google Scholar 

  9. Carbon, M., Tran, L.T., Wu, B.: Kernel density estimation for random fields. Stat. Probab. Lett. 36(2), 115–125 (1997)

    Article  Google Scholar 

  10. Cayre, P., Fontana, A.: [deep sea stocks [shrimps (parapenaeus longirostris, aristeus viridens, plesiopenaeus edwardsianus), sea bream (dentex angolensis), hakes (merluccius polli), squids (loligo sp., sepia officinalis), crabs (geryon quinquedens)]]. Travaux et Documents de l’ORSTOM (France) (1981)

    Google Scholar 

  11. Chen, Y., Liu, S., Shan, X., Wang, H., Li, B., Yang, J., Dai, L., Liu, J., Li, G.: Schistosoma japonicum-infected sentinel mice: surveillance and spatial point pattern analysis in Hubei province, China, 2010–2018. Int. J. Infect. Diseases 99, 179–185 (2020)

    Article  Google Scholar 

  12. Cressie, N.A.C.: Statistics for Spatial Data. Wiley Series in Probability and Statistics, vol. 110, rev. edn. Wiley, Hoboken (1993)

    Google Scholar 

  13. Cuesta-Albertos, J.A., Febrero-Bande, M., de la Fuente, M.O.: The \(dd^{G} \)-classifier in the functional setting. Test 26(1), 119–142 (2017)

    Google Scholar 

  14. Currie, J.C., Thorson, J.T., Sink, K.J., Atkinson, L.J., Fairweather, T.P., Winker, H.: A novel approach to assess distribution trends from fisheries survey data. Fish. Res. 214, 98–109 (2019)

    Article  Google Scholar 

  15. Dabo-Niang, S., Ternynck, C., Yao, A.F.: Nonparametric prediction of spatial multivariate. Nonparametric Stat. 2, 428–458 (2016)

    Article  MathSciNet  Google Scholar 

  16. Dabo-Niang, S., Rachdi, M., Yao, A.F.: Kernel regression estimation for spatial functional random variables. Far East J. Theor. Stat. 37(2), 77–113 (2011)

    MathSciNet  Google Scholar 

  17. Dabo-Niang, S., Yao, A.F.: Kernel spatial density estimation in infinite dimension space. Metrika 76(1), 19–52 (2013)

    Article  MathSciNet  Google Scholar 

  18. Damasio, L.M.A., Peninno, M.G., Lopes, P.F.M.: Small changes, big impacts: geographic expansion in small-scale fisheries. Fish. Res. 226, 105533 (2020)

    Article  Google Scholar 

  19. Devroye, L., Gyorfi, L., Krzyzak, A., Lugosi, G.: On the strong universal consistency of nearest neighbor regression function estimates. Ann. Stat. 22, 1371–1385 (1994)

    Article  MathSciNet  Google Scholar 

  20. Devroye, L., Wagner, T.J.: 8 nearest neighbor methods in discrimination. In: Handbook of Statistics (1982)

    Google Scholar 

  21. Dillon, R.A., Conroy, J.D., Rudstam, L.G., Craigmile, P.F., Mason, D.M., Ludsin, S.A.: Towards more robust hydroacoustic estimates of fish abundance in the presence of pelagic macroinvertebrates. Fish. Res. 230, 105667 (2020)

    Article  Google Scholar 

  22. El Machkouri, M.: Nonparametric regression estimation for random fields in a fixed-design. Stat. Inference Stoch. Process. 10(1), 29–47 (2007)

    Article  MathSciNet  Google Scholar 

  23. El Machkouri, M., Stoica, R.: Asymptotic normality of kernel estimates in a regression model for random fields. J. Nonparametr. Stat. 22(8), 955–971 (2010)

    Article  MathSciNet  Google Scholar 

  24. El Machkouri, M.: Asymptotic normality of the Parzen–Rosenblatt density estimator for strongly mixing random fields. Stat. Infer. Stoch. Process. 14(1), 73–84 (2011)

    Article  MathSciNet  Google Scholar 

  25. Febrero, M., Galeano, P., González-Manteiga, W.: A functional analysis of nox levels: location and scale estimation and outlier detection. Comput. Stat. 22, 411–427 (2007)

    Article  MathSciNet  Google Scholar 

  26. Febrero, M., Galeano, P., González-Manteiga, W.: Outlier detection in functional data by depth measures, with application to identify abnormal nox levels. Environ. Official J. Int. Environ. Soc. 19(4), 331–345 (2008)

    Google Scholar 

  27. Feng, Y., Yao, L., Zhao, H., Yu, J., Lin, Z.: Environmental effects on the spatiotemporal variability of fish larvae in the western guangdong waters, China. J. Marine Sci. Eng. 9(3), 316 (2021)

    Article  Google Scholar 

  28. Ferraty, F., Vieu, P.: Nonparametric Functional Data Analysis: Theory and Practice. Springer Series in Statistics. Springer, Berlin (2006)

    Google Scholar 

  29. Gonzalez, G.M., Wiff, R., Marshall, C.T., Cornulier, T.: Estimating spatio-temporal distribution of fish and gear selectivity functions from pooled scientific survey and commercial fishing data. Fish. Res. 243, 106054 (2021)

    Article  Google Scholar 

  30. Hallin, M., Lu, Z., Tran, L.T.: Local linear spatial regression. Ann. Stat. 32(6), 2469–2500 (2004)

    Article  MathSciNet  Google Scholar 

  31. Hermosilla, C., Rocha, F., Valavanis, V.D.: Assessing octopus vulgaris distribution using presence-only model methods. Hydrobiologia 670(1), 35–47 (2011)

    Article  Google Scholar 

  32. Jiménez-Cordero, A., Maldonado, S.: Automatic feature scaling and selection for support vector machine classification with functional data. Appl. Intell. 51(1), 161–184 (2021)

    Article  Google Scholar 

  33. Kanamori, Y., Nishijima, S., Okamura, H., Yukami, R., Watai, M., Takasuka, A.: Spatio-temporal model reduces species misidentification bias of spawning eggs in stock assessment of spotted mackerel in the western north pacific. Fish. Res. 236, 105825 (2021)

    Article  Google Scholar 

  34. Katsanevakis, S., Verriopoulos, G.: Abundance of octopus vulgaris on soft sediment. Sci. Marina 68(4), 553–560 (2004)

    Article  Google Scholar 

  35. Katsanevakis, S., Verriopoulos, G.: Den ecology of octopus vulgaris cuvier, 1797, on soft sediment: availability and types of shelter. Sci. Marina 68(1), 147–157 (2004)

    Article  Google Scholar 

  36. Klemelä, J.: Density estimation with locally identically distributed data and with locally stationary data. J. Time Ser. Anal. 29(1), 125–141 (2008)

    Article  MathSciNet  Google Scholar 

  37. Kuenzer, T., Hrmann, S., Kokoszka, P.: Principal component analysis of spatially indexed functions. J. Am. Stat. Assoc. 116(535), 1444–1456 (2020)

    Article  MathSciNet  Google Scholar 

  38. Lefort, R., Fablet, R., Berger, L., Boucher, J.M.: Spatial statistics of objects in 3-d sonar images: application to fisheries acoustics. IEEE Geosci. Remote Sens. Lett. 9(1), 56–59 (2011)

    Article  Google Scholar 

  39. Luan, J., Zhang, C., Xu, B., Xue, Y., Ren, Y.: Modelling the spatial distribution of three portunidae crabs in haizhou bay, China. PloS One 13(11), e0207457 (2018)

    Article  Google Scholar 

  40. Masry, E.: Nonparametric regression estimation for dependent functional data: asymptotic normality. Stoch. Process. Appl. 115(1), 155–177 (2005)

    Article  MathSciNet  Google Scholar 

  41. Mesquita, C., Dobby, H., Pierce, G.J., Jones, C.S., Fernandes, P.G.: Abundance and spatial distribution of brown crab (cancer pagurus) from fishery-independent dredge and trawl surveys in the north sea. ICES J. Marine Sci. 78(2), 597–610 (2021)

    Article  Google Scholar 

  42. Mormede, S., Parker, S.J., Pinkerton, M.H.: Comparing spatial distribution modelling of fisheries data with single-area or spatially-explicit integrated population models, a case study of toothfish in the ross sea region. Fish. Res. 221, 105381 (2020)

    Article  Google Scholar 

  43. Ndiaye, M., Dabo-Niang, S., Ngom, P.: Nonparametric prediction for spatial dependent functional data under fixed sampling design. Rev. Colombiana Estad. 45(2), 391–428 (2022)

    Article  MathSciNet  Google Scholar 

  44. Ndiaye, M., Dabo-Niang, S., Ngom, P., Thiam, N., Fall, M., Brehmer, P.: Nonparametric prediction for spatial dependent functional data: application to demersal coastal fish off senegal. Math. Model. Random Deterministic Phenom. 31–51 (2020). https://doi.org/10.1002/9781119706922

  45. Neaderhouser, C.C.: Convergence of block spins defined by a random field. J. Stat. Phys. 22(6), 673–684 (1980)

    Article  MathSciNet  Google Scholar 

  46. Ojo, O., Lillo, R.E., Anta, A.F.: Outlier detection for functional data with r package fdaoutlier (2021). arXiv:2105.05213

    Google Scholar 

  47. Omogoriola, H.O., Williams, A.B., Adegbile, O.M., Olakolu, F.C., Ukaonu, S.U., Myade, E.F.: Length-weight relationships, condition factor (k) and relative condition factor (kn) of sparids, dentex congoensis (maul, 1954) and dentex angolensis (maul and poll, 1953), in nigerian coastal water. Int. J. Biol. Chem. Sci. 5(2), (2011). https://doi.org/10.4314/ijbcs.v5i2.72147

  48. Outeiro, L., Otero, J., Alonso-Fernández, A., Bañón, R., Palacios-Abrantes, J.: Quantifying abundance trends and environmental effects on a population of queen scallop aequipecten opercularis targeted by artisanal fishers in a coastal upwelling area (ría de arousa, NW spain) using a bayesian spatial model. Fish. Res. 240, 105963 (2021)

    Article  Google Scholar 

  49. Planque, B., Buffaz, L.: Quantile regression models for fish recruitment–environment relationships: four case studies. Marine Ecol. Progr. Ser. 357, 213–223 (2008)

    Article  Google Scholar 

  50. Pregler, K.C., Daniel Hanks, R., Childress, E.S., Hitt, N.P., Hocking, D.J., Letcher, B.H., Wagner, T., Kanno, Y.: State-space analysis of power to detect regional brook trout population trends over time. Can. J. Fish. Aquatic Sci. 76(11), 2145–2155 (2019)

    Article  Google Scholar 

  51. Price, D.M., Lim, A., Callaway, A., Eichhorn, M.P., Wheeler, A.J., Iacono, C.L., Huvenne, V.A.I.: Fine-scale heterogeneity of a cold-water coral reef and its influence on the distribution of associated taxa. Front. Marine Sci. 8 (2021). https://doi.org/10.3389/fmars.2021.556313

  52. Rosenblatt, M.: Stationary Sequences and Random Fields. Birkhauser, Boston (1985)

    Book  Google Scholar 

  53. Rufener, M.-C., Kristensen, K., Nielsen, J.R., Bastardie, F.: Bridging the gap between commercial fisheries and survey data to model the spatiotemporal dynamics of marine species. Ecol. Appl. 31(8), e02453 (2021). https://doi.org/10.1002/eap.2453

    Article  Google Scholar 

  54. Sangalli, L.M.: Spatial regression with partial differential equation regularisation. Int. Stat. Rev. 89(3), 505–531 (2021)

    Article  MathSciNet  Google Scholar 

  55. Shang, H.L., Hyndman, R.J., Shang, M.H.L.: Package ‘rainbow’. R packages (2019)

    Google Scholar 

  56. Stockbridge, J., Jones, A.R., Gillanders, B.M.: A meta-analysis of multiple stressors on seagrasses in the context of marine spatial cumulative impacts assessment. Sci. Rep. 10(1), 1–11 (2020)

    Article  Google Scholar 

  57. Takahata, H.: On the rates in the central limit theorem for weakly dependent random fields. Z. Wahrscheinlichkeitstheorie verwandte Gebiete 64(4), 445–456 (1983)

    Article  MathSciNet  Google Scholar 

  58. R Core Team et al.: R: a language and environment for statistical computing. R foundation for statistical computing, Vienna, Austria [methodology reference]. European Environment Agency. https://www.R-project.org/. Accessed Dec 2023

  59. Thorson, J.T., Arimitsu, M.L., Barnett, L.A.K., Cheng, W., Eisner, L.B. Alan, Haynie, C., Hermann, A.J., Holsman, K., Kimmel, D.G., Lomas, M.W., Richar, J., Siddon, E.C.: Forecasting community reassembly using climate-linked spatio-temporal ecosystem models. Ecography 44(4), 612–625 (2021)

    Google Scholar 

  60. Tran, L.T.: Kernel density estimation on random fields. J. Multivariate Anal. 34(1), 37–53 (1990)

    Article  MathSciNet  Google Scholar 

  61. Uberos, S.R., Castaño, A.R.V., Domínguez-Petit, R., Saborido-Rey, F.: Larval fish community in the northwestern iberian upwelling system during the summer period. Oceans 2(4), 700–722 (2021)

    Article  Google Scholar 

  62. Young, M., Carr, M.H.: Application of species distribution models to explain and predict the distribution, abundance and assemblage structure of nearshore temperate reef fishes. Diversity Distrib. 21(12), 1428–1440 (2015)

    Article  Google Scholar 

  63. Zhou, L., Huang, J.Z., Martinez, J.G., Maity, A., Baladandayuthapani, V., Carroll, R.J.: Reduced rank mixed effects models for spatially correlated hierarchical functional data. J. Am. Stat. Assoc. 105(489), 390–400 (2010)

    Article  MathSciNet  Google Scholar 

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Ndiaye, M., Dabo-Niang, S., Ngom, P., Thiam, N., Brehmer, P., El Vally, Y. (2024). Nonparametric Prediction and Supervised Classification for Spatial Dependent Functional Data Under Fixed Sampling Design. In: Seck, D., Kangni, K., Sambou, M.S., Nang, P., Fall, M.M. (eds) Nonlinear Analysis, Geometry and Applications. Trends in Mathematics. Birkhäuser, Cham. https://doi.org/10.1007/978-3-031-52681-7_3

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