Abstract
Fisheries science has been trying to identify the best way to analyze and predict fish biomass and its spatial distribution since several decades using, among others, kirigng model, co-kiriging model, Species Distribution Modeling and Joined Species Distribution Modeling, based on conventional statistical methods as Generalized Linear Models and Generalized Additive Models, with contested results. We consider a bio-ecological issue applying a non parametric spatial prediction based on a spatio-functional regression models, in a fixed design sampling context, as a supervised classification method when the variable of interest belongs to a predefined class set. The proposed predictor takes into account the spatial fish distribution and environmental variable such as salinity and temperature. The development of the method depends on two kernels to control both interactions between observations and locations. The results show that this nonparametric spatial functional supervised classification method is an efficient tool applied to predict spatial distribution of demersal coastal fish off Senegal.
To all my supervisor and fee supports: Sophie DABO-NIANG, Papa NGOM and Patrice Brehmer.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Notes
- 1.
Is a medium-sized species of scallop, an edible marine bivalve mollusk in the family Pectinidae, the scallops. It is found in the northeast Atlantic and is important in fisheries.
References
Ahmed, M.S., N’diaye, M., Attouch, M.K., Dabo-Niange, S.: k-nearest neighbors prediction and classification for spatial data. J. Spatial Econ. 4(1), 12 (2023)
Akia, S., Amandé, M., Pascual, P., Gaertner, D.: Seasonal and inter-annual variability in abundance of the main tropical tunas in the EEZ of côte d’ivoire (2000–2019). Fish. Res. 243, 106053 (2021)
Aura, C.M., Anam, R.O., Musa, S., Kimani, E.N.: The length-weight relationship and condition factor (k constant) of the sparidae (dentex marocannus, valenciennes 1830) of malindi, Kenya. Western Ind. Ocean J. Marine Sci. 12(1), 79–83 (2013)
Baladandayuthapani, V., Mallick, B.K., Hong, M.Y., Lupton, J.R., Turner, n.d., Carroll, R.J.: Bayesian hierarchical spatially correlated functional data analysis with application to colon carcinogenesis. Biometrics 64(1), 64–73 (2007)
Bande, M.F., de la Fuente, M.O., Galeano, P., Nieto, A., Garcia-Portugues, E., de la Fuente, M.M.O.: Package ‘fda. usc’ (2019)
Bosq, D.: Nonparametric Statistics for Stochastic Processes: Estimation and Prediction. Lecture Notes in Statistics, vol. 110, 2nd edn. Springer, New York (1998)
Boudreault, J., St-Hilaire, A., Chebana, F., Bergeron, N.E.: Modelling fish physico-thermal habitat selection using functional regression. J. Ecohydraulics 6(2), 105–120 (2021)
Boumeddane, S., Hamdad, L., Haddadou, H., Dabo-Niang, S.: A kernel discriminant analysis for spatially dependent data. Distrib. Parallel Databases 39(3), 583–606 (2021)
Carbon, M., Tran, L.T., Wu, B.: Kernel density estimation for random fields. Stat. Probab. Lett. 36(2), 115–125 (1997)
Cayre, P., Fontana, A.: [deep sea stocks [shrimps (parapenaeus longirostris, aristeus viridens, plesiopenaeus edwardsianus), sea bream (dentex angolensis), hakes (merluccius polli), squids (loligo sp., sepia officinalis), crabs (geryon quinquedens)]]. Travaux et Documents de l’ORSTOM (France) (1981)
Chen, Y., Liu, S., Shan, X., Wang, H., Li, B., Yang, J., Dai, L., Liu, J., Li, G.: Schistosoma japonicum-infected sentinel mice: surveillance and spatial point pattern analysis in Hubei province, China, 2010–2018. Int. J. Infect. Diseases 99, 179–185 (2020)
Cressie, N.A.C.: Statistics for Spatial Data. Wiley Series in Probability and Statistics, vol. 110, rev. edn. Wiley, Hoboken (1993)
Cuesta-Albertos, J.A., Febrero-Bande, M., de la Fuente, M.O.: The \(dd^{G} \)-classifier in the functional setting. Test 26(1), 119–142 (2017)
Currie, J.C., Thorson, J.T., Sink, K.J., Atkinson, L.J., Fairweather, T.P., Winker, H.: A novel approach to assess distribution trends from fisheries survey data. Fish. Res. 214, 98–109 (2019)
Dabo-Niang, S., Ternynck, C., Yao, A.F.: Nonparametric prediction of spatial multivariate. Nonparametric Stat. 2, 428–458 (2016)
Dabo-Niang, S., Rachdi, M., Yao, A.F.: Kernel regression estimation for spatial functional random variables. Far East J. Theor. Stat. 37(2), 77–113 (2011)
Dabo-Niang, S., Yao, A.F.: Kernel spatial density estimation in infinite dimension space. Metrika 76(1), 19–52 (2013)
Damasio, L.M.A., Peninno, M.G., Lopes, P.F.M.: Small changes, big impacts: geographic expansion in small-scale fisheries. Fish. Res. 226, 105533 (2020)
Devroye, L., Gyorfi, L., Krzyzak, A., Lugosi, G.: On the strong universal consistency of nearest neighbor regression function estimates. Ann. Stat. 22, 1371–1385 (1994)
Devroye, L., Wagner, T.J.: 8 nearest neighbor methods in discrimination. In: Handbook of Statistics (1982)
Dillon, R.A., Conroy, J.D., Rudstam, L.G., Craigmile, P.F., Mason, D.M., Ludsin, S.A.: Towards more robust hydroacoustic estimates of fish abundance in the presence of pelagic macroinvertebrates. Fish. Res. 230, 105667 (2020)
El Machkouri, M.: Nonparametric regression estimation for random fields in a fixed-design. Stat. Inference Stoch. Process. 10(1), 29–47 (2007)
El Machkouri, M., Stoica, R.: Asymptotic normality of kernel estimates in a regression model for random fields. J. Nonparametr. Stat. 22(8), 955–971 (2010)
El Machkouri, M.: Asymptotic normality of the Parzen–Rosenblatt density estimator for strongly mixing random fields. Stat. Infer. Stoch. Process. 14(1), 73–84 (2011)
Febrero, M., Galeano, P., González-Manteiga, W.: A functional analysis of nox levels: location and scale estimation and outlier detection. Comput. Stat. 22, 411–427 (2007)
Febrero, M., Galeano, P., González-Manteiga, W.: Outlier detection in functional data by depth measures, with application to identify abnormal nox levels. Environ. Official J. Int. Environ. Soc. 19(4), 331–345 (2008)
Feng, Y., Yao, L., Zhao, H., Yu, J., Lin, Z.: Environmental effects on the spatiotemporal variability of fish larvae in the western guangdong waters, China. J. Marine Sci. Eng. 9(3), 316 (2021)
Ferraty, F., Vieu, P.: Nonparametric Functional Data Analysis: Theory and Practice. Springer Series in Statistics. Springer, Berlin (2006)
Gonzalez, G.M., Wiff, R., Marshall, C.T., Cornulier, T.: Estimating spatio-temporal distribution of fish and gear selectivity functions from pooled scientific survey and commercial fishing data. Fish. Res. 243, 106054 (2021)
Hallin, M., Lu, Z., Tran, L.T.: Local linear spatial regression. Ann. Stat. 32(6), 2469–2500 (2004)
Hermosilla, C., Rocha, F., Valavanis, V.D.: Assessing octopus vulgaris distribution using presence-only model methods. Hydrobiologia 670(1), 35–47 (2011)
Jiménez-Cordero, A., Maldonado, S.: Automatic feature scaling and selection for support vector machine classification with functional data. Appl. Intell. 51(1), 161–184 (2021)
Kanamori, Y., Nishijima, S., Okamura, H., Yukami, R., Watai, M., Takasuka, A.: Spatio-temporal model reduces species misidentification bias of spawning eggs in stock assessment of spotted mackerel in the western north pacific. Fish. Res. 236, 105825 (2021)
Katsanevakis, S., Verriopoulos, G.: Abundance of octopus vulgaris on soft sediment. Sci. Marina 68(4), 553–560 (2004)
Katsanevakis, S., Verriopoulos, G.: Den ecology of octopus vulgaris cuvier, 1797, on soft sediment: availability and types of shelter. Sci. Marina 68(1), 147–157 (2004)
Klemelä, J.: Density estimation with locally identically distributed data and with locally stationary data. J. Time Ser. Anal. 29(1), 125–141 (2008)
Kuenzer, T., Hrmann, S., Kokoszka, P.: Principal component analysis of spatially indexed functions. J. Am. Stat. Assoc. 116(535), 1444–1456 (2020)
Lefort, R., Fablet, R., Berger, L., Boucher, J.M.: Spatial statistics of objects in 3-d sonar images: application to fisheries acoustics. IEEE Geosci. Remote Sens. Lett. 9(1), 56–59 (2011)
Luan, J., Zhang, C., Xu, B., Xue, Y., Ren, Y.: Modelling the spatial distribution of three portunidae crabs in haizhou bay, China. PloS One 13(11), e0207457 (2018)
Masry, E.: Nonparametric regression estimation for dependent functional data: asymptotic normality. Stoch. Process. Appl. 115(1), 155–177 (2005)
Mesquita, C., Dobby, H., Pierce, G.J., Jones, C.S., Fernandes, P.G.: Abundance and spatial distribution of brown crab (cancer pagurus) from fishery-independent dredge and trawl surveys in the north sea. ICES J. Marine Sci. 78(2), 597–610 (2021)
Mormede, S., Parker, S.J., Pinkerton, M.H.: Comparing spatial distribution modelling of fisheries data with single-area or spatially-explicit integrated population models, a case study of toothfish in the ross sea region. Fish. Res. 221, 105381 (2020)
Ndiaye, M., Dabo-Niang, S., Ngom, P.: Nonparametric prediction for spatial dependent functional data under fixed sampling design. Rev. Colombiana Estad. 45(2), 391–428 (2022)
Ndiaye, M., Dabo-Niang, S., Ngom, P., Thiam, N., Fall, M., Brehmer, P.: Nonparametric prediction for spatial dependent functional data: application to demersal coastal fish off senegal. Math. Model. Random Deterministic Phenom. 31–51 (2020). https://doi.org/10.1002/9781119706922
Neaderhouser, C.C.: Convergence of block spins defined by a random field. J. Stat. Phys. 22(6), 673–684 (1980)
Ojo, O., Lillo, R.E., Anta, A.F.: Outlier detection for functional data with r package fdaoutlier (2021). arXiv:2105.05213
Omogoriola, H.O., Williams, A.B., Adegbile, O.M., Olakolu, F.C., Ukaonu, S.U., Myade, E.F.: Length-weight relationships, condition factor (k) and relative condition factor (kn) of sparids, dentex congoensis (maul, 1954) and dentex angolensis (maul and poll, 1953), in nigerian coastal water. Int. J. Biol. Chem. Sci. 5(2), (2011). https://doi.org/10.4314/ijbcs.v5i2.72147
Outeiro, L., Otero, J., Alonso-Fernández, A., Bañón, R., Palacios-Abrantes, J.: Quantifying abundance trends and environmental effects on a population of queen scallop aequipecten opercularis targeted by artisanal fishers in a coastal upwelling area (ría de arousa, NW spain) using a bayesian spatial model. Fish. Res. 240, 105963 (2021)
Planque, B., Buffaz, L.: Quantile regression models for fish recruitment–environment relationships: four case studies. Marine Ecol. Progr. Ser. 357, 213–223 (2008)
Pregler, K.C., Daniel Hanks, R., Childress, E.S., Hitt, N.P., Hocking, D.J., Letcher, B.H., Wagner, T., Kanno, Y.: State-space analysis of power to detect regional brook trout population trends over time. Can. J. Fish. Aquatic Sci. 76(11), 2145–2155 (2019)
Price, D.M., Lim, A., Callaway, A., Eichhorn, M.P., Wheeler, A.J., Iacono, C.L., Huvenne, V.A.I.: Fine-scale heterogeneity of a cold-water coral reef and its influence on the distribution of associated taxa. Front. Marine Sci. 8 (2021). https://doi.org/10.3389/fmars.2021.556313
Rosenblatt, M.: Stationary Sequences and Random Fields. Birkhauser, Boston (1985)
Rufener, M.-C., Kristensen, K., Nielsen, J.R., Bastardie, F.: Bridging the gap between commercial fisheries and survey data to model the spatiotemporal dynamics of marine species. Ecol. Appl. 31(8), e02453 (2021). https://doi.org/10.1002/eap.2453
Sangalli, L.M.: Spatial regression with partial differential equation regularisation. Int. Stat. Rev. 89(3), 505–531 (2021)
Shang, H.L., Hyndman, R.J., Shang, M.H.L.: Package ‘rainbow’. R packages (2019)
Stockbridge, J., Jones, A.R., Gillanders, B.M.: A meta-analysis of multiple stressors on seagrasses in the context of marine spatial cumulative impacts assessment. Sci. Rep. 10(1), 1–11 (2020)
Takahata, H.: On the rates in the central limit theorem for weakly dependent random fields. Z. Wahrscheinlichkeitstheorie verwandte Gebiete 64(4), 445–456 (1983)
R Core Team et al.: R: a language and environment for statistical computing. R foundation for statistical computing, Vienna, Austria [methodology reference]. European Environment Agency. https://www.R-project.org/. Accessed Dec 2023
Thorson, J.T., Arimitsu, M.L., Barnett, L.A.K., Cheng, W., Eisner, L.B. Alan, Haynie, C., Hermann, A.J., Holsman, K., Kimmel, D.G., Lomas, M.W., Richar, J., Siddon, E.C.: Forecasting community reassembly using climate-linked spatio-temporal ecosystem models. Ecography 44(4), 612–625 (2021)
Tran, L.T.: Kernel density estimation on random fields. J. Multivariate Anal. 34(1), 37–53 (1990)
Uberos, S.R., Castaño, A.R.V., Domínguez-Petit, R., Saborido-Rey, F.: Larval fish community in the northwestern iberian upwelling system during the summer period. Oceans 2(4), 700–722 (2021)
Young, M., Carr, M.H.: Application of species distribution models to explain and predict the distribution, abundance and assemblage structure of nearshore temperate reef fishes. Diversity Distrib. 21(12), 1428–1440 (2015)
Zhou, L., Huang, J.Z., Martinez, J.G., Maity, A., Baladandayuthapani, V., Carroll, R.J.: Reduced rank mixed effects models for spatially correlated hierarchical functional data. J. Am. Stat. Assoc. 105(489), 390–400 (2010)
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2024 The Author(s), under exclusive license to Springer Nature Switzerland AG
About this chapter
Cite this chapter
Ndiaye, M., Dabo-Niang, S., Ngom, P., Thiam, N., Brehmer, P., El Vally, Y. (2024). Nonparametric Prediction and Supervised Classification for Spatial Dependent Functional Data Under Fixed Sampling Design. In: Seck, D., Kangni, K., Sambou, M.S., Nang, P., Fall, M.M. (eds) Nonlinear Analysis, Geometry and Applications. Trends in Mathematics. Birkhäuser, Cham. https://doi.org/10.1007/978-3-031-52681-7_3
Download citation
DOI: https://doi.org/10.1007/978-3-031-52681-7_3
Published:
Publisher Name: Birkhäuser, Cham
Print ISBN: 978-3-031-52680-0
Online ISBN: 978-3-031-52681-7
eBook Packages: Mathematics and StatisticsMathematics and Statistics (R0)