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Feature-Based Transformer with Incomplete Multimodal Brain Images for Diagnosis of Neurodegenerative Diseases

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Predictive Intelligence in Medicine (PRIME 2023)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 14277))

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Abstract

Benefiting from complementary information, multimodal brain imaging analysis has distinct advantages over single-modal methods for the diagnosis of neurodegenerative diseases such as Alzheimer’s disease. However, multi-modal brain images are often incomplete with missing data in clinical practice due to various issues such as motion, medical costs, and scanner availability. Most existing methods attempted to build machine learning models to directly estimate the missing images. However, since brain images are of high dimension, accurate and efficient estimation of missing data is quite challenging, and not all voxels in the brain images are associated with the disease. In this paper, we propose a multimodal feature-based transformer to impute multimodal brain features with missing data for the diagnosis of neurodegenerative disease. The proposed method consists of a feature regression subnetwork and a multimodal fusion subnetwork based on transformer, for completion of the features of missing data and also multimodal diagnosis of disease. Different from previous methods for the generation of missing images, our method imputes high-level and disease-related features for multimodal classification. Experiments on the ADNI database with 1,364 subjects show better performance of our method over the state-of-the-art methods in disease diagnosis with missing multimodal data.

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Acknowledgements

This study was supported in part by the National Natural Science Foundation of China (No.62171283), Natural Science Foundation of Shanghai (20ZR1426300), in part by the National Key R &D Program of China (National key research and development program of China) under Grant (2022YFC2503302/2022YFC2503305), by Shanghai Jiao Tong University Scientific and Technological Innovation Funds (No.2019QYB02), CAAI-Huawei MindSpore Open Fund, Shanghai Municipal Science and Technology Major Project (2021SHZDZX0102), the Fundamental Research Funds for the Central Universities, Supported by Shanghai Municipal Science and Technology Major Project (No.2018SHZDZX01), Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence (LCNBI) and ZJLab.

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Correspondence to Feng Shi , Dinggang Shen or Manhua Liu .

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Gao, X., Shi, F., Shen, D., Liu, M. (2023). Feature-Based Transformer with Incomplete Multimodal Brain Images for Diagnosis of Neurodegenerative Diseases. In: Rekik, I., Adeli, E., Park, S.H., Cintas, C., Zamzmi, G. (eds) Predictive Intelligence in Medicine. PRIME 2023. Lecture Notes in Computer Science, vol 14277. Springer, Cham. https://doi.org/10.1007/978-3-031-46005-0_3

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  • DOI: https://doi.org/10.1007/978-3-031-46005-0_3

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-031-46004-3

  • Online ISBN: 978-3-031-46005-0

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