Skip to main content

Microbiomes in the Intestine of Developing Pigs: Implications for Nutrition and Health

  • Chapter
  • First Online:
Recent Advances in Animal Nutrition and Metabolism

Part of the book series: Advances in Experimental Medicine and Biology ((AEMB,volume 1354))

Abstract

The past decade has seen an expansion of studies on the role of gut microbiome in piglet nutrition and health. With the help of culture-independent sequencing techniques, the colonization of gut microbiota and their implication in physiology are being investigated in depth. Immediately after birth, the microbes begin to colonize following an age-dependent trajectory, which can be modified by maternal environment, diet, antibiotics, and fecal microbiota transplantation. The early-life gut microbiome is relatively simple but enriched with huge metabolic potential to utilize milk oligosaccharides and affect the epithelial function. After weaning, the gut microbiome develops towards a gradual adaptation to the introduction of solid food, with an enhanced ability to metabolize amino acids, fibers, and bile acids. Here we summarize the compositional and functional difference of the gut microbiome in the keystone developing phases, with a specific focus on the use of different nutritional approaches based on the phase-specific gut microbiome.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 109.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 139.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  • Abedon ST (2009) Phage evolution and ecology. Adv Appl Microbiol 67:1–45

    Article  CAS  PubMed  Google Scholar 

  • Allen HK, Looft T, Bayles DO, Humphrey S, Levine UY, Alt D, Stanton TB (2011) Antibiotics in feed induce prophages in swine fecal microbiomes. mBio 2:e00260–11

    Google Scholar 

  • Bian G, Ma S, Zhu Z et al (2016) Age, introduction of solid feed and weaning are more important determinants of gut bacterial succession in piglets than breed and nursing mother as revealed by a reciprocal cross-fostering model. Environ Microbiol 18:1566–1577

    Article  CAS  PubMed  Google Scholar 

  • Boudry G, Lallès JP, Malbert CH, Bobillier E, Sève B (2002) Diet-related adaptation of the small intestine at weaning in pigs is functional rather than structural. J Pediatr Gastroenterol Nutr 34:180–187

    Article  CAS  PubMed  Google Scholar 

  • Brunse A, Martin L, Rasmussen TS et al (2019) Effect of fecal microbiota transplantation route of administration on gut colonization and host response in preterm pigs. ISME J 13:720–733

    Article  CAS  PubMed  Google Scholar 

  • Cao YL, Rocha ER, Smith CJ (2014) Efficient utilization of complex N-linked glycans is a selective advantage for Bacteroides fragilis in extraintestinal infections. Proc Natl Acad Sci USA 111:12901–12906

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Cheng CS, Wei HK, Wang P, Yu HC, Zhang XM, Jiang SW, Peng J (2019) Early intervention with faecal microbiota transplantation: an effective means to improve growth performance and the intestinal development of suckling piglets. Animal 13:533–541

    Article  CAS  PubMed  Google Scholar 

  • Cummings JH, Stephen AM (2007) Carbohydrate terminology and classification. Eur J Clin Nutr 61:S5–S18

    Article  CAS  PubMed  Google Scholar 

  • Cuskin F, Lowe EC, Temple MJ et al (2015) Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism. Nature 517:165-U186

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Dai Z, Wu G, Zhu W (2011) Amino acid metabolism in intestinal bacteria: links between gut ecology and host health. Front Biosci 16:1768–1786

    Article  CAS  Google Scholar 

  • Dai Z, Zhang J, Wu G, Zhu W (2010) Utilization of amino acids by bacteria from the pig small intestine. Amino Acids 39:1201–1215

    Article  CAS  PubMed  Google Scholar 

  • Dai Z, Li XL, Xi PB, Zhang J, Wu G, Zhu W (2012) Metabolism of select amino acids in bacteria from the pig small intestine. Amino Acids 42:1597–1608

    Article  CAS  PubMed  Google Scholar 

  • Davis LMG, Martinez I, Walter J, Goin C, Hutkins RW (2011) Barcoded pyrosequencing reveals that consumption of galactooligosaccharides results in a highly specific bifidogenic response in humans. PloS one 6:e25200

    Google Scholar 

  • Eggink HM, van Nierop ES, Schooneman MG et al (2018) Transhepatic bile acid kinetics in pigs and humans. Clin Nutr 37:1406–1414

    Article  CAS  PubMed  Google Scholar 

  • Fouhse JM, Yang K, More-Bayona J, Gao Y, Goruk S, Plastow G, Field CJ, Barreda DR, Willing BP (2019) Neonatal exposure to amoxicillin alters long-term immune response despite transient effects on gut-microbiota in piglets. Front Immunol 10:2059

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Gao J, Yin J, Xu K, Han H, Liu Z, Wang C, Li T, Yin Y (2020a) Protein level and infantile diarrhea in a postweaning piglet model. Mediators Inflamm 2020:1937387

    Article  PubMed Central  PubMed  Google Scholar 

  • Gao K, Mu C, Farzi A, Zhu W (2020b) Tryptophan metabolism: a link between the gut microbiota and brain. Adv Nutr 11:709–723

    Article  PubMed  Google Scholar 

  • Gao K, Pi Y, Mu C, Peng Y, Huang Z, Zhu W (2018) Antibiotics-induced modulation of large intestinal microbiota altered aromatic amino acid profile and expression of neurotransmitters in the hypothalamus of piglets. J Neurochem 146:219–234

    Article  CAS  PubMed  Google Scholar 

  • Gao K, Pi Y, Mu C, Farzi A, Liu Z, Zhu W (2019) Increasing carbohydrate availability in the hindgut promotes hypothalamic neurotransmitter synthesis: aromatic amino acids linking the microbiota-brain axis. J Neurochem 149:641–659

    Article  CAS  PubMed  Google Scholar 

  • Geng S, Cheng S, Li Y, Wen Z, Ma X, Jiang X, Wang Y, Han X (2018) Faecal microbiota transplantation reduces susceptibility to epithelial injury and modulates tryptophan metabolism of the microbial community in a piglet model. J Crohns Colitis 12:1359–1374

    PubMed  Google Scholar 

  • Gerard P (2013) Metabolism of cholesterol and bile acids by the gut microbiota. Pathogens 3:14–24

    Article  PubMed Central  PubMed  CAS  Google Scholar 

  • Guevarra RB, Lee JH, Lee SH, Seok MJ, Kim DW, Kang BN, Johnson TJ, Isaacson RE, Kim HB (2019) Piglet gut microbial shifts early in life: causes and effects. J Anim Sci Biotechnol 10:1

    Article  PubMed Central  PubMed  Google Scholar 

  • Hamilton JP, Xie GF, Raufman JP, Hogan S, Griffin TL, Packard CA, Chatfield DA, Hagey LR, Steinbach JH, Hofmann AF (2007) Human cecal bile acids: concentration and spectrum. Am J Physiol 293:G256–G263

    CAS  Google Scholar 

  • He X, Sun W, Ge T, Mu C, Zhu W (2017) An increase in corn resistant starch decreases protein fermentation and modulates gut microbiota during in vitro cultivation of pig large intestinal inocula. Anim Nutr 3:219–224

    Article  PubMed Central  PubMed  Google Scholar 

  • Hou YQ, He WL, Hu SD, Wu G (2019) Composition of polyamines and amino acids in plant-source foods for human consumption. Amino Acids 51:1153–1165

    Article  CAS  PubMed  Google Scholar 

  • Hou YQ, Hu SD, Li XY, He WL, Wu G (2020) Amino acid metabolism in the liver: nutritional and physiological significance. Adv Exp Med Biol 1265:21–37

    Article  CAS  PubMed  Google Scholar 

  • Hu P, Zhao F, Wang J, Zhu W (2020) Early-life lactoferrin intervention modulates the colonic microbiota, colonic microbial metabolites and intestinal function in suckling piglets. Appl Microbiol Biotechnol 104:6185–6197

    Article  CAS  PubMed  Google Scholar 

  • Ivarsson E, Liu HY, Dicksved J, Roos S, Lindberg JE (2012) Impact of chicory inclusion in a cereal-based diet on digestibility, organ size and faecal microbiota in growing pigs. Animal 6:1077–1085

    Article  CAS  PubMed  Google Scholar 

  • Jha R, Leterme P (2012) Feed ingredients differing in fermentable fibre and indigestible protein content affect fermentation metabolites and faecal nitrogen excretion in growing pigs. Animal 6:603–611

    Article  CAS  PubMed  Google Scholar 

  • Jha R, Berrocoso JD (2015) Dietary fiber utilization and its effects on physiological functions and gut health of swine. Animal 9:1441–1452

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Jha R, Rossnagel B, Pieper R, Van Kessel A, Leterme P (2010) Barley and oat cultivars with diverse carbohydrate composition alter ileal and total tract nutrient digestibility and fermentation metabolites in weaned piglets. Animal 4:724–731

    Article  CAS  PubMed  Google Scholar 

  • Jones BV, Begley M, Hill C, Gahan CGM, Marchesi JR (2008) Functional and comparative metagenomic analysis of bile salt hydrolase activity in the human gut microbiome. Proc Natl Acad Sci USA 105:13580–13585

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Karlsson OE, Larsson J, Hayer J, Berg M, Jacobson M (2016) The intestinal eukaryotic virome in healthy and diarrhoeic neonatal piglets. PloS One 11:e0151481

    Google Scholar 

  • Kim HB, Borewicz K, White BA, Singer RS, Sreevatsan S, Tu ZJ, Isaacson RE (2011) Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs. Vet Microbiol 153:124–133

    Article  PubMed  Google Scholar 

  • Koh A, De Vadder F, Kovatcheva-Datchary P, Backhed F (2016) From dietary fiber to host physiology: short-chain fatty acids as key bacterial metabolites. Cell 165:1332–1345

    Article  CAS  PubMed  Google Scholar 

  • Labrie SJ, Samson JE, Moineau S (2010) Bacteriophage resistance mechanisms. Nat Rev Microbiol 8:317–327

    Article  CAS  PubMed  Google Scholar 

  • Lepercq P, Relano P, Cayuela C, Juste C (2004) Bifidobacterium animalis strain DN-173 010 hydrolyses bile salts in the gastrointestinal tract of pigs. Scand J Gastroenterol 39:1266–1271

    Article  CAS  PubMed  Google Scholar 

  • Li P, Wu G (2020) Composition of amino acids and related nitrogenous nutrients in feedstuffs for animal diets. Amino Acids 52:523–542

    Article  CAS  PubMed  Google Scholar 

  • Li P, He WL, Wu G (2021) Composition of amino acids in foodstuffs for humans and animals. Adv Exp Med Biol 1332:189–209

    Article  PubMed  Google Scholar 

  • Liu JB, Cao SC, Liu J, Xie YN, Zhang HF (2018) Effect of probiotics and xylo-oligosaccharide supplementation on nutrient digestibility, intestinal health and noxious gas emission in weanling pigs. Asian-Australas J Anim Sci 31:1660–1669

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Looft T, Allen HK, Cantarel BL, Levine UY, Bayles DO, Alt DP, Henrissat B, Stanton TB (2014) Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations. ISME J 8:1566–1576

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Luo Z, Li C, Cheng Y, Hang S, Zhu W (2015) Effects of low dietary protein on the metabolites and microbial communities in the caecal digesta of piglets. Arch Anim Nutr 69:212–226

    Article  CAS  PubMed  Google Scholar 

  • Ma M, He X, Zhu W (2016) Metabolic pattern of pig hindgut bacteria on aromatic amino acids by an in vitro fermentation method. Acta Microbiol Sin 56:1786–1793

    CAS  Google Scholar 

  • Mach N, Berri M, Estelle J et al (2015) Early-life establishment of the swine gut microbiome and impact on host phenotypes. Environ Microbiol Rep 7:554–569

    Article  CAS  PubMed  Google Scholar 

  • Marcobal A, Barboza M, Sonnenburg ED et al (2011) Bacteroides in the infant gut consume milk oligosaccharides via mucus-utilization pathways. Cell Host Microbe 10:507–514

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Martinez RC, Cardarelli HR, Borst W et al (2013) Effect of galactooligosaccharides and Bifidobacterium animalis Bb-12 on growth of Lactobacillus amylovorus DSM 16698, microbial community structure, and metabolite production in an in vitro colonic model set up with human or pig microbiota. FEMS Microbiol Ecol 84:110–123

    Article  CAS  PubMed  Google Scholar 

  • Moro G, Minoli I, Mosca M, Fanaro S, Jelinek J, Stahl B, Boehm G (2002) Dosage-related bifidogenic effects of galacto- and fructooligosaccharides in formula-fed term infants. J Pediatr Gastroenterol Nutr 34:291–295

    Article  CAS  PubMed  Google Scholar 

  • Mu C, Zhu W (2019) Antibiotic effects on gut microbiota, metabolism, and beyond. Appl Microbiol Biotechnol 103:9277–9285

    Article  CAS  PubMed  Google Scholar 

  • Mu C, Yang Y, Zhu W (2015) Crosstalk between the immune receptors and gut microbiota. Curr Protein Pept Sc 16:622–631

    Article  CAS  Google Scholar 

  • Mu C, Yang Y, Zhu W (2016a) Gut microbiota: the brain peacekeeper. Front Microbiol 7:345

    Article  PubMed Central  PubMed  Google Scholar 

  • Mu C, Yang Y, Luo Z, Guan L, Zhu W (2016b) The colonic microbiome and epithelial transcriptome are altered in rats fed a high-protein diet compared with a normal-protein diet. J Nutr 146:474–483

    Article  CAS  PubMed  Google Scholar 

  • Mu C, Bian G, Su Y, Zhu W (2019a) Differential effects of breed and nursing on early-life colonic microbiota and immune status as revealed in a cross-fostering piglet model. Appl Environ Microbiol 85:e02510-e2518

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Mu C, Cai Z, Bian G, Du Y, Ma S, Su Y, Liu L, Voglmeir J, Huang R, Zhu W (2019b) New insights into porcine milk N-glycome and the potential relation with offspring gut microbiome. J Proteome Res 18:1114–1124

    Article  CAS  PubMed  Google Scholar 

  • Mu C, Yang Y, Su Y, Zoetendal EG, Zhu W (2017a) Differences in microbiota membership along the gastrointestinal tract of piglets and their differential alterations following an early-life antibiotic intervention. Front Microbiol 8:797

    Article  PubMed Central  PubMed  Google Scholar 

  • Mu C, Zhang L, He X, Smidt H, Zhu W (2017b) Dietary fibres modulate the composition and activity of butyrate-producing bacteria in the large intestine of suckling piglets. Antonie Van Leeuwenhoek 110:687–696

    Article  CAS  PubMed  Google Scholar 

  • Mu C, Yang Y, Yu K, Yu M, Zhang C, Su Y, Zhu W (2017c) Alteration of metabolomic markers of amino-acid metabolism in piglets with in-feed antibiotics. Amino Acids 49:771–781

    Article  CAS  PubMed  Google Scholar 

  • Mu C, Yang Y, Luo Z, Zhu W (2017d) Temporal microbiota changes of high-protein diet intake in a rat model. Anaerobe 47:218–225

    Article  CAS  PubMed  Google Scholar 

  • Niu Q, Li PH, Hao SS et al (2015) Dynamic distribution of the gut microbiota and the relationship with apparent crude fiber digestibility and growth stages in pigs. Sci Rep 5:9938

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Pan J, Yin J, Zhang K, Xie PF, Ding H, Huang XG, Blachier F, Kong XF (2019) Dietary xylo-oligosaccharide supplementation alters gut microbial composition and activity in pigs according to age and dose. AMB Express 9:134

    Article  PubMed Central  PubMed  CAS  Google Scholar 

  • Peng Y, Yu K, Mu C, Hang S, Che L, Zhu W (2017) Progressive response of large intestinal bacterial community and fermentation to the stepwise decrease of dietary crude protein level in growing pigs. Appl Microbiol Biotechnol 101:5415–5426

    Article  CAS  PubMed  Google Scholar 

  • Petri D, Hill J, Van Kessel A (2010) Microbial succession in the gastrointestinal tract (GIT) of the preweaned pig. Livest Sci 133:107–109

    Article  Google Scholar 

  • Pi Y, Gao K, Peng Y, Mu C, Zhu W (2019) Antibiotic-induced alterations of the gut microbiota and microbial fermentation in protein parallel the changes in host nitrogen metabolism of growing pigs. Animal 13:262–272

    Article  CAS  PubMed  Google Scholar 

  • Pi Y, Mu C, Gao K, Liu Z, Peng Y, Zhu W (2020) Increasing the hindgut carbohydrate/protein ratio by cecal infusion of corn starch or casein hydrolysate drives gut microbiota-related bile acid metabolism to stimulate colonic barrier function. mSystems 5:e00176–20

    Google Scholar 

  • Poroyko V, White JR, Wang M, Donovan S, Alverdy J, Liu DC, Morowitz MJ (2010) Gut microbial gene expression in mother-fed and formula-fed piglets. PloS One 5:e12459

    Google Scholar 

  • Ran S, Mu C, Zhu W (2019) Diversity and community pattern of sulfate-reducing bacteria in piglet gut. J Anim Sci Biotechnol 10:40

    Article  PubMed Central  PubMed  Google Scholar 

  • Rastall RA, Gibson GR (2015) Recent developments in prebiotics to selectively impact beneficial microbes and promote intestinal health. Curr Opin Biotech 32:42–46

    Article  CAS  PubMed  Google Scholar 

  • Reese AT, Pereira FC, Schintlmeister A et al (2018) Microbial nitrogen limitation in the mammalian large intestine. Nat Microbiol 3:1441–1450

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Ridlon JM, Kang DJ, Hylemon PB (2006) Bile salt biotransformations by human intestinal bacteria. J Lipid Res 47:241–259

    Article  CAS  PubMed  Google Scholar 

  • Rodriguez E, Arques JL, Rodriguez R, Nunez M, Medina M (2003) Reuterin production by lactobacilli isolated from pig faeces and evaluation of probiotic traits. Lett Appl Microbiol 37:259–263

    Article  CAS  PubMed  Google Scholar 

  • Rossi M, Corradini C, Amaretti A, Nicolini M, Pompei A, Zanoni S, Matteuzzi D (2005) Fermentation of fructooligosaccharides and inulin by bifidobacteria: a comparative study of pure and fecal cultures. Appl Environ Microbiol 71:6150–6158

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Schokker D, Fledderus J, Jansen R, Vastenhouw SA, de Bree FM, Smits MA, Jansman A (2018) Supplementation of fructooligosaccharides to suckling piglets affects intestinal microbiota colonization and immune development. J Anim Sci 96:2139–2153

    Article  PubMed Central  PubMed  Google Scholar 

  • Shan T, Li L, Simmonds P, Wang C, Moeser A, Delwart E (2011) The fecal virome of pigs on a high-density farm. J Virol 85:11697–11708

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Su Y, Yao W, Perez-Gutierrez ON, Smidt H, Zhu W (2008) Changes in abundance of Lactobacillus spp. and Streptococcus suis in the stomach, jejunum and ileum of piglets after weaning. FEMS Microbiol Ecol 66:546–555

    Article  CAS  PubMed  Google Scholar 

  • Su Y, Bian G, Zhu Z, Smidt H, Zhu W (2014) Early methanogenic colonisation in the faeces of Meishan and Yorkshire piglets as determined by pyrosequencing analysis. Archaea 2014:547908

    Google Scholar 

  • Sun Y, Su Y, Zhu W (2016) Microbiome-metabolome responses in the cecum and colon of pig to a high resistant starch diet. Front Microbiol 7:779

    Article  PubMed Central  PubMed  Google Scholar 

  • Tian S, Wang J, Yu H, Wang J, Zhu W (2019) Changes in ileal microbial composition and microbial metabolism by an early-life galacto-oligosaccharides intervention in a neonatal porcine model. Nutrients 11:1153

    Article  CAS  Google Scholar 

  • Van Hees HMJ, Davids M, Maes D, Millet S, Possemiers S, den Hartog LA, van Kempen T, Janssens GPJ (2019) Dietary fibre enrichment of supplemental feed modulates the development of the intestinal tract in suckling piglets. J Anim Sci Biotechnol 10:83

    Article  PubMed Central  PubMed  CAS  Google Scholar 

  • Wang J, Tian S, Yu H, Wang J, Zhu W (2019a) Response of colonic mucosa-associated microbiota composition, mucosal immune homeostasis, and barrier function to early life galactooligosaccharides intervention in suckling piglets. J Agric Food Chem 67:578–588

    Article  CAS  PubMed  Google Scholar 

  • Wang P, Zhong HJ, Song YM et al (2019b) Targeted metabolomics analysis of maternal-placental-fetal metabolism in pregnant swine reveals links in fetal bile acid homeostasis and sulfation capacity. Am J Physiol 317:G8–G16

    CAS  Google Scholar 

  • Wang X, Tsai T, Deng F et al (2019c) Longitudinal investigation of the swine gut microbiome from birth to market reveals stage and growth performance associated bacteria. Microbiome 7:109

    Article  PubMed Central  PubMed  Google Scholar 

  • Wang Y, Zhou J, Wang G, Cai S, Zeng X, Qiao S (2018) Advances in low-protein diets for swine. J Anim Sci Biotechnol 9:60

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Williams BA, Verstegen MWA, Tamminga S (2001) Fermentation in the large intestine of single-stomached animals and its relationship to animal health. Nutr Res Rev 14:207–227

    Article  CAS  PubMed  Google Scholar 

  • Wu G (2009) Amino acids: metabolism, functions, and nutrition. Amino Acids 37:1–17

    Article  PubMed  CAS  Google Scholar 

  • Wu G (2018) Principles of animal nutrition. CRC Press, Boca Raton, Florida

    Google Scholar 

  • Wu G (2020) Important roles of dietary taurine, creatine, carnosine, anserine and hydroxyproline in human nutrition and health. Amino Acids 52:329–360

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Wu G (2022) Nutrition and metabolism: Foundations for animal growth, development, reproduction, and health. Adv Exp Med Biol 1354:1–24

    Google Scholar 

  • Wu G, Bazer FW, Dai Z, Li D, Wang J, Wu Z (2014) Amino acid nutrition in animals: protein synthesis and beyond. Annu Rev Anim Biosci 2:387–417

    Article  CAS  PubMed  Google Scholar 

  • Xiao Y, Yan H, Diao H, Yu B, He J, Yu J, Zheng P, Mao X, Luo Y, Chen D (2017) Early gut microbiota intervention suppresses DSS-induced inflammatory responses by deactivating TLR/NLR signalling in pigs. Sci Rep 7:3224

    Article  PubMed Central  PubMed  CAS  Google Scholar 

  • Xu RY, Lu Y, Wang J, Liu JJ, Su Y, Zhu W (2019) Effects of the different dietary fibers on luminal microbiota composition and mucosal gene expression in pig colons. J Funct Foods 59:71–79

    Article  CAS  Google Scholar 

  • Xu ZR, Zou XT, Hu CH, Xia MS, Zhan XA, Wang MQ (2002) Effects of dietary fructooligosaccharide on digestive enzyme activities, intestinal microflora and morphology of growing pigs. Asian-Australas J Anim Sci 15:1784–1789

    Article  CAS  Google Scholar 

  • Yang Y, Dai Z, Zhu W (2014) Important impacts of intestinal bacteria on utilization of dietary amino acids in pigs. Amino Acids 46:2489–2501

    Article  CAS  PubMed  Google Scholar 

  • Yang Y, Mu C, Luo Z, Zhu W (2016) Bromochloromethane, a methane analogue, affects the microbiota and metabolic profiles of the rat gastrointestinal tract. Appl Environ Microbiol 82:778–787

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Yin J, Li FN, Kong XF et al (2019) Dietary xylo-oligosaccharide improves intestinal functions in weaned piglets. Food Funct 10:2701–2709

    Article  CAS  PubMed  Google Scholar 

  • Yu M, Mu C, Zhang C, Yang Y, Su Y, Zhu W (2018) Marked response in microbial community and metabolism in the ileum and cecum of suckling piglets after early antibiotics exposure. Front Microbiol 9:1166

    Article  PubMed Central  PubMed  Google Scholar 

  • Yu M, Mu C, Zhang C, Yang Y, Su Y, Zhu W (2020) Long-term effect of early antibiotic exposure on amino acid profiles and gene expression of transporters and receptors in the small intestinal mucosa of growing pigs with different dietary protein levels. J Sci Food Agric 100:235–244

    Article  CAS  PubMed  Google Scholar 

  • Yu M, Zhang C, Yang Y, Mu C, Su Y, Yu K, Zhu W (2017a) Long-term effects of early antibiotic intervention on blood parameters, apparent nutrient digestibility, and fecal microbial fermentation profile in pigs with different dietary protein levels. J Anim Sci Biotechnol 8:60

    Article  PubMed Central  PubMed  CAS  Google Scholar 

  • Yu M, Mu C, Yang Y, Zhang C, Su Y, Huang Z, Yu K, Zhu W (2017b) Increases in circulating amino acids with in-feed antibiotics correlated with gene expression of intestinal amino acid transporters in piglets. Amino Acids 49:1587–1599

    Article  CAS  PubMed  Google Scholar 

  • Zhang C, Yu M, Yang Y, Mu C, Su Y, Zhu W (2016a) Effect of early antibiotic administration on cecal bacterial communities and their metabolic profiles in pigs fed diets with different protein levels. Anaerobe 42:188–196

    Article  CAS  PubMed  Google Scholar 

  • Zhang L, Mu C, He X, Su Y, Mao S, Zhang J, Smidt H, Zhu W (2016b) Effects of dietary fibre source on microbiota composition in the large intestine of suckling piglets. FEMS Microbiol Lett 363: fnw138.

    Google Scholar 

  • Zhang C, Yu M, Yang Y, Mu C, Su Y, Zhu W (2017) Differential effect of early antibiotic intervention on bacterial fermentation patterns and mucosal gene expression in the colon of pigs under diets with different protein levels. Appl Microbiol Biotechnol 101:2493–2505

    Article  CAS  PubMed  Google Scholar 

  • Zhang C, Yu M, Yang Y, Mu C, Su Y, Zhu W (2020) Effect of early antibiotic intervention on specific bacterial communities and immune parameters in the small intestine of growing pigs fed different protein level diets. Animal 1–12

    Google Scholar 

  • Zmora N, Suez J, Elinav E (2019) You are what you eat: diet, health and the gut microbiota. Nat Rev Gastroenterol Hepatol 16:35–56

    Article  CAS  PubMed  Google Scholar 

  • Zwicker BL, Agellon LB (2013) Transport and biological activities of bile acids. Int J Biochem Cell B 45:1389–1398

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was funded by the Natural Science Foundation of China (32030104, 31902166, 31430082) and National Key Basic Research Program of China (2013CB127300).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Weiyun Zhu .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2022 Springer Nature Switzerland AG

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Mu, C., Pi, Y., Zhang, C., Zhu, W. (2022). Microbiomes in the Intestine of Developing Pigs: Implications for Nutrition and Health. In: Wu, G. (eds) Recent Advances in Animal Nutrition and Metabolism. Advances in Experimental Medicine and Biology, vol 1354. Springer, Cham. https://doi.org/10.1007/978-3-030-85686-1_9

Download citation

Publish with us

Policies and ethics