Abstract
Potato is the third most important food crop after wheat and rice, and India is the second largest producer of potatoes after China. Globally all breeding efforts in potato were directed at tetraploid levels and are primarily based on biparental crossing followed by selection. The major constrains in potato breeding are autopolyploid inheritance and heterozygous nature of the crop. Earlier attempts to develop homozygous parental lines at the diploid level failed due to high inbreeding depression and self-incompatibility. The homozygosity in diploids by inbreeding is expected to be much faster than tetraploids, but the only issue was self-incompatibility. The occurrence of natural self-incompatibility inhibitors, i.e., sli gene in different wild/semi-cultivated species, has paved the way for developing diploid homozygous parental lines for further exploitation of hybrid vigour. Now many firms including Solynta are in advanced stage of trialing and release of diploid inbred lines with yields equivalent to tetraploid potato varieties. These results have set an agenda to all potato R&D institutions to bred and release diploid potato varieties with favourable alleles of genomic and economic interests. Besides, marker-assisted breeding, genomic selection and genome editing are other important tools reshaping the conventional breeding in potatoes.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Similar content being viewed by others
References
Allard RW (1999) History of plant population genetics. Annu Rev Genet 33:1–27
Andersson M et al (2017) Efficient targeted multiallelic mutagenesis in tetraploid potato (Solanum tuberosum) by transient CRISP-Cas9 expression in protoplasts. Plant Cell Rep 36:117–128
Andersson M, Turesson H, Olsson N, Fält AS, Ohlsson P, Gonzalez MN, Samuelsson M, Hofvander P (2018) Genome editing in potato via CRISPR-Cas9 ribonucleoprotein delivery. Physiol Plant 164:378–384
Arora L, Narula A (2017) Gene editing and crop improvement using CRISPR-Cas9 system. Front Plant Sci 8:1932. https://doi.org/10.3389/fpls.2017.01932
Barker H (1996) Inheritance of resistance to potato viruses Y and a in progeny obtained from potato cultivars containing gene Ry: evidence for a new gene for extreme resistance to PVA. Theor Appl Genet 93:710–716
Bradshaw JE (2009) Potato breeding at the Scottish plant Breeding Station and the Scottish crop research institute: 1920–2008. Potato Res 52:141–172
Bradshaw JE, MacKay GR (1994) Breeding strategies for clonally propagated crops. In: Bradshaw JE, MacKay GR (eds) Potato Genetics. CAB International, Wallingford, pp 467–497
Butler NM, Atkins PA, Voytas DF, Douches DS (2015) Generation and inheritance of targeted mutations in potato (Solanum tuberosum L.) using the CRISPR/Cas system. PLOS One 10:e0144591
Butler NM, Jiang J, Stupar RM (2018) Crop improvement using genome editing. Plant Breeding Review 41:55–101
Carroll CP (1982) A mass-selection method for the acclimatization and improvement of edible diploid potatoes in the United Kingdom. J Agric Sci 99:631–640
Chakrabarti SK, Singh BP, Thakur G, Tiwari JK, Kaushik SK, Sharma S, Bhardwaj V (2014) QTL mapping underlying resistance to late blight in a diploid potato family of Solanum spegazzinii × S. chacoense. Potato Res 57:1–11
Chase SS (1963a) Analytic breeding in Solanum tuberosum L. -a scheme utilizing parthenotes and other diploid stocks. Can J Genet Cytol 5:389–395
Chase SS (1963b) Analytic breeding of amphipolyploid plant varieties. Crop Sci 4:334–337
Cockerham G (1970) Genetical studies on resistance to potato viruses X and Y. Heredity 25:309–348
Dalamu BV, Umamaheshwari R, Sharma R, Kaushik SK, Joseph TA, Singh BP, Gebhardt C (2012) Potato cyst nematode (PCN) resistance: genes, genotypes and markers-an update. SABRAO J Breed Genet 44(2):202–228
De Maine MJ (1996) An assessment of true potato seed families of Solanum phureja. Potato Res 39:323–332
Endelman JB, Jansky SH (2016) Genetic mapping with an inbred line-derived F2 population in potato. Theor Appl Genet 129:935–943
Endelman JB, Carley CAS, Bethke PC, Coombs JJ, Clough ME et al (2018) Genetic variance partitioning and genome-wide prediction with allele dosage information in autotetraploid potato. Genetics 209:77–87
Gopal J (2015) Challenges and way-forward in selection of superior parents, crosses and clones in potato breeding. Potato Res 58:165–188
Habyarimana E, Parisi B, Mandolino G (2017) Genomic prediction for yields, processing and nutritional quality traits in cultivated potato (Solanum tuberosum L.). Plant Breed 136:245–252. https://doi.org/10.1111/pbr.12461
Hamalainen JH, Sorii VA, Watanabe KN, Gebhardt C, Valkonen JPT (1998) Molecular examination of a chromosome region that controls resistance to potato Y and a potyviruses in potato. Theor Appl Genet 96:1036–1043
Heffner EL, Sorrells ME, Jannink JL (2009) Genomic selection for crop improvement. Crop Sci 49:1–12. https://doi.org/10.2135/cropsci2008.08.0512
Hutten R (1994) Basic aspects of potato breeding via the diploid level. PhD Thesis, Wageningen, p 93
Jansky SH, Spooner DM (2018) The evolution of potato breeding. Plant Breed Rev 41:169–214
Jansky S, Bethke P, Spooner DM (2014a) Yield gains in potato: contributing factors and future prospects. In: Smith S, Diers B, Carver B, Specht J (eds) Yield gains in major U.S. field crops. Crop Science Society of America, Madison, pp 195–217
Jansky S, Chung Y, Kittipadukal P (2014b) M6: a diploid potato inbred line for use in breeding and genetics research. J Plant Reg 8:195–199
Jansky SH, Dawson J, Spooner DM (2015) How do we address the disconnect between genetic and morphological diversity in germplasm collections? Am J Bot 102:1213–1215
Kaushik SK, Sharma R, Garg ID, Singh BP, Chakrabarti SK, Bhardwaj V, Pandey SK (2013) Development of a triplex (YYYy) parental potato line with extreme resistance to potato virus Y using marker assisted selection. J Hortic Sci Biotechnol 88:580–584
Kim HJ, Lee HR, Jo KR, Mortazavian SMM, Huigen DJ, Evenhuis B, Kessel G, Visser RGF, Jacobsen E, Vossen JH (2012) Broad spectrum late blight resistance in potato differential set plants MaR8 and MaR9 is conferred by multiple stacked R genes. Theor Appl Genet 124:923–935
Lindhout P, Meijer D, Schotte T, Hutten RCB, Visser RGF, vanEck HJ (2011) Towards F1 hybrid seed potato breeding. Potato Res 54:301–312
MacKay G (2005) Propagation by traditional breeding methods. In: Razdan M, Mattoo A (eds) Genetic improvement of Solanaceae crops, volume 1, potato. Science Publishers, Inc., Enfield, pp 65–81
Mikami M, Toki S, Endo M (2015) comparison of CRISPR/Cas9 expression constructs for efficient targeted mutagenesis in rice. Plant Mol Biol 88:561–572
Nicola A et al (2015) Targeted gene mutation in tetraploid potato through transient TALEN expression in protoplasts. J Biotechnol 204:17–24
Otto SP (2007) The evolutionary consequences of polyploidy. Cell 131:452–462
Ovchinnikova A, Krylova E, Gavrilenko T, Smekalova T, Zhuk M, Knapp S, Spooner DM (2011) Taxonomy of cultivated potatoes (Solanum section Petota: Solanaceae). Bot J Linn Soc 165:107–155
Phumichai C, Mori M, Kobayashi A, Kamijima O, Hosaka K (2005) Toward the development of highly homozygous diploid potato lines using the self-compatibility controlling Sli gene. Genome 48:977–984
Pushkarnath (1976) Potato in sub-tropics. Orient Longman Ltd., New Delhi, p 289
Rodriguez FE, Douches D, Lopez-Cruz M, Coombs J, de los Campos G (2018) Genomic Selection for Late Blight and Common Scab Resistance in Tetraploid Potato (Solanum tuberosum). G3 Genes Genomes Genet 8:2471–2481
Rowe PR (1967) Performance and variability of diploid and tetraploid potato families. Am Potato J 44:263–271
Sanford JC (1983) Ploidy manipulations. In: Moore JN, Janick J (eds) Methods in fruit breeding. Purdue University Press, Purdue, pp 100–123
Sawai S et al (2014) Sterol side chain reductase 2 is key enzyme in the biosynthesis of cholesterol, the common precursor of toxic steroidal glycoalkaloids in potato. Plant Cell 26:3763–3774
Simmonds N (1997) A review of potato propagation by means of seed, as distinct from clonal propagation by tubers. Euphytica 40:191–214
Slater AT, Cogan NOI, Forster JW, Hayes BJ, Daetwyler HD (2016) Improving genetic gain with genomic selection in autotetraploid potato. Plant Genome 9:3
Spooner DM (2016) Species delimitations in plants: lessons learned from potato taxonomy by a practicing taxonomist. J Syst Evol 54:191–203
Spooner DM, Nunez J, Trujillo G, Herrera MDR, Guzman F, Ghislain M, Nunez J, del Rosario HM, Guzma F (2007) Extensive simple sequence repeat genotyping of potato landraces supports a major re-evaluation of their gene pool structure and classification. Proc Natl Acad Sci U S A 104:19398–19403
Spooner DM, Gavrilenko T, Jansky SH, Ovchinnikova A, Krylova E, Knapp S, Simon R (2010) Ecogeography of ploidy variation in cultivated potato (Solanum sect. Petota). Am J Bot 97:2049–2060
Stich B, Van Inghelandt D (2018) Prospects and potential uses of genomic prediction of key performance traits in tetraploid potato. Front Plant Sci 9:159. https://doi.org/10.3389/fpls.2018.00159
Sverrisdóttir E, Byrne S, Sundmark EHR, Johnsen HO, Kirk HG et al (2017) Genomic prediction of starch content and chipping quality in tetraploid potato using genotyping-by-sequencing. Theor Appl Genet 130:2091–2108
Sverrisdottir E, Sundmark EHR, Johnsen HO, Kirk HG, Asp T, Janss L, Bryan G, Nielsen KL (2018) The value of expanding the training population to improve genomic selection models in tetraploid potato. Front Plant Sci 9:1118. https://doi.org/10.3389/fpls.2018.01118
Ugent D (1970) The potato: what is the origin of this important crop plant, and how did it first become domesticated? Science 170:1161–1166
Uijtewaal BA, Jacobsen E, Hermsen JGT (1987) Morphology and vigour of monohaploid potato clones, their corresponding homozygous diploids and tetraploids and their heterozygous diploid parent. Euphytica 36:745–753
Veilleux R (1990) Solanum phureja: anther culture and the induction of haploids in a cultivated diploid potato species. In: Bajaj Y (ed) Biotechnology in agriculture and forestry 12: haploids in crop improvement I. Springer, New York, pp 530–543
Vos PG, Uitdewilligen J, Voorrips RE, Visser RGF, van Eck HJ (2015) Development and analysis of a 20K SNP array for potato (Solanum tuberosum): an insight into the breeding history. Theor Appl Genet 128:2387–2401
Wang S et al (2015) Efficient targeted mutagenesis in potato by the CRISPR/Cas9 system. Plant Cell Rep 34:1473–1476
Watanabe K, Orrillo M, Perez S, Crusado J (1996) Testing yield of diploid potato breeding lines for cultivar development. Breed Sci 46:245–249
Watson A, Ghosh S et al (2018) Speed breeding is a powerful tool to accelerate crop research and breeding. Nat Plants 4:23–29. https://doi.org/10.1038/s41477-017-0083-8
Witek K, Strzelczyk-Żyta D, Hennig J, Marczewski W (2006) A multiplex PCR approach to simultaneously genotype potato towards the resistance alleles Ry-f sto and ns. Mol Breed 18(3):273–275
Ye M, Peng Z, Tang D, Yang Z, Li D, Xu Y, Zhang C, Huang S (2018) Generation of self-compatible diploid potato by knockout of S-RNase. Nature Plants 4(9):651–654
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2020 Springer Nature Switzerland AG
About this chapter
Cite this chapter
Sood, S., Bhardwaj, V., Sundaresha, S. (2020). Major Paradigm Shifts in Potato Breeding. In: Gosal, S., Wani, S. (eds) Accelerated Plant Breeding, Volume 2. Springer, Cham. https://doi.org/10.1007/978-3-030-47298-6_1
Download citation
DOI: https://doi.org/10.1007/978-3-030-47298-6_1
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-47297-9
Online ISBN: 978-3-030-47298-6
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)