Abstract
The goal of strain-aware genome assembly is to reconstruct all individual haplotypes from a mixed sample at the strain level and to provide abundance estimates for the strains.
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References
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Baaijens, J.A., Stougie, L., Schönhuth, A. (2020). Strain-Aware Assembly of Genomes from Mixed Samples Using Flow Variation Graphs. In: Schwartz, R. (eds) Research in Computational Molecular Biology. RECOMB 2020. Lecture Notes in Computer Science(), vol 12074. Springer, Cham. https://doi.org/10.1007/978-3-030-45257-5_14
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