Skip to main content

Fast Contextual View Generation in 3D Medical Images Using a 3D Widget User Interface and Super-Ellipsoids

  • Conference paper
  • First Online:
Advances in Visual Computing (ISVC 2019)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 11845))

Included in the following conference series:

  • 1400 Accesses

Abstract

This paper presents a 3D widget user interface (UI), super-ellipsoid shape primitives and a customized volume rendering algorithm that together create an effective system for generating contextual views in 3D medical images. The widget UI supports the fast and precise positioning of a super-ellipsoid “paint blob”. The paint blob can be deposited and automatically blended with previously deposited blobs to form an arbitrarily complex-shaped region of interest (ROI) enclosing target image features. The rendering of these “focus” regions can be controlled separately from the surrounding contextual region, allowing medical experts to examine and measure image features relative to the surrounding structures, regardless of the level of occlusion. The system’s core algorithms execute in parallel on graphics processing units, resulting in real-time interaction and high-quality visualizations. The focus plus context visualization system is validated via a user study and a series of experiments.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 69.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 89.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Notes

  1. 1.

    Several videos of the tools comprising the technique can be viewed at https://www.youtube.com/watch?v=NsgipyU1lfQ&list=PLtEweT4itM8Ef2D9HLQDAKu6G1Ou1Q3Yr&index=1.

References

  1. Ljung, P., Kruger, J.H., Groller, E., Hadwiger, M., Hansen, C.D., Ynnerman, A.: State of the art in transfer functions for direct volume rendering. Comput. Graph. Forum 35, 669–691 (2016)

    Article  Google Scholar 

  2. Faynshteyn, L., McInerney, T.: Context-preserving volumetric data set exploration using a 3D painting metaphor. In: Bebis, G., et al. (eds.) ISVC 2012. LNCS, vol. 7431, pp. 336–347. Springer, Heidelberg (2012). https://doi.org/10.1007/978-3-642-33179-4_33

    Chapter  Google Scholar 

  3. Kriger, J., Schneider, J., Westermann, R.: ClearView: an interactive context preserving hotspot visualization technique. IEEE Trans. Vis. Comput. Graph. 12(5), 941–948 (2006)

    Article  Google Scholar 

  4. Bruckner, S., Grimm, S., Kanitsar, A., Gröller, M.E.: Illustrative context-preserving exploration of volume data. IEEE Trans. Vis. Comput. Graph. 12(6), 1559–1569 (2006)

    Article  Google Scholar 

  5. Tappenbeck, A., Preim, B., Dicken, V.: Distance-based transfer function design: specification methods and applications. In: Simulation and Visualization (2006)

    Google Scholar 

  6. Zhou, J., Döring, A., Tönnies, K.: Distance based enhancement for focal region based volume rendering. In: Tolxdorff, T., Braun, J., Handels, H., Horsch, A., Meinzer, H.P. (eds.) Bildverarbeitung für die Medizin 2004. Springer, Berlin (2004). https://doi.org/10.1007/978-3-642-18536-6_41

    Chapter  Google Scholar 

  7. Monclus, E., Dıaz, J., Navazo, I., Vazquez, P.P.: The virtual magic lantern: an interaction metaphor for enhanced medical data inspection. In: The 16th ACM Symposium on Virtual Reality Software and Technology, Kyoto, Japan (2009)

    Google Scholar 

  8. Luo, Y., Iglesias Guitián, J.A., Gobbetti, E., Marton, F.: Context preserving focal probes for exploration of volumetric medical datasets. In: Magnenat-Thalmann, N. (ed.) 3DPH 2009. LNCS, vol. 5903, pp. 187–198. Springer, Heidelberg (2009). https://doi.org/10.1007/978-3-642-10470-1_16

    Chapter  Google Scholar 

  9. Ropinski, T., Steinicke, F., Hinrichs, K.: Tentative results in focus-based medical volume visualization. In: Butz, A., Fisher, B., Krüger, A., Olivier, P. (eds.) SG 2005. LNCS, vol. 3638, pp. 218–221. Springer, Heidelberg (2005). https://doi.org/10.1007/11536482_19

    Chapter  Google Scholar 

  10. Bruckner, S., Gröller, M.: Volumeshop: an interactive system for direct volume illustration. In: 16th IEEE Conference on Visualization (VIS 2005), Baltimore, MD (2005)

    Google Scholar 

  11. Radeva, N., Levy, L., Hahn, J.: Generalized temoral focus + context framework for improved medical data exploration. J. Digit. Imaging 27, 207–219 (2014)

    Article  Google Scholar 

  12. Chen, H., Samavati, F., Sousa, M.: GPU-based point radiation for interactive volume sculpting and segmentation. Vis. Comput. 24(7), 689–698 (2008)

    Article  Google Scholar 

  13. LiveVolume. www.livevolume.com. Accessed 01 June 2017

  14. Lagos, K.: Fast contextual view generation and region of interest selection in 3D medical images via superellipsoid manipulation, blending and constrained region growing. Master’s thesis, Department of Computer Science, Ryerson University, Toronto, ON, Canada (2019)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Tim McInerney .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Lagos, K., McInerney, T. (2019). Fast Contextual View Generation in 3D Medical Images Using a 3D Widget User Interface and Super-Ellipsoids. In: Bebis, G., et al. Advances in Visual Computing. ISVC 2019. Lecture Notes in Computer Science(), vol 11845. Springer, Cham. https://doi.org/10.1007/978-3-030-33723-0_37

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-33723-0_37

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-33722-3

  • Online ISBN: 978-3-030-33723-0

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics