Skip to main content

Manual Segmentation Errors in Medical Imaging. Proposing a Reliable Gold Standard

  • Conference paper
  • First Online:
Applied Informatics (ICAI 2019)

Abstract

Manual segmentation is ubiquitous in modern medical imaging. It is a tedious and time-consuming process that is also operator-dependent and due to its low reproducibility, presents to specialist a challenge to reach consensus when diagnosing from an image. In the diagnosis of several abnormalities, geometrical features such as distances, curvatures, volumes, areas, and shapes are used to derive verdicts. These features are only quantifiable if the measuring structures can be separated from other elements in the image. The process of manual segmentation provides the analysis with a response to the question of the limits, and those limits are not easy to identify. Despite all the mentioned drawbacks, manual segmentation is still used in medical imaging analysis or employed to validate automatic or semi-automatic methods. Intending to quantify the operator variability of the process, we have created a controlled environment and run segmentations on known volumes scanned with Magnetic Resonance. The strategy proposed here suggests a mechanism to establish gold standards for geometrical readings in medical imaging; thus measuring instruments can be analyzed and certified for the task.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  1. Bae, K.T., Giger, M.L., Chen, C.-T., Kahn Jr., C.E.: Automatic segmentation of liver structure in ct images. Med. Phys. 20, 71–78 (1993)

    Article  Google Scholar 

  2. Dyjack, D.T., Levine, S.P.: Development of an ISO 9000 compatible occupational health standard: defining the issues. Am. Ind. Hyg. Assoc. J. 56, 599–609 (1995)

    Article  Google Scholar 

  3. Admiraal-Behloul, F., et al.: Fully automatic segmentation of white matter hyperintensities in MR images of the elderly. NeuroImage 28, 607–617 (2005)

    Article  Google Scholar 

  4. Fenster, A., Chiu, B.: Evaluation of segmentation algorithms for medical imaging. IEEE EMB, January 2006

    Google Scholar 

  5. Duca, D., Riva, G., Foppa, E., Toscano, P.G.: Wood pellet quality with respect to EN 14961–2 standard and certifications. Fuel 135, 9–14 (2014)

    Article  Google Scholar 

  6. Fukuda, Y., Terada, Y., Yoshioka, H., Yu, H.J., Chang, A.: Comparative study of intra-operator variability in manual and semi-automatic segmentation of knee cartilage. Abstr./Osteoarthr. Cartil. 24, 296–297 (2016)

    Article  Google Scholar 

  7. Jovanović, B., Filipović, J.: ISO 50001 standard-based energy management maturity model-proposal and validation in industry. J. Clean. Prod. 112, 2744–2755 (2016)

    Article  Google Scholar 

  8. Kim, H., et al.: Quantitative evaluation of image segmentation incorporating medical consideration functions. Med. Phys. 42(6), 3013–3023 (2015)

    Article  Google Scholar 

  9. Moeskops, P., Viergever, M.A., Mendrik, A.M., de Vries, L.S., Benders, M.J.N.L., Išgum, I.: Automatic segmentation of MR brain images with a convolutional neural network. Fuel 9–14 (2014)

    Google Scholar 

  10. Pohle, R., Toennies, K.D.: Segmentation of medical images using adaptive region growing. In: Proceedings of Medical Imaging, vol. 4322, July 2001

    Google Scholar 

  11. Rana, M., et al.: Development and evaluation of an automatic tumor segmentation tool: a comparison between automatic, semi-automatic and manual segmentation of mandibular odontogenic cysts and tumors. J. Cranio-Maxillo-Fac. Surg. 43, 355–359 (2015)

    Article  Google Scholar 

  12. Wei, W., Ramalho, O., Mandin, C.: Indoor air quality requirements in green building certifications. Build. Environ. 92, 10–19 (2015)

    Article  Google Scholar 

  13. Yan, P., Kassim, A.A.: Medical image segmentation using minimal path deformable models with implicit shape priors. In: IEEE EMB, October 2006

    Google Scholar 

  14. Yao, J., Warren, S.: Applying the ISO/IEEE 11073 standards to wearable home health monitoring systems. J. Clin. Monit. Comput. 19, 427–436 (2005)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Fernando Yepes-Calderon .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Yepes-Calderon, F., Gordon McComb, J. (2019). Manual Segmentation Errors in Medical Imaging. Proposing a Reliable Gold Standard. In: Florez, H., Leon, M., Diaz-Nafria, J., Belli, S. (eds) Applied Informatics. ICAI 2019. Communications in Computer and Information Science, vol 1051. Springer, Cham. https://doi.org/10.1007/978-3-030-32475-9_17

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-32475-9_17

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-32474-2

  • Online ISBN: 978-3-030-32475-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics