Skip to main content
SpringerLink
Log in

Mungbean Genome and Synteny with Other Genomes

  • Chapter
  • First Online:
The Mungbean Genome

Part of the book series: Compendium of Plant Genomes ((CPG))

  • 520 Accesses

Abstract

Mungbean (Vigna radiata (L.) R. Wilczek var. radiata) is an important source of protein and carbohydrate in Asia. Despite its importance in the diet of the world’s populace, genetic and genomic information of mungbean had been scarce compared to other legumes such as soybean or chickpea. The publication of mungbean reference genome sequence in 2014 has allowed diverse genetic and genomic studies in mungbean and its close relative legume species. The genome of adzuki bean (Vigna angularis) has been sequenced and assembled using the synteny relationship with mungbean genome and genetic information in soybean has been transferred to mungbean genome through translational genomics approach. Within a relatively short period time, a large amount of genetic and genomic resources has been accumulated in mungbean. To make use of the information and develop genomics-based breeding programs, it is essential to construct a data hub to share the information. Strong genomic resources and databases will accelerate mungeban breeding programs in the near future.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Log in via an institution
Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • An YC, Goettel W, Han Q et al (2017) Dynamic changes of genome-wide dna methylation during soybean seed development. Sci Rep 7:12263

    Article  Google Scholar 

  • Bertioli DJ, Cannon SB, Froenicke L et al (2015) The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut. Nat Genet 47:438

    Google Scholar 

  • Burton JN, Adey A, Patwardhan RP et al (2013) Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions. Nat Biotechnol 31:1119

    Article  CAS  Google Scholar 

  • Cao D, Li H, Yi J et al (2011) Antioxidant properties of the mung bean flavonoids on alleviating heat stress. PLoS ONE 6:e21071

    Article  CAS  Google Scholar 

  • Chen H, Wang L, Wang S et al (2015) Transcriptome sequencing of mung bean (Vigna radiata L.) genes and the identification of EST-SSR markers. PLoS One 10:e0120273

    Article  Google Scholar 

  • Chen J, Somta P, Chen X et al (2016) Gene mapping of a mutant mungbean (Vigna radiata L.) using new molecular markers suggests a gene encoding a yuc4-like protein regulates the chasmogamous flower trait. Front Plant Sci 7:830

    Google Scholar 

  • Cheng C, Krishnakumar V, Chan AP et al (2017) Araport11: a complete reannotation of the Arabidopsis thaliana reference genome. Plant J 89:789–804

    Article  CAS  Google Scholar 

  • DeYoung BJ, Innes RW (2006) Plant NBS-LRR proteins in pathogen sensing and host defense. Nat Immunol 7:1243

    Article  CAS  Google Scholar 

  • Do Kim K, Shin JH, Van K et al (2009) Dynamic rearrangements determine genome organization and useful traits in soybean. Plant Physiol 151:1066–1076

    Article  Google Scholar 

  • Islam A, Blair MW (2018) Molecular Characterization of mung bean Germplasm from the USDA Core Collection Using Newly Developed KASP-based SNP Markers. Crop Sci

    Google Scholar 

  • Jiao K, Li X, Guo Y et al (2019) Regulation of compound leaf development in mungbean (Vigna radiata L.) by CUP-SHAPED COTYLEDON/NO APICAL MERISTEM (CUC/NAM) gene. Planta 1–10

    Google Scholar 

  • Kang YJ, Bae A, Shim S et al (2017) Genome-wide DNA methylation profile in mungbean. Sci Rep 7:40503

    Article  CAS  Google Scholar 

  • Kang YJ, Kim KH, Shim S et al (2012) Genome-wide mapping of NBS-LRR genes and their association with disease resistance in soybean. BMC Plant Biol 12:139

    Article  CAS  Google Scholar 

  • Kang YJ, Kim SK, Kim MY et al (2014) Genome sequence of mungbean and insights into evolution within Vigna species. Nat Commun 5:5443

    Article  CAS  Google Scholar 

  • Kang YJ, Satyawan D, Shim S et al (2015) Draft genome sequence of adzuki bean. Vigna angularis. Sci Rep 5:8069. https://doi.org/10.1038/srep08069

    Article  CAS  PubMed  Google Scholar 

  • Lestari P, Kim SK, Kang YJ et al (2014) Genetic diversity of mungbean (Vigna radiata L.) germplasm in Indonesia. Plant Genet Resour 12:S91–S94

    Article  Google Scholar 

  • Li S-W, Shi R-F, Leng Y (2015) De novo characterization of the mung bean transcriptome and transcriptomic analysis of adventitious rooting in seedlings using RNA-Seq. PLoS ONE 10:e0132969

    Article  Google Scholar 

  • Liu M-S, Kuo TC-Y, Ko C-Y et al (2016) Genomic and transcriptomic comparison of nucleotide variations for insights into bruchid resistance of mungbean (Vigna radiata [L.] R. Wilczek). BMC Plant Biol 16:46

    Google Scholar 

  • Muñoz-AmatriaĂ­n M, Mirebrahim H, Xu P et al (2017) Genome resources for climate-resilient cowpea, an essential crop for food security. Plant J 89:1042–1054

    Article  Google Scholar 

  • Paterson AH, Freeling M, Tang H, Wang X (2010) Insights from the comparison of plant genome sequences. Annu Rev Plant Biol 61:349–372

    Article  CAS  Google Scholar 

  • Sakai H, Naito K, Ogiso-Tanaka E et al (2015) The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome. Sci Rep 5:16780. https://doi.org/10.1038/srep16780

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Sangiri C, Kaga A, Tomooka N et al (2008) Genetic diversity of the mungbean (Vigna radiata, Leguminosae) genepool on the basis of microsatellite analysis. Aust J Bot 55:837–847

    Article  Google Scholar 

  • Sato S, Nakamura Y, Kaneko T et al (2008) Genome structure of the legume, Lotus japonicus. DNA Res 15:227–239

    Article  CAS  Google Scholar 

  • Schafleitner R, Nair RM, Rathore A et al (2015) The AVRDC–The World Vegetable Center mungbean (Vigna radiata) core and mini core collections. BMC Genom 16:344

    Article  Google Scholar 

  • Schmitz RJ, He Y, ValdĂ©s-LĂłpez O et al (2013) Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population. Genome Res

    Google Scholar 

  • Schmutz J, Cannon SB, Schlueter J et al (2010) Genome sequence of the palaeopolyploid soybean. Nature 463:178–183. https://doi.org/10.1038/nature08670

    Article  CAS  PubMed  Google Scholar 

  • Shen Y, Zhang J, Liu Y et al (2018) DNA methylation footprints during soybean domestication and improvement. Genome Biol 19:128

    Article  Google Scholar 

  • Srivastava R, Kumar S, Kobayashi Y et al (2018) Comparative genome-wide analysis of WRKY transcription factors in two Asian legume crops: Adzuki bean and Mung bean. Sci Rep 8:16971

    Article  Google Scholar 

  • Tian X, Li S, Liu Y, Liu X (2016) Transcriptomic profiling reveals metabolic and regulatory pathways in the desiccation tolerance of Mungbean (Vigna radiata [L.] R. Wilczek). Front Plant Sci 7:1921

    Google Scholar 

  • Varshney RK, Chen W, Li Y et al (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nat Biotechnol 30:83

    Article  CAS  Google Scholar 

  • Varshney RK, Song C, Saxena RK et al (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat Biotechnol 31:240

    Article  CAS  Google Scholar 

  • Young ND, DebellĂ© F, Oldroyd GE et al (2011) The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature 480:520

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Division of Applied Life Science Department, Gyeongsang National University, PMBBRC, Jinju, 52828, Republic of Korea

    Yang Jae Kang

  2. Division of Life Science Department, Gyeongsang National University, Jinju, 52828, Republic of Korea

    Yang Jae Kang

  3. Department of Plant Science and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea

    Jungmin Ha

  4. Plant Genomics and Breeding Institute, Seoul National University, Seoul, 08826, Republic of Korea

    Jungmin Ha

Authors
  1. Yang Jae Kang
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. Jungmin Ha
    View author publications

    You can also search for this author in PubMed Google Scholar

Corresponding author

Correspondence to Jungmin Ha .

Editor information

Editors and Affiliations

  1. World Vegetable Center, ICRISAT Campus, Hyderabad, Telangana, India

    Ramakrishnan M. Nair

  2. World Vegetable Center, Shanhua, Tainan, Taiwan

    Roland Schafleitner

  3. College of Agriculture and Life Sciences, Seoul National University, Seoul, Korea (Republic of)

    Suk-Ha Lee

Rights and permissions

Reprints and permissions

Copyright information

© 2020 Springer Nature Switzerland AG

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Kang, Y.J., Ha, J. (2020). Mungbean Genome and Synteny with Other Genomes. In: Nair, R., Schafleitner, R., Lee, SH. (eds) The Mungbean Genome. Compendium of Plant Genomes. Springer, Cham. https://doi.org/10.1007/978-3-030-20008-4_9

Download citation

Publish with us

Policies and ethics

Search

Navigation