Term Selection for Query Expansion in Medical Cross-Lingual Information Retrieval
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Abstract
We present a method for automatic query expansion for cross-lingual information retrieval in the medical domain. The method employs machine translation of source-language queries into a document language and linear regression to predict the retrieval performance for each translated query when expanded with a candidate term. Candidate terms (in the document language) come from multiple sources: query translation hypotheses obtained from the machine translation system, Wikipedia articles and PubMed abstracts. Query expansion is applied only when the model predicts a score for a candidate term that exceeds a tuned threshold which allows to expand queries with strongly related terms only. Our experiments are conducted using the CLEF eHealth 2013–2015 test collection and show significant improvements in both cross-lingual and monolingual settings.
Notes
Acknowledgments
This work was supported by the Czech Science Foundation (grant n. 19-26934X).
References
- 1.Amati, G., Carpineto, C., Romano, G.: Query difficulty, robustness, and selective application of query expansion. In: McDonald, S., Tait, J. (eds.) ECIR 2004. LNCS, vol. 2997, pp. 127–137. Springer, Heidelberg (2004). https://doi.org/10.1007/978-3-540-24752-4_10CrossRefGoogle Scholar
- 2.Aronson, A.R.: Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program. In: Proceedings of AMIA Symposium, pp. 17–21 (2001)Google Scholar
- 3.Cao, G., Nie, J.Y., Gao, J., Robertson, S.: Selecting good expansion terms for pseudo-relevance feedback. In: Proceedings of the 31st Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, SIGIR 2008, pp. 243–250. ACM, New York (2008)Google Scholar
- 4.Chandra, G., Dwivedi, S.K.: Query expansion based on term selection for Hindi-English cross lingual IR. J. King Saud Univ. Comput. Inf. Sci. (2017)Google Scholar
- 5.Chiang, W.T.M., Hagenbuchner, M., Tsoi, A.C.: The wt10g dataset and the evolution of the web. In: Special Interest Tracks and Posters of the 14th International Conference on World Wide Web, WWW 2005, pp. 938–939. ACM, New York (2005)Google Scholar
- 6.Choi, S., Choi, J.: Exploring effective information retrieval technique for the medical web documents: Snumedinfo at clefehealth2014 task 3. In: Working Notes of CLEF 2015 - Conference and Labs of the Evaluation forum, vol. 1180, pp. 167–175. CEUR-WS.org, Sheffield (2014)Google Scholar
- 7.Dušek, O., Hajič, J., Hlaváčová, J., Novák, M., Pecina, P., Rosa, R., et al.: Machine translation of medical texts in the Khresmoi project. In: Proceedings of the Ninth Workshop on Statistical Machine Translation, pp. 221–228, Baltimore (2014)Google Scholar
- 8.Ermakova, L., Mothe, J.: Query expansion by local context analysis. In: Conference francophone en Recherche d’Information et Applications (CORIA 2016), pp. 235–250. CORIA-CIFED, Toulouse (2016)Google Scholar
- 9.Gabrilovich, E., Broder, A., Fontoura, M., Joshi, A., Josifovski, V., Riedel, L., Zhang, T.: Classifying search queries using the web as a source of knowledge. ACM Trans. Web 3(2), 5 (2009)CrossRefGoogle Scholar
- 10.Goeuriot, L., et al.: ShARe/CLEF eHealth evaluation lab 2014, Task 3: user-centred health information retrieval. In: Proceedings of CLEF 2014, pp. 43–61. CEUR-WS.org, Sheffield (2014)Google Scholar
- 11.Goeuriot, L., et al.: Overview of the CLEF eHealth evaluation lab 2015. In: Mothe, J., et al. (eds.) CLEF 2015. LNCS, vol. 9283, pp. 429–443. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-24027-5_44CrossRefGoogle Scholar
- 12.Harman, D.: Towards interactive query expansion. In: Proceedings of the 11th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, pp. 321–331. SIGIR 1988, ACM, New York (1988)Google Scholar
- 13.Harman, D.: Information retrieval. In: Relevance Feedback and Other Query Modification Techniques, pp. 241–263. Prentice-Hall Inc., Upper Saddle River (1992)Google Scholar
- 14.Hull, D.: Using statistical testing in the evaluation of retrieval experiments. In: Proceedings of the 16th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, pp. 329–338. ACM, Pittsburgh (1993)Google Scholar
- 15.Humphreys, B.L., Lindberg, D.A.B., Schoolman, H.M., Barnett, G.O.: The unified medical language system. J. Am. Med. Inform. Assoc. 5(1), 1–11 (1998)CrossRefGoogle Scholar
- 16.Kalpathy-Cramer, J., Muller, H., Bedrick, S., Eggel, I., De Herrera, A., Tsikrika, T.: Overview of the clef 2011 medical image classification and retrieval tasks. In: CLEF 2011 - Working Notes for CLEF 2011 Conference, vol. 1177. CEUR-WS (2011)Google Scholar
- 17.Koehn, P., Hoang, H., Birch, A., Callison-Burch, C., Federico, M., Bertoldi, N., et al.: Moses: open source toolkit for statistical machine translation. In: Proceedings of the 45th Annual Meeting of the Association for Computational Linguistics, Demo and Poster Sessions, pp. 177–180, Stroudsburg (2007)Google Scholar
- 18.Liu, X., Nie, J.: Bridging layperson’s queries with medical concepts - GRIUM @CLEF2015 eHealth Task 2. In: Working Notes of CLEF 2015 Conference and Labs of the Evaluation forum, vol. 1391. CEUR-WS.org, Toulouse (2015)Google Scholar
- 19.McCarley, J.S.: Should we translate the documents or the queries in cross-language information retrieval? In: Proceedings of the 37th Annual Meeting of the Association for Computational Linguistics on Computational Linguistics, pp. 208–214, College Park (1999)Google Scholar
- 20.Mikolov, T., Sutskever, I., Chen, K., Corrado, G., Dean, J.: Distributed representations of words and phrases and their compositionality. In: Proceedings of the 26th International Conference on Neural Information Processing Systems, NIPS 2013, vol. 2, pp. 3111–3119. Curran Associates Inc., Red Hook (2013)Google Scholar
- 21.Nikoulina, V., Kovachev, B., Lagos, N., Monz, C.: Adaptation of statistical machine translation model for cross-lingual information retrieval in a service context. In: Proceedings of the 13th Conference of the European Chapter of the Association for Computational Linguistics, pp. 109–119, Stroudsburg (2012)Google Scholar
- 22.Nogueira, R., Cho, K.: Task-oriented query reformulation with reinforcement learning. In: Proceedings of the 2017 Conference on Empirical Methods in Natural Language Processing, pp. 574–583 (2017)Google Scholar
- 23.Nunzio, G.M.D., Moldovan, A.: A study on query expansion with mesh terms and elasticsearch. IMS unipd at CLEF ehealth task 3. In: Working Notes of CLEF 2018 - Conference and Labs of the Evaluation Forum, Avignon, France, 10–14 September 2018. CEUR-WS, Avignon (2018)Google Scholar
- 24.Oard, D.W.: A comparative study of query and document translation for cross-language information retrieval. In: Farwell, D., Gerber, L., Hovy, E. (eds.) AMTA 1998. LNCS (LNAI), vol. 1529, pp. 472–483. Springer, Heidelberg (1998). https://doi.org/10.1007/3-540-49478-2_42CrossRefGoogle Scholar
- 25.Ounis, I., Amati, G., Plachouras, V., He, B., Macdonald, C., Johnson, D.: Terrier information retrieval platform. In: Losada, D.E., Fernández-Luna, J.M. (eds.) ECIR 2005. LNCS, vol. 3408, pp. 517–519. Springer, Heidelberg (2005). https://doi.org/10.1007/978-3-540-31865-1_37CrossRefGoogle Scholar
- 26.Pal, D., Mitra, M., Datta, K.: Improving query expansion using wordnet. J. Assoc. Inf. Sci. Technol. 65(12), 2469–2478 (2014)CrossRefGoogle Scholar
- 27.Palotti, J.R., Zuccon, G., Goeuriot, L., Kelly, L., Hanbury, A., Jones, G.J., Lu pu, M., Pecina, P.: CLEF eHealth Evaluation Lab 2015, Task 2: Retrieving information about medical symptoms. In: CLEF (Working Notes), pp. 1–22. Springer, Heidelberg (2015)Google Scholar
- 28.Pecina, P., Dušek, O., Goeuriot, L., Hajič, J., Hlavářová, J., Jones, G.J., et al.: Adaptation of machine translation for multilingual information retrieval in the medical domain. Artif. Intell. Med. 61(3), 165–185 (2014)CrossRefGoogle Scholar
- 29.Pedregosa, F., et al.: Scikit-learn: machine learning in Python. J. Mach. Learn. Res. 12, 2825–2830 (2011)MathSciNetzbMATHGoogle Scholar
- 30.Peng, Y., Wei, C.H., Lu, Z.: Improving chemical disease relation extraction with rich features and weakly labeled data. J. Cheminformatics 8(1), 53 (2016)CrossRefGoogle Scholar
- 31.Pennington, J., Socher, R., Manning, C.: Glove: global vectors for word representation. In: Proceedings of the 2014 Conference on Empirical Methods in Natural Language Processing (EMNLP), pp. 1532–1543 (2014)Google Scholar
- 32.Pirkola, A., Hedlund, T., Keskustalo, H., Järvelin, K.: Dictionary-based cross-language information retrieval: problems, methods, and research findings. Inform. Retrieval 4(3–4), 209–230 (2001)CrossRefGoogle Scholar
- 33.Rocchio, J.J.: Relevance feedback in information retrieval. The SMART Retrieval Syst. Exp. Autom. Doc. Process. 313–323 (1971)Google Scholar
- 34.Saleh, S., Pecina, P.: Reranking hypotheses of machine-translated queries for cross-lingual information retrieval. In: Fuhr, N., Quaresma, P., Gonçalves, T., Larsen, B., Balog, K., Macdonald, C., Cappellato, L., Ferro, N. (eds.) CLEF 2016. LNCS, vol. 9822, pp. 54–66. Springer, Cham (2016). https://doi.org/10.1007/978-3-319-44564-9_5CrossRefGoogle Scholar
- 35.Saleh, S., Pecina, P.: Task3 patient-centred information retrieval: Team CUNI. In: Working Notes of CLEF 2016 - Conference and Labs of the Evaluation forum. CEUR-WS.org, Evora (2016)Google Scholar
- 36.Saleh, S., Pecina, P.: An Extended CLEF eHealth Test Collection for Cross-lingual Information Retrieval in the medical domain. In: Advances in Information Retrieval - 41th European Conference on IR Research, ECIR 2019, Cologne, Germany, April 14–18, 2019, Proceedings. Lecture Notes in Computer Science, Springer (2019)Google Scholar
- 37.Smucker, M.D., Allan, J.: An investigation of Dirichlet prior smoothing’s performance advantage. University of Massachusetts, Technical report (2005)Google Scholar
- 38.Suominen, H., et al.: Overview of the ShARe/CLEF eHealth evaluation lab 2013. In: Forner, P., Müller, H., Paredes, R., Rosso, P., Stein, B. (eds.) CLEF 2013. LNCS, vol. 8138, pp. 212–231. Springer, Heidelberg (2013). https://doi.org/10.1007/978-3-642-40802-1_24CrossRefGoogle Scholar
- 39.Wright, T.B., Ball, D., Hersh, W.: Query expansion using mesh terms for dataset retrieval: OHSU at the biocaddie 2016 dataset retrieval challenge. J. Biol. Databases Curation 2017, Database (2017)Google Scholar
- 40.Zamani, H., Croft, W.B.: Embedding-based query language models. In: Proceedings of the 2016 ACM International Conference on the Theory of Information Retrieval, ICTIR 2016, pp. 147–156. ACM, New York (2016)Google Scholar
- 41.Zamani, H., Croft, W.B.: Relevance-based word embedding. In: Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval, pp. 505–514. SIGIR 2017. ACM, New York (2017)Google Scholar
- 42.Zuccon, G., Koopman, B., Bruza, P., Azzopardi, L.: Integrating and evaluating neural word embeddings in information retrieval. In: Proceedings of the 20th Australasian Document Computing Symposium, p. 12. Stroudsburg (2015)Google Scholar