Skip to main content

Climate Change and Rapidly Evolving Pests and Diseases in Southern Africa

  • Chapter
  • First Online:
New Frontiers in Natural Resources Management in Africa

Abstract

Agriculture faces the huge challenge of meeting increasing food demands while simultaneously reducing its environmental footprint and meeting sustainability goals. Climate change is a major risk to sub-Saharan Africa and the southern Africa region. Pests are, and will continue to be responsible for crop losses which may amount to more than 40% worldwide. Climate change and weather patterns directly affect the distribution, development and population dynamics of insect pests and it may facilitate the spread of indigenous and exotic species. The aim of the study was to identify and evaluate major pests of vegetables in South Africa and Zimbabwe in relation to climate variability. Quantitative and qualitative research methods were used to solicit data from respondents. This was done across all nine provinces of South Africa and five agro-ecological zones in Zimbabwe. Key informants and focus groups were used to triangulate the data. Whiteflies and aphids collected from field and greenhouse sampling sites were phenotyped to determine the possible species present. In Zimbabwe, farmers perceived an increase in the abundance of insect pests such as aphids, whiteflies, stem borers, ball worms, red spider mite, termites and diamondback moths and the emergence of new pests. The increase in pest populations was perceived to be caused by short winters, higher temperatures and lengthy dry spells. In South Africa, the major pest outbreaks were aphids, whiteflies, red spider mites and thrips. Moreover, some of these pests are vectors of destructive viral pathogens. Emerging whitefly-transmitted torrado, crini, and begomoviruses were identified in major vegetable growing regions throughout South Africa. From this study, Tomato torrado virus (ToTV) was reported for the first time from continental Africa continent. In addition, several weed species significantly contributed to the epidemiology of vector-borne disease in commercial and smallholder farming communities. Preliminary risk maps for possible pest and disease outbreaks were produced for the two countries. The major policy directions require governments in Africa to start documenting new and emerging pests and diseases of major crops. Furthermore, surveillance systems should be initiated to monitor pest populations and extension programs that create awareness to farmers on new and existing pests and how to manage them. A collaborative effort is paramount for the development of appropriate integrated pest management systems to reduce the losses incurred by the agricultural pests in Africa and abroad.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 109.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD 139.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • Accotto, GP, Navas-Castillo, J, Noris, E, Moriones, E, Louro, D (2000). Typing of Tomato yellow leaf curl viruses in Europe. European Journal of Plant Pathology 106(2):179–186.

    Article  Google Scholar 

  • Asala, S, Alegbejo, MD, Kashina, BD, Banwo, OO, Shinggu, CP (2014). Viruses in weeds in Dioscorea yam fields in Nigeria. African Crop Science Journal 22(2):109–115.

    Google Scholar 

  • Ben Khalifa, M, Simon, V, Marrakchi, M et al (2009). Contribution of host plant resistance and geographic distance to the structure of Potato virus Y (PVY) populations in pepper in northern Tunisia. Plant Pathology 58:763–772.

    Article  Google Scholar 

  • Calatayud, PA, Le Ru, BP, van den Berg, J, Schulthess, BF (2014). Ecology of the African Maize Stalk Borer, Busseola fusca (Lepidoptera: Noctuidae) with Special Reference to Insect-Plant Interaction. Insects 5:539–563.

    Article  Google Scholar 

  • Chen, J, Chen, J, Adams, MJ (2001) A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family. Archives of Virology 146:757–766.

    Article  Google Scholar 

  • Chen, TC, Li, JT, Lin, YP et al (2012) Genomic characterization of Calla lily chlorotic spot virus and design of broad spectrum primers for detection of tospoviruses. Plant Pathology 61:183–194.

    Article  Google Scholar 

  • Clements, DR, DiTommaso, A, Hyvönen, T (2014) Ecology and management of weeds in a changing climate. In: Recent Advances in Weed Management. Chauhan, BS, Mahajan, G (eds). Springer Science. New York, United States.

    Google Scholar 

  • Comoe, R, Siegrist, M (2015) Relevant drivers of farmers’ decision behavior regarding their adaptation to climate change: a case study of 2 regions in Cote d’Ivore. Mitigation and Adaptation Strategies for Global Change 20:179–199.

    Article  Google Scholar 

  • Fernandes, FR, de Albuquerque, LC, de Britto Giordano, L et al (2008). Diversity and prevalence of Brazilian bipartite begomovirus species associated to tomatoes. Virus Genes 36:251–258.

    Article  Google Scholar 

  • Goyal, G, Gill, HK, McSorley, R (2015) Common weed hosts of insect-transmitted viruses of Florida vegetable crops. UF/IFAS Extension. ENY-863. University of Florida, United States. http://edis.ifas.ufl.edu.

    Google Scholar 

  • Gregory, P.J., Johnson, S.N., Newton, A.C., & Ingram, J.S.I. (2009). Integrating pests and pathogens into the climate change/food security debate. Journal of Experimental Botany 60:2827–2838. https://doi.org/10.1093/jxb/erp080.

    Article  Google Scholar 

  • Karavina, C, Gubba, A (2016). Amaranthus sp. and Eleusine indica are natural hosts of Iris yellow spot virus in Zimbabwe. Plant Disease https://doi.org/10.1094/PDIS-05-16-0652-PDN.

    Article  Google Scholar 

  • Karavina, C, Ibaba, JD, Gubba, A (2016a). First Report of Iris yellow spot virus Infecting Onion in Zimbabwe. Plant Disease 100(1):235.

    Article  Google Scholar 

  • Karavina, C., Ibaba, J.D., Gubba, A. and Pappu, H.R. (2016b). First Report of Iris yellow spot virus Infecting Garlic and Leek in Zimbabwe. Plant Disease 100(3):657.

    Article  Google Scholar 

  • Karavina, C, Ximba, S, Ibaba, JD, and Gubba, A (2016c). First report of a mixed infection of Potato virus Y and Tomato spotted wilt virus on pepper (Capsicum annuum) in Zimbabwe. Plant Disease 100(7):1513.

    Article  Google Scholar 

  • Karavina, C, Ibaba, JD, Gubba, A (2016d). First report of Tomato spotted wilt virus infecting butternut squash (Cucurbita moschata Duch.) in Zimbabwe. Plant Disease 100(4):870.

    Article  Google Scholar 

  • Katsaruware-Chapoto RD, Mafongoya PL and Gubba A. (2017) Responses of Insect Pests and Plant Diseases to Changing and Variable Climate: A Review Journal of Agricultural Science 9:160–168.

    Article  Google Scholar 

  • Kisten, L, Moodley, V, Gubba, A, Mafongoya, PL (2016) First Detection of (TSWV) on in South Africa. Plant Disease 100(10):2176–2176.

    Article  Google Scholar 

  • Kisten, L, Moodley, V, Gubba, A, Mafongoya, PL (2016a) First Detection of Tomato spotted wilt virus (TSWV) on Amaranthus thunbergii in South Africa. Plant Disease 100(7):2176.

    Article  Google Scholar 

  • Kisten, L, Moodley, V, Gubba, A, Mafongoya, PL (2016b) First Report of Potato Virus Y (PVY) on Physalis peruviana in South Africa. Plant Disease 100(7):1511.

    Article  Google Scholar 

  • Ibaba, JD, Gubba, A (2011) Diversity of Potato Virus Y isolates infecting solanaceous vegetables in the province of KwaZulu-Natal in the Republic of South Africa. Crop Protection 30(11):1404–1408.

    Article  Google Scholar 

  • IPCC (2007) Climate Change 2007: Synthesis Report. Contribution of Working Groups I, II and III to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change [Core Writing Team, Pachauri, R.K and Reisinger, A. (eds.)]. IPCC, Geneva, Switzerland, 104 pp.

    Google Scholar 

  • Kladiviko, EJ, Savabi, MR, Golabi, AA (2008) Infiltration characteristics of no till vs. conventional tillage in Indiana and Illinois farm fields. In Goddard, T Zoebisch, MA, Gan, YT et al. (eds) No-till farming systems Special publication No. 3. pp. 289–300. World Association of Soil and Water Conservation, Bangkok.

    Google Scholar 

  • Kwon, S, Choi, G, Yoon, J et al (2016) Identification of Leonurus sibiricusas a weed reservoir for three pepper-infecting viruses. Plant Pathology Journal 32(1):65–69.

    Article  Google Scholar 

  • Menace, L, Colson, G, Rafaelli, R (2015) Climate change beliefs and perceptions of agricultural risks: An application of the exchangeability method. Global Environmental Change 35:70–81.

    Article  Google Scholar 

  • Moodley, V, Ibaba, JD, Naidoo, R, Gubba, A (2014) Full-genome analyses of a Potato virus Y (PVY) isolate infecting pepper (Capsicum annuum L.) in the Republic of South Africa. Virus Genes 49:466–476.

    Article  Google Scholar 

  • Moodley, V, Gubba, A, Mafongoya, PL (2016a). First Report of Tomato torrado virus on Tomato (Solanum lycopersicum) in South Africa. Plant disease 100(1):231.

    Article  Google Scholar 

  • Moodley, V, Gubba, A, Mafongoya, PL (2016b) Occurrence of Tomato chlorosis virus (ToCV) on Datura stramonium Near Tomato Crops (Solanum lycopersicum) in South Africa. Plant disease 100(7):1512.

    Article  Google Scholar 

  • Nhamo, N (2007) The contribution of different fauna communities to improved soil health: A case of Zimbabwean soils under conservation agriculture. PhD. thesis, University of Bonn, Ecology and Development Series 56:131.

    Google Scholar 

  • Oerke, EC (2006) Crop Losses to Pests. Journal of Agricultural Science 144:31–43.

    Article  Google Scholar 

  • Padalia, H, Srivastava, V, Kushwaha, SPS (2015). How climate change might influence the potential distribution of weed, bushmint (Hyptis suaveolens). Environmental Monitoring and Assessment 187:210.

    Article  Google Scholar 

  • Peters, K, Breitsameter, L, Gerowitt, B (2014) Impact of climate change on weeds in agriculture: a review. Agronomy for Sustainable Development 34:707–721.

    Article  Google Scholar 

  • Prajapat, R, Marwal, A, Gaur, RK (2014). Begomovirus associated with alternative host weeds: A critical appraisal. Archives of Phytopathology and Plant Protection 47(2):157–170.

    Article  Google Scholar 

  • ReliefWeb. (2015). Southern Africa Humanitarian Outlook 2015/2016: Special Focus on El Niño – World | ReliefWeb. Retrieved January 25, 2016, from http://reliefweb.int/report/world/southern-africa-humanitarian-outlook-20152016-special-focus-el-ni-o

    Google Scholar 

  • Selvaraj, G, Pandiara, T, (2013) Potential impacts of recent climate change on biological control agents in agro-ecosystem: A review. International Journal of Biodiversity and Conservation 5(12):845–852.

    Google Scholar 

  • Sharma, KC, Bhardwaj, SC, Sharma (2011). Systematic studies, life history and infestation by Helicoverpa armigera on tomato in semi-arid region of Rajastan. Biological Forum – An International Journal 3(1):52–56.

    Google Scholar 

  • Tamura K, Stecher G, Peterson D et al (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution 30: 2725–2729.

    Article  Google Scholar 

  • Van Bogaert, N, Smagghe, G, De Jonghe, K (2015). The role of weeds in the epidemiology of pospiviroids. Weed Research 55:631–638.

    Article  Google Scholar 

  • Verbeek, M, Tang, J, Ward, LI (2012). Two generic PCR primer sets for the detection of members of the genus Torradovirus. Journal of Virological Methods 185:184–188.

    Article  Google Scholar 

  • Wintermantel, WM, Hladky, LL (2010). Methods for detection and differentiation of existing and new crinivirus species through multiplex and degenerate primer RT-PCR. Journal of Virological Methods 170:106–114.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Mafongoya, P., Gubba, A., Moodley, V., Chapoto, D., Kisten, L., Phophi, M. (2019). Climate Change and Rapidly Evolving Pests and Diseases in Southern Africa. In: Ayuk, E., Unuigbe, N. (eds) New Frontiers in Natural Resources Management in Africa. Natural Resource Management and Policy, vol 53. Springer, Cham. https://doi.org/10.1007/978-3-030-11857-0_4

Download citation

Publish with us

Policies and ethics